Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 RNF111-202ENST00000557998 4803 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 CLASP1-201ENST00000263710 8092 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 HNRNPDL-201ENST00000295470 3781 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 MICAL2-231ENST00000537344 3774 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AC046168.1-201ENST00000561283 3814 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 TWISTNB-201ENST00000222567 3942 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 HIF1A-202ENST00000337138 3919 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 HIF1A-203ENST00000394997 3922 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 KLHL1-202ENST00000545028 3966 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ANO7-201ENST00000274979 4128 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AL591543.1-202ENST00000642095 4149 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 CAMTA2-203ENST00000381311 4374 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AC090197.1-202ENST00000519692 4374 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 NUP85-210ENST00000579298 1890 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 CBLL1-205ENST00000440859 4432 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 TRIM39-203ENST00000396547 3187 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AC012508.1-201ENST00000564121 4476 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 POLR3G-201ENST00000399107 3285 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 CAMK2G-204ENST00000351293 3563 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 DDX11-229ENST00000545668 3751 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 CARMIL1-201ENST00000329474 5431 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 GABRA1-204ENST00000437025 4087 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 AL158071.4-201ENST00000608358 4125 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 UTY-201ENST00000329134 4325 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 NOP2-207ENST00000537442 2613 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 TTLL7-201ENST00000260505 7976 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 PMS2-206ENST00000441476 2730 ntTSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 STXBP5L-208ENST00000497029 3036 ntTSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 SCN5A-210ENST00000455624 7170 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RPS6KB1-201ENST00000225577 5375 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 TRPV3-201ENST00000301365 3235 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 CSMD2-203ENST00000373377 3212 ntTSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 DHX35-203ENST00000373325 3287 ntTSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 EXD2-203ENST00000409018 3252 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 CORO2A-202ENST00000375077 5459 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 C9orf85-206ENST00000486911 3321 ntTSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 DDX11-202ENST00000350437 3724 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 GRAMD1B-206ENST00000529432 6266 ntTSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 SNORD68-201ENST00000363214 84 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RNU6-173P-201ENST00000364215 104 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 Y_RNA.267-201ENST00000364679 109 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 SNORA73A-201ENST00000364938 206 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 SNORA30-201ENST00000384028 129 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RNU6-571P-201ENST00000384128 107 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RNU6-1235P-201ENST00000384559 107 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RNU6-140P-201ENST00000384566 108 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 SNORA80E-201ENST00000384744 137 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 SUN1-202ENST00000389574 3812 ntAPPRIS P3 TSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RNU11-5P-201ENST00000391216 129 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RN7SKP30-201ENST00000411373 334 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 AC244452.1-201ENST00000413798 141 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RPL27AP8-201ENST00000424277 446 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 BX293535.1-201ENST00000443579 283 ntTSL 3 BASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 AL390728.3-201ENST00000452704 270 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RNU6-498P-201ENST00000459468 107 ntBASIC2.3□□□□□ -2.04
KRTAP4-11Q9BYQ6 RN7SL146P-201ENST00000472338 297 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms