RNA–Protein interactions for RNA: ENST00000540351.1

UBC-207, Transcript of ubiquitin C, humanhuman

TSL 1 (best)

Gene UBC, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-207ENST00000540351 NISCHQ9Y2I1 1504 aa33.52■■■□□ 2.96
UBC-207ENST00000540351 ABCC9O60706 1549 aa30.7■■■□□ 2.51
UBC-207ENST00000540351 CCDC180Q9P1Z9 1646 aa30.25■■■□□ 2.43
UBC-207ENST00000540351 DNAJC5BQ9UF47 199 aa29.42■■■□□ 2.3
UBC-207ENST00000540351 RB1CC1Q8TDY2 1594 aa28.99■■■□□ 2.23
UBC-207ENST00000540351 NACADO15069 1562 aa28.72■■■□□ 2.19
UBC-207ENST00000540351 PABPN1Q86U42 306 aaKnown RBP eCLIP28.49■■■□□ 2.15
UBC-207ENST00000540351 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
UBC-207ENST00000540351 BICRAQ9NZM4 1560 aa28.34■■■□□ 2.13
UBC-207ENST00000540351 MYO15BQ96JP2 1530 aa28.26■■■□□ 2.11
UBC-207ENST00000540351 DCAF8L2P0C7V8 631 aa28.21■■■□□ 2.11
UBC-207ENST00000540351 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.04
UBC-207ENST00000540351 CC2D2AQ9P2K1 1620 aa27.75■■■□□ 2.03
UBC-207ENST00000540351 CECR2Q9BXF3 1484 aa27.72■■■□□ 2.03
UBC-207ENST00000540351 DCAF1Q9Y4B6 1507 aa27.71■■■□□ 2.03
UBC-207ENST00000540351 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.02
UBC-207ENST00000540351 EIF4G1Q04637 1599 aaKnown RBP27.59■■■□□ 2.01
UBC-207ENST00000540351 SCRIBQ14160 1630 aa27.48■■□□□ 1.99
UBC-207ENST00000540351 DNAJC5Q9H3Z4 198 aa27.29■■□□□ 1.96
UBC-207ENST00000540351 CUX2O14529 1486 aa26.69■■□□□ 1.86
UBC-207ENST00000540351 NCAPD3P42695 1498 aa26.59■■□□□ 1.85
UBC-207ENST00000540351 ERCC6Q03468 1493 aa26.43■■□□□ 1.82
UBC-207ENST00000540351 ATAD2BQ9ULI0 1458 aa26.42■■□□□ 1.82
UBC-207ENST00000540351 HMGXB3Q12766 1538 aa26.3■■□□□ 1.8
UBC-207ENST00000540351 NESP48681 1621 aa26.3■■□□□ 1.8
UBC-207ENST00000540351 SMARCA4P51532 1647 aa26.23■■□□□ 1.79
UBC-207ENST00000540351 SMARCA2P51531 1590 aa26.23■■□□□ 1.79
UBC-207ENST00000540351 THOC2Q8NI27 1593 aaKnown RBP26.16■■□□□ 1.78
UBC-207ENST00000540351 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
UBC-207ENST00000540351 BAZ1BQ9UIG0 1483 aaKnown RBP26.03■■□□□ 1.76
UBC-207ENST00000540351 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
UBC-207ENST00000540351 BAZ1AQ9NRL2 1556 aaPredicted RBP25.98■■□□□ 1.75
UBC-207ENST00000540351 KIF21AQ7Z4S6 1674 aa25.9■■□□□ 1.74
UBC-207ENST00000540351 MROH2BQ7Z745 1585 aa25.83■■□□□ 1.73
UBC-207ENST00000540351 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
UBC-207ENST00000540351 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
UBC-207ENST00000540351 TRIM41Q8WV44 630 aa25.68■■□□□ 1.7
UBC-207ENST00000540351 WDR62O43379 1518 aa25.67■■□□□ 1.7
UBC-207ENST00000540351 MRC2Q9UBG0 1479 aa25.66■■□□□ 1.7
UBC-207ENST00000540351 WIZO95785 1651 aa25.45■■□□□ 1.66
UBC-207ENST00000540351 CEP164Q9UPV0 1460 aa25.41■■□□□ 1.66
UBC-207ENST00000540351 FANCD2Q9BXW9 1451 aa25.38■■□□□ 1.65
UBC-207ENST00000540351 CFTRP13569 1480 aa25.34■■□□□ 1.65
UBC-207ENST00000540351 OSCARQ8IYS5 282 aa25.32■■□□□ 1.64
UBC-207ENST00000540351 URB2Q14146 1524 aaKnown RBP25.27■■□□□ 1.64
UBC-207ENST00000540351 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
UBC-207ENST00000540351 RIMBP3CA6NJZ7 1639 aa25.12■■□□□ 1.61
UBC-207ENST00000540351 RIMBP3BA6NNM3 1639 aa25.12■■□□□ 1.61
UBC-207ENST00000540351 RIMBP3Q9UFD9 1639 aa25.12■■□□□ 1.61
UBC-207ENST00000540351 TOP2AP11388 1531 aaKnown RBP25.09■■□□□ 1.61
UBC-207ENST00000540351 ZNF608Q9ULD9 1512 aaPredicted RBP25.04■■□□□ 1.6
UBC-207ENST00000540351 ARHGEF11O15085 1522 aa25■■□□□ 1.59
UBC-207ENST00000540351 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
UBC-207ENST00000540351 IFT140Q96RY7 1462 aa24.96■■□□□ 1.59
UBC-207ENST00000540351 TOPBP1Q92547 1522 aa24.87■■□□□ 1.57
UBC-207ENST00000540351 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
UBC-207ENST00000540351 EIF4G3O43432 1585 aaKnown RBP24.81■■□□□ 1.56
UBC-207ENST00000540351 ARAP1Q96P48 1450 aa24.76■■□□□ 1.55
UBC-207ENST00000540351 TARBP1Q13395 1621 aaKnown RBP24.75■■□□□ 1.55
UBC-207ENST00000540351 CYB5RLQ6IPT4 315 aa24.74■■□□□ 1.55
UBC-207ENST00000540351 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
UBC-207ENST00000540351 DNMBPQ6XZF7 1577 aa24.71■■□□□ 1.55
UBC-207ENST00000540351 CHD1O14646 1710 aa24.7■■□□□ 1.54
UBC-207ENST00000540351 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.548e-18■■■■■ 28.7
UBC-207ENST00000540351 POLA1P09884 1462 aaPredicted RBP24.6■■□□□ 1.53
UBC-207ENST00000540351 CLASP1Q7Z460 1538 aa24.51■■□□□ 1.51
UBC-207ENST00000540351 TRHP20396 242 aaPredicted RBP24.5■■□□□ 1.51
UBC-207ENST00000540351 RAD54L2Q9Y4B4 1467 aa24.5■■□□□ 1.51
UBC-207ENST00000540351 TDRD9Q8NDG6 1382 aaKnown RBP24.44■■□□□ 1.5
UBC-207ENST00000540351 FBLN2P98095 1184 aa24.44■■□□□ 1.5
UBC-207ENST00000540351 SNAPC4Q5SXM2 1469 aa24.41■■□□□ 1.5
UBC-207ENST00000540351 SOGA1O94964 1423 aa24.41■■□□□ 1.5
UBC-207ENST00000540351 WDR97A6NE52 1622 aa24.39■■□□□ 1.49
UBC-207ENST00000540351 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
UBC-207ENST00000540351 MAGI1Q96QZ7 1491 aaPredicted RBP24.33■■□□□ 1.49
UBC-207ENST00000540351 SYNJ1O43426 1573 aa24.3■■□□□ 1.48
UBC-207ENST00000540351 CUX1P39880 1505 aa24.3■■□□□ 1.48
UBC-207ENST00000540351 SYNJ2O15056 1496 aa24.26■■□□□ 1.47
UBC-207ENST00000540351 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
UBC-207ENST00000540351 CHMP7Q8WUX9 453 aaPredicted RBP24.24■■□□□ 1.47
UBC-207ENST00000540351 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
UBC-207ENST00000540351 PBRM1Q86U86 1689 aa24.11■■□□□ 1.45
UBC-207ENST00000540351 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
UBC-207ENST00000540351 ERCC6L2Q5T890 1561 aa24.09■■□□□ 1.45
UBC-207ENST00000540351 ABCA5Q8WWZ7 1642 aa24.09■■□□□ 1.45
UBC-207ENST00000540351 ABCA10Q8WWZ4 1543 aa24.07■■□□□ 1.44
UBC-207ENST00000540351 NUP160Q12769 1436 aa23.99■■□□□ 1.43
UBC-207ENST00000540351 GRIN2AQ12879 1464 aa23.98■■□□□ 1.43
UBC-207ENST00000540351 CEP170Q5SW79 1584 aa23.95■■□□□ 1.43
UBC-207ENST00000540351 SHROOM2Q13796 1616 aa23.94■■□□□ 1.42
UBC-207ENST00000540351 ADAMTS12P58397 1594 aa23.91■■□□□ 1.42
UBC-207ENST00000540351 KIF13AQ9H1H9 1805 aa23.86■■□□□ 1.41
UBC-207ENST00000540351 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
UBC-207ENST00000540351 WRNQ14191 1432 aaPredicted RBP eCLIP23.79■■□□□ 1.4
UBC-207ENST00000540351 BIVM-ERCC5R4GMW8 1640 aa23.74■■□□□ 1.39
UBC-207ENST00000540351 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
UBC-207ENST00000540351 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
UBC-207ENST00000540351 PRG4Q92954 1404 aaPredicted RBP23.69■■□□□ 1.38
UBC-207ENST00000540351 ABCC10Q5T3U5 1492 aa23.67■■□□□ 1.38
UBC-207ENST00000540351 JPH4Q96JJ6 628 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms