Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA3A0PJX4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.71■□□□□ 0.26
SHISA3A0PJX4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 KRT17P1-201ENST00000399211 1546 ntBASIC16.7■□□□□ 0.26
SHISA3A0PJX4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.7■□□□□ 0.26
SHISA3A0PJX4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SHISA3A0PJX4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA3A0PJX4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms