RNA–Protein interactions for RNA: ENST00000556321.1

PSMA3-210, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 500 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-210ENST00000556321 AEBP2Q6ZN18 517 aaPredicted RBP20.14■□□□□ 0.81
PSMA3-210ENST00000556321 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
PSMA3-210ENST00000556321 SENP3Q9H4L4 574 aaPredicted RBP17.44■□□□□ 0.38
PSMA3-210ENST00000556321 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.32
PSMA3-210ENST00000556321 POTEDQ86YR6 584 aa16.59■□□□□ 0.25
PSMA3-210ENST00000556321 FOXD1Q16676 465 aa16.26■□□□□ 0.19
PSMA3-210ENST00000556321 MSH5O43196 834 aa15.64■□□□□ 0.09
PSMA3-210ENST00000556321 PLPPR3Q6T4P5 718 aa15.5■□□□□ 0.07
PSMA3-210ENST00000556321 PIAS4Q8N2W9 510 aaPredicted RBP15.05■□□□□ -0
PSMA3-210ENST00000556321 PPP6R1Q9UPN7 881 aa14.6□□□□□ -0.07
PSMA3-210ENST00000556321 ADRA2BP18089 450 aa14.48□□□□□ -0.09
PSMA3-210ENST00000556321 KCNA4P22459 653 aa14.2□□□□□ -0.14
PSMA3-210ENST00000556321 EHMT2Q96KQ7 1210 aa13.98□□□□□ -0.17
PSMA3-210ENST00000556321 CACNB1Q02641 598 aaPredicted RBP13.88□□□□□ -0.19
PSMA3-210ENST00000556321 PPP4R3CPQ6ZMV5 832 aa13.74□□□□□ -0.21
PSMA3-210ENST00000556321 DMRT2Q9Y5R5 561 aa13.67□□□□□ -0.22
PSMA3-210ENST00000556321 SLC4A1APQ9BWU0 796 aaKnown RBP13.63□□□□□ -0.23
PSMA3-210ENST00000556321 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
PSMA3-210ENST00000556321 NCBP3Q53F19 620 aaKnown RBP13.57□□□□□ -0.24
PSMA3-210ENST00000556321 MAPK8IP2Q13387 824 aaPredicted RBP13.48□□□□□ -0.25
PSMA3-210ENST00000556321 NPM3O75607 178 aaKnown RBP13.39□□□□□ -0.27
PSMA3-210ENST00000556321 SCAF1Q9H7N4 1312 aaKnown RBP13.35□□□□□ -0.27
PSMA3-210ENST00000556321 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
PSMA3-210ENST00000556321 CNKSR2Q8WXI2 1034 aa13.21□□□□□ -0.29
PSMA3-210ENST00000556321 DCAF8L1A6NGE4 600 aa13.14□□□□□ -0.31
PSMA3-210ENST00000556321 ZBTB22O15209 634 aa13.11□□□□□ -0.31
PSMA3-210ENST00000556321 DNAJC5BQ9UF47 199 aa13.03□□□□□ -0.32
PSMA3-210ENST00000556321 C1QBPQ07021 282 aaKnown RBP13.02□□□□□ -0.33
PSMA3-210ENST00000556321 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
PSMA3-210ENST00000556321 POTEHQ6S545 545 aa12.86□□□□□ -0.35
PSMA3-210ENST00000556321 HOXD11P31277 338 aaPredicted RBP12.83□□□□□ -0.36
PSMA3-210ENST00000556321 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
PSMA3-210ENST00000556321 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
PSMA3-210ENST00000556321 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
PSMA3-210ENST00000556321 MYCNP04198 464 aaPredicted RBP12.37□□□□□ -0.43
PSMA3-210ENST00000556321 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
PSMA3-210ENST00000556321 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
PSMA3-210ENST00000556321 SLC24A1O60721 1099 aa12.27□□□□□ -0.45
PSMA3-210ENST00000556321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.24□□□□□ -0.45
PSMA3-210ENST00000556321 FKBP8Q14318 412 aa12.19□□□□□ -0.46
PSMA3-210ENST00000556321 DSG3P32926 999 aa12.08□□□□□ -0.48
PSMA3-210ENST00000556321 CAPN15O75808 1086 aa11.97□□□□□ -0.49
PSMA3-210ENST00000556321 ATF5Q9Y2D1 282 aaPredicted RBP11.97□□□□□ -0.49
PSMA3-210ENST00000556321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.92□□□□□ -0.5
PSMA3-210ENST00000556321 HNRNPUL2Q1KMD3 747 aaKnown RBP11.92□□□□□ -0.5
PSMA3-210ENST00000556321 SAMD1Q6SPF0 538 aaPredicted RBP11.91□□□□□ -0.5
PSMA3-210ENST00000556321 SPINK5Q9NQ38 1064 aaPredicted RBP11.9□□□□□ -0.5
PSMA3-210ENST00000556321 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
PSMA3-210ENST00000556321 SP7Q8TDD2 431 aaPredicted RBP11.69□□□□□ -0.54
PSMA3-210ENST00000556321 ZNF219Q9P2Y4 722 aaPredicted RBP11.69□□□□□ -0.54
PSMA3-210ENST00000556321 CHRDL2Q6WN34 429 aa11.66□□□□□ -0.54
PSMA3-210ENST00000556321 RBM42Q9BTD8 480 aaKnown RBP11.65□□□□□ -0.54
PSMA3-210ENST00000556321 APLP2Q06481 763 aa11.63□□□□□ -0.55
PSMA3-210ENST00000556321 FBXO3Q9UK99 471 aa11.6□□□□□ -0.55
PSMA3-210ENST00000556321 ABCB7O75027 752 aa11.58□□□□□ -0.56
PSMA3-210ENST00000556321 TRHP20396 242 aaPredicted RBP11.57□□□□□ -0.56
PSMA3-210ENST00000556321 PROM2Q8N271 834 aa11.55□□□□□ -0.56
PSMA3-210ENST00000556321 SPDYE4A6NLX3 237 aa11.54□□□□□ -0.56
PSMA3-210ENST00000556321 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
PSMA3-210ENST00000556321 VASPP50552 380 aaPredicted RBP11.43□□□□□ -0.58
PSMA3-210ENST00000556321 FBLN2P98095 1184 aa11.4□□□□□ -0.58
PSMA3-210ENST00000556321 PLCB2Q00722 1185 aa11.39□□□□□ -0.59
PSMA3-210ENST00000556321 IFNLR1Q8IU57 520 aaPredicted RBP11.33□□□□□ -0.6
PSMA3-210ENST00000556321 POLA2Q14181 598 aa11.27□□□□□ -0.61
PSMA3-210ENST00000556321 PKD2Q13563 968 aa11.23□□□□□ -0.61
PSMA3-210ENST00000556321 HAX1O00165 279 aa11.21□□□□□ -0.61
PSMA3-210ENST00000556321 ZBTB12Q9Y330 459 aaPredicted RBP11.18□□□□□ -0.62
PSMA3-210ENST00000556321 PIP4P2Q8N4L2 257 aa11.17□□□□□ -0.62
PSMA3-210ENST00000556321 HAP1P54257 671 aaPredicted RBP11.16□□□□□ -0.62
PSMA3-210ENST00000556321 AKT1S1Q96B36 256 aa11.15□□□□□ -0.62
PSMA3-210ENST00000556321 DCAF8L2P0C7V8 631 aa11.13□□□□□ -0.63
PSMA3-210ENST00000556321 VSIG10Q8N0Z9 540 aa11.08□□□□□ -0.64
PSMA3-210ENST00000556321 SPOCK2Q92563 424 aa11.07□□□□□ -0.64
PSMA3-210ENST00000556321 BCANQ96GW7 911 aa11.05□□□□□ -0.64
PSMA3-210ENST00000556321 REM2Q8IYK8 340 aaPredicted RBP11.02□□□□□ -0.65
PSMA3-210ENST00000556321 BBXQ8WY36 941 aaPredicted RBP11.02□□□□□ -0.65
PSMA3-210ENST00000556321 STAG3Q9UJ98 1225 aa11.02□□□□□ -0.65
PSMA3-210ENST00000556321 ECM2O94769 699 aaPredicted RBP10.99□□□□□ -0.65
PSMA3-210ENST00000556321 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
PSMA3-210ENST00000556321 FXR2P51116 673 aaKnown RBP eCLIP10.98□□□□□ -0.65
PSMA3-210ENST00000556321 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.97□□□□□ -0.65
PSMA3-210ENST00000556321 SSUH2Q9Y2M2 353 aa10.96□□□□□ -0.65
PSMA3-210ENST00000556321 SPDYE2BA6NHP3 402 aa10.95□□□□□ -0.66
PSMA3-210ENST00000556321 NPM1P06748 294 aaKnown RBP eCLIP10.95□□□□□ -0.66
PSMA3-210ENST00000556321 SPDYE6P0CI01 402 aa10.95□□□□□ -0.66
PSMA3-210ENST00000556321 SPDYE2Q495Y8 402 aa10.95□□□□□ -0.66
PSMA3-210ENST00000556321 ZNF692Q9BU19 519 aaPredicted RBP10.95□□□□□ -0.66
PSMA3-210ENST00000556321 PLSCR2Q9NRY7 297 aa10.94□□□□□ -0.66
PSMA3-210ENST00000556321 LHX8Q68G74 356 aa10.93□□□□□ -0.66
PSMA3-210ENST00000556321 EVX2Q03828 476 aa10.92□□□□□ -0.66
PSMA3-210ENST00000556321 PITPNM1O00562 1244 aa10.91□□□□□ -0.66
PSMA3-210ENST00000556321 TAOK2Q9UL54 1235 aa10.9□□□□□ -0.66
PSMA3-210ENST00000556321 KDM2AQ9Y2K7 1162 aa10.9□□□□□ -0.66
PSMA3-210ENST00000556321 PLCD3Q8N3E9 789 aa10.89□□□□□ -0.67
PSMA3-210ENST00000556321 RGL2O15211 777 aa10.88□□□□□ -0.67
PSMA3-210ENST00000556321 PAXIP1Q6ZW49 1069 aaPredicted RBP10.88□□□□□ -0.67
PSMA3-210ENST00000556321 OSCARQ8IYS5 282 aa10.87□□□□□ -0.67
PSMA3-210ENST00000556321 PRKCSHP14314 528 aaPredicted RBP10.84□□□□□ -0.67
PSMA3-210ENST00000556321 PABPN1Q86U42 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
PSMA3-210ENST00000556321 MIER1Q8N108 512 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 867.7 ms