Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 AC124016.1-201ENST00000609552 612 ntBASIC19.9■□□□□ 0.78
LRRC38Q5VT99 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
LRRC38Q5VT99 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 AL512353.2-201ENST00000448759 1962 ntBASIC19.89■□□□□ 0.77
LRRC38Q5VT99 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 RN7SL471P-201ENST00000580476 299 ntBASIC19.89■□□□□ 0.77
LRRC38Q5VT99 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC38Q5VT99 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 Z85996.1-201ENST00000494644 937 ntBASIC19.88■□□□□ 0.77
LRRC38Q5VT99 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 AL445675.2-201ENST00000620291 557 ntBASIC19.88■□□□□ 0.77
LRRC38Q5VT99 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRC38Q5VT99 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 AC110285.5-201ENST00000611501 352 ntBASIC19.87■□□□□ 0.77
LRRC38Q5VT99 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC38Q5VT99 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRC38Q5VT99 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms