RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 DCAF8L2P0C7V8 631 aa17.46■□□□□ 0.39
SCN5A-210ENST00000455624 SUPT5HO00267 1087 aaKnown RBP16.35■□□□□ 0.21
SCN5A-210ENST00000455624 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
SCN5A-210ENST00000455624 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
SCN5A-210ENST00000455624 SHROOM4Q9ULL8 1493 aa16.05■□□□□ 0.16
SCN5A-210ENST00000455624 APLP2Q06481 763 aa15.96■□□□□ 0.15
SCN5A-210ENST00000455624 FAM9AQ8IZU1 332 aaPredicted RBP15.91■□□□□ 0.14
SCN5A-210ENST00000455624 NISCHQ9Y2I1 1504 aa15.82■□□□□ 0.12
SCN5A-210ENST00000455624 TTBK1Q5TCY1 1321 aaPredicted RBP15.63■□□□□ 0.09
SCN5A-210ENST00000455624 ERICH6Q7L0X2 663 aa15.6■□□□□ 0.09
SCN5A-210ENST00000455624 RANGAP1P46060 587 aaPredicted RBP15.48■□□□□ 0.07
SCN5A-210ENST00000455624 CCER1Q8TC90 406 aaPredicted RBP15.46■□□□□ 0.07
SCN5A-210ENST00000455624 ATP1B4Q9UN42 357 aaPredicted RBP15.46■□□□□ 0.07
SCN5A-210ENST00000455624 PCGF6Q9BYE7 350 aa15.34■□□□□ 0.05
SCN5A-210ENST00000455624 CENPBP07199 599 aaPredicted RBP15.29■□□□□ 0.04
SCN5A-210ENST00000455624 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
SCN5A-210ENST00000455624 NEFLP07196 543 aa15.15■□□□□ 0.02
SCN5A-210ENST00000455624 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
SCN5A-210ENST00000455624 UBTFP17480 764 aaKnown RBP15.12■□□□□ 0.01
SCN5A-210ENST00000455624 MYT1LQ9UL68 1186 aa15.05■□□□□ -0
SCN5A-210ENST00000455624 YTHDC1Q96MU7 727 aaKnown RBP15.03■□□□□ -0
SCN5A-210ENST00000455624 DAXXQ9UER7 740 aaPredicted RBP14.91□□□□□ -0.02
SCN5A-210ENST00000455624 POLR3GLQ9BT43 218 aa14.88□□□□□ -0.03
SCN5A-210ENST00000455624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.87□□□□□ -0.03
SCN5A-210ENST00000455624 HNRNPUL2Q1KMD3 747 aaKnown RBP14.87□□□□□ -0.03
SCN5A-210ENST00000455624 PPARGC1BQ86YN6 1023 aaKnown RBP14.79□□□□□ -0.04
SCN5A-210ENST00000455624 CHIC1Q5VXU3 224 aa14.79□□□□□ -0.04
SCN5A-210ENST00000455624 MYT1Q01538 1121 aa14.77□□□□□ -0.05
SCN5A-210ENST00000455624 ITGAEP38570 1179 aa14.74□□□□□ -0.05
SCN5A-210ENST00000455624 SLC4A1APQ9BWU0 796 aaKnown RBP14.74□□□□□ -0.05
SCN5A-210ENST00000455624 CNGB1Q14028 1251 aaPredicted RBP14.66□□□□□ -0.06
SCN5A-210ENST00000455624 ZNF316A6NFI3 1004 aaPredicted RBP14.56□□□□□ -0.08
SCN5A-210ENST00000455624 TRIM26Q12899 539 aaPredicted RBP14.56□□□□□ -0.08
SCN5A-210ENST00000455624 CLSPNQ9HAW4 1339 aa14.51□□□□□ -0.09
SCN5A-210ENST00000455624 RTL5Q5HYW3 569 aaPredicted RBP14.4□□□□□ -0.1
SCN5A-210ENST00000455624 FAM50AQ14320 339 aaKnown RBP14.37□□□□□ -0.11
SCN5A-210ENST00000455624 TRIM52Q96A61 297 aa14.37□□□□□ -0.11
SCN5A-210ENST00000455624 HRCP23327 699 aa14.35□□□□□ -0.11
SCN5A-210ENST00000455624 ZBTB47Q9UFB7 747 aaPredicted RBP14.32□□□□□ -0.12
SCN5A-210ENST00000455624 SLC24A1O60721 1099 aa14.29□□□□□ -0.12
SCN5A-210ENST00000455624 LOC105371045A0A1W2PR82 267 aa14.24□□□□□ -0.13
SCN5A-210ENST00000455624 BCANQ96GW7 911 aa14.24□□□□□ -0.13
SCN5A-210ENST00000455624 NEUROD1Q13562 356 aa14.23□□□□□ -0.13
SCN5A-210ENST00000455624 ZNF326Q5BKZ1 582 aaKnown RBP14.21□□□□□ -0.14
SCN5A-210ENST00000455624 CANXP27824 592 aaKnown RBP14.19□□□□□ -0.14
SCN5A-210ENST00000455624 BCL11AQ9H165 835 aa14.16□□□□□ -0.14
SCN5A-210ENST00000455624 FBLN2P98095 1184 aa14.15□□□□□ -0.14
SCN5A-210ENST00000455624 DIEXFQ68CQ4 756 aaKnown RBP14.14□□□□□ -0.15
SCN5A-210ENST00000455624 NEFMP07197 916 aa14.13□□□□□ -0.15
SCN5A-210ENST00000455624 ANP32CO43423 234 aa14.1□□□□□ -0.15
SCN5A-210ENST00000455624 PABPN1Q86U42 306 aaKnown RBP eCLIP14.08□□□□□ -0.16
SCN5A-210ENST00000455624 CDK11AQ9UQ88 783 aaPredicted RBP14.06□□□□□ -0.16
SCN5A-210ENST00000455624 ABCC9O60706 1549 aa14□□□□□ -0.17
SCN5A-210ENST00000455624 ESF1Q9H501 851 aaKnown RBP13.97□□□□□ -0.17
SCN5A-210ENST00000455624 ARID3CA6NKF2 412 aa13.95□□□□□ -0.18
SCN5A-210ENST00000455624 PLPPR3Q6T4P5 718 aa13.93□□□□□ -0.18
SCN5A-210ENST00000455624 ZNF777Q9ULD5 760 aaPredicted RBP13.92□□□□□ -0.18
SCN5A-210ENST00000455624 STAG3Q9UJ98 1225 aa13.9□□□□□ -0.18
SCN5A-210ENST00000455624 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
SCN5A-210ENST00000455624 ANP32AP39687 249 aaKnown RBP13.86□□□□□ -0.19
SCN5A-210ENST00000455624 NPM2Q86SE8 214 aaKnown RBP13.84□□□□□ -0.19
SCN5A-210ENST00000455624 CHGAP10645 457 aaKnown RBP13.84□□□□□ -0.19
SCN5A-210ENST00000455624 ANP32BQ92688 251 aaKnown RBP13.81□□□□□ -0.2
SCN5A-210ENST00000455624 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
SCN5A-210ENST00000455624 HSP90AA1P07900 732 aaKnown RBP13.78□□□□□ -0.2
SCN5A-210ENST00000455624 NPM1P06748 294 aaKnown RBP eCLIP13.73□□□□□ -0.21
SCN5A-210ENST00000455624 SCAF1Q9H7N4 1312 aaKnown RBP13.73□□□□□ -0.21
SCN5A-210ENST00000455624 UPF2Q9HAU5 1272 aaKnown RBP13.71□□□□□ -0.21
SCN5A-210ENST00000455624 A0A0G2JS52 829 aa13.66□□□□□ -0.22
SCN5A-210ENST00000455624 TONSLQ96HA7 1378 aa13.65□□□□□ -0.22
SCN5A-210ENST00000455624 ZBTB7CA1YPR0 619 aa13.63□□□□□ -0.23
SCN5A-210ENST00000455624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.63□□□□□ -0.23
SCN5A-210ENST00000455624 CDK11BP21127 795 aaKnown RBP13.63□□□□□ -0.23
SCN5A-210ENST00000455624 WDR43Q15061 677 aaKnown RBP eCLIP13.59□□□□□ -0.23
SCN5A-210ENST00000455624 FAM9BQ8IZU0 186 aa13.59□□□□□ -0.23
SCN5A-210ENST00000455624 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.59□□□□□ -0.23
SCN5A-210ENST00000455624 SALL2Q9Y467 1007 aaPredicted RBP13.58□□□□□ -0.24
SCN5A-210ENST00000455624 FKBP8Q14318 412 aa13.57□□□□□ -0.24
SCN5A-210ENST00000455624 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
SCN5A-210ENST00000455624 MYH16Q9H6N6 1097 aa13.56□□□□□ -0.24
SCN5A-210ENST00000455624 EIF5BO60841 1220 aaKnown RBP13.55□□□□□ -0.24
SCN5A-210ENST00000455624 SCRIBQ14160 1630 aa13.54□□□□□ -0.24
SCN5A-210ENST00000455624 HNRNPUQ00839 825 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCN5A-210ENST00000455624 C14orf37Q86TY3 774 aa13.53□□□□□ -0.24
SCN5A-210ENST00000455624 ACIN1Q9UKV3 1341 aaKnown RBP13.52□□□□□ -0.24
SCN5A-210ENST00000455624 PLEKHG5O94827 1062 aa13.52□□□□□ -0.25
SCN5A-210ENST00000455624 CHIC2Q9UKJ5 165 aa13.51□□□□□ -0.25
SCN5A-210ENST00000455624 TMC1Q8TDI8 760 aa13.5□□□□□ -0.25
SCN5A-210ENST00000455624 ARXQ96QS3 562 aa13.49□□□□□ -0.25
SCN5A-210ENST00000455624 KDM2AQ9Y2K7 1162 aa13.49□□□□□ -0.25
SCN5A-210ENST00000455624 PPP1R15AO75807 674 aaPredicted RBP13.47□□□□□ -0.25
SCN5A-210ENST00000455624 SENP3Q9H4L4 574 aaPredicted RBP13.46□□□□□ -0.25
SCN5A-210ENST00000455624 CCDC136Q96JN2 1154 aa13.46□□□□□ -0.26
SCN5A-210ENST00000455624 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
SCN5A-210ENST00000455624 DDX10Q13206 875 aaKnown RBP13.45□□□□□ -0.26
SCN5A-210ENST00000455624 GLIPR1L2Q4G1C9 344 aa13.45□□□□□ -0.26
SCN5A-210ENST00000455624 NBR1Q14596 966 aa13.42□□□□□ -0.26
SCN5A-210ENST00000455624 TSPY4P0CV99 314 aa13.42□□□□□ -0.26
SCN5A-210ENST00000455624 TSPY10P0CW01 314 aa13.42□□□□□ -0.26
SCN5A-210ENST00000455624 NCLP19338 710 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 265.6 ms