Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 AL512353.2-201ENST00000448759 1962 ntBASIC16.17■□□□□ 0.18
HLA-AP01891 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-AP01891 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 KRT18P5-201ENST00000436075 1291 ntBASIC16.17■□□□□ 0.18
HLA-AP01891 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HLA-AP01891 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-AP01891 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-AP01891 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-AP01891 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-AP01891 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-AP01891 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-AP01891 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-AP01891 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-AP01891 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
HLA-AP01891 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.16■□□□□ 0.18
HLA-AP01891 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-AP01891 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-AP01891 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-AP01891 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HLA-AP01891 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
HLA-AP01891 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-AP01891 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-AP01891 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-AP01891 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.16■□□□□ 0.18
HLA-AP01891 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-AP01891 AL162430.1-201ENST00000480705 870 ntBASIC16.16■□□□□ 0.18
HLA-AP01891 KRT18P20-201ENST00000548986 1279 ntBASIC16.16■□□□□ 0.18
HLA-AP01891 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.16■□□□□ 0.18
HLA-AP01891 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.16■□□□□ 0.18
HLA-AP01891 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-AP01891 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
HLA-AP01891 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HLA-AP01891 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HLA-AP01891 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-AP01891 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.16■□□□□ 0.18
HLA-AP01891 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-AP01891 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-AP01891 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-AP01891 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-AP01891 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 KRT19P1-201ENST00000405746 1186 ntBASIC16.15■□□□□ 0.18
HLA-AP01891 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-AP01891 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HLA-AP01891 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HLA-AP01891 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.15■□□□□ 0.18
HLA-AP01891 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-AP01891 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-AP01891 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HLA-AP01891 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-AP01891 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
HLA-AP01891 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms