Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 AC079416.2-201ENST00000625035 1193 ntBASIC11.96□□□□□ -0.49
KRTAP4-11Q9BYQ6 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP4-11Q9BYQ6 AC092473.1-201ENST00000441098 221 ntBASIC11.59□□□□□ -0.55
KRTAP4-11Q9BYQ6 AP001002.2-201ENST00000625137 386 ntBASIC11.59□□□□□ -0.55
KRTAP4-11Q9BYQ6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC11.58□□□□□ -0.56
KRTAP4-11Q9BYQ6 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
KRTAP4-11Q9BYQ6 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC11.43□□□□□ -0.58
KRTAP4-11Q9BYQ6 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC11.4□□□□□ -0.58
KRTAP4-11Q9BYQ6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC11.27□□□□□ -0.61
KRTAP4-11Q9BYQ6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP4-11Q9BYQ6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-11Q9BYQ6 BNIP3P41-202ENST00000616656 861 ntBASIC11.2□□□□□ -0.62
KRTAP4-11Q9BYQ6 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC11.14□□□□□ -0.63
KRTAP4-11Q9BYQ6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP4-11Q9BYQ6 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC11.11□□□□□ -0.63
KRTAP4-11Q9BYQ6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC11□□□□□ -0.65
KRTAP4-11Q9BYQ6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP4-11Q9BYQ6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
KRTAP4-11Q9BYQ6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP4-11Q9BYQ6 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC10.88□□□□□ -0.67
KRTAP4-11Q9BYQ6 Z99916.3-201ENST00000623422 1080 ntBASIC10.87□□□□□ -0.67
KRTAP4-11Q9BYQ6 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC10.85□□□□□ -0.67
KRTAP4-11Q9BYQ6 TMEM14EP-202ENST00000639378 1296 ntBASIC10.84□□□□□ -0.67
KRTAP4-11Q9BYQ6 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC10.83□□□□□ -0.68
KRTAP4-11Q9BYQ6 AL390728.6-201ENST00000566446 1246 ntBASIC10.81□□□□□ -0.68
KRTAP4-11Q9BYQ6 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC10.79□□□□□ -0.68
KRTAP4-11Q9BYQ6 AC108359.1-201ENST00000616451 1211 ntBASIC10.79□□□□□ -0.68
KRTAP4-11Q9BYQ6 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC10.73□□□□□ -0.69
KRTAP4-11Q9BYQ6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC10.7□□□□□ -0.7
KRTAP4-11Q9BYQ6 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
KRTAP4-11Q9BYQ6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP4-11Q9BYQ6 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
KRTAP4-11Q9BYQ6 AC006213.4-201ENST00000616184 634 ntBASIC10.66□□□□□ -0.7
KRTAP4-11Q9BYQ6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-11Q9BYQ6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-11Q9BYQ6 AL365223.1-201ENST00000574864 1297 ntBASIC10.64□□□□□ -0.71
KRTAP4-11Q9BYQ6 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
KRTAP4-11Q9BYQ6 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC10.63□□□□□ -0.71
KRTAP4-11Q9BYQ6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
KRTAP4-11Q9BYQ6 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC10.6□□□□□ -0.71
KRTAP4-11Q9BYQ6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC10.6□□□□□ -0.71
KRTAP4-11Q9BYQ6 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC10.6□□□□□ -0.71
KRTAP4-11Q9BYQ6 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-11Q9BYQ6 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC10.58□□□□□ -0.72
KRTAP4-11Q9BYQ6 AC009948.4-201ENST00000604692 675 ntBASIC10.56□□□□□ -0.72
KRTAP4-11Q9BYQ6 AKR1B10P2-201ENST00000577332 927 ntBASIC10.55□□□□□ -0.72
KRTAP4-11Q9BYQ6 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC10.54□□□□□ -0.72
KRTAP4-11Q9BYQ6 NIFKP4-201ENST00000567275 1192 ntBASIC10.54□□□□□ -0.72
KRTAP4-11Q9BYQ6 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC10.53□□□□□ -0.72
KRTAP4-11Q9BYQ6 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC10.52□□□□□ -0.73
KRTAP4-11Q9BYQ6 RN7SL718P-201ENST00000581254 303 ntBASIC10.52□□□□□ -0.73
KRTAP4-11Q9BYQ6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC10.5□□□□□ -0.73
KRTAP4-11Q9BYQ6 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP4-11Q9BYQ6 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP4-11Q9BYQ6 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC10.46□□□□□ -0.73
KRTAP4-11Q9BYQ6 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC10.46□□□□□ -0.73
KRTAP4-11Q9BYQ6 AL078595.1-201ENST00000404458 226 ntBASIC10.45□□□□□ -0.74
KRTAP4-11Q9BYQ6 KATNBL1P2-201ENST00000433311 835 ntBASIC10.45□□□□□ -0.74
KRTAP4-11Q9BYQ6 MTND4LP12-201ENST00000448237 295 ntBASIC10.43□□□□□ -0.74
KRTAP4-11Q9BYQ6 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC10.43□□□□□ -0.74
KRTAP4-11Q9BYQ6 AC098799.1-201ENST00000504752 800 ntBASIC10.41□□□□□ -0.74
KRTAP4-11Q9BYQ6 AC016180.1-201ENST00000567945 403 ntBASIC10.41□□□□□ -0.74
KRTAP4-11Q9BYQ6 AC137695.1-201ENST00000604126 489 ntBASIC10.41□□□□□ -0.74
KRTAP4-11Q9BYQ6 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC10.35□□□□□ -0.75
KRTAP4-11Q9BYQ6 AC020910.4-201ENST00000612269 540 ntBASIC10.35□□□□□ -0.75
KRTAP4-11Q9BYQ6 AC009712.1-201ENST00000564938 316 ntBASIC10.34□□□□□ -0.75
KRTAP4-11Q9BYQ6 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC10.34□□□□□ -0.75
KRTAP4-11Q9BYQ6 AC022079.1-201ENST00000621546 602 ntBASIC10.33□□□□□ -0.76
KRTAP4-11Q9BYQ6 SEPT7P7-201ENST00000420492 1301 ntBASIC10.32□□□□□ -0.76
KRTAP4-11Q9BYQ6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
KRTAP4-11Q9BYQ6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-11Q9BYQ6 AL353729.2-201ENST00000605859 1249 ntBASIC10.31□□□□□ -0.76
KRTAP4-11Q9BYQ6 AC022726.2-201ENST00000634673 547 ntBASIC10.31□□□□□ -0.76
KRTAP4-11Q9BYQ6 RN7SL275P-201ENST00000582762 335 ntBASIC10.3□□□□□ -0.76
KRTAP4-11Q9BYQ6 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC10.29□□□□□ -0.76
KRTAP4-11Q9BYQ6 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP4-11Q9BYQ6 RN7SL602P-201ENST00000578326 324 ntBASIC10.27□□□□□ -0.77
KRTAP4-11Q9BYQ6 AC026790.2-201ENST00000606282 430 ntBASIC10.26□□□□□ -0.77
KRTAP4-11Q9BYQ6 AP003400.6-201ENST00000624698 740 ntBASIC10.25□□□□□ -0.77
KRTAP4-11Q9BYQ6 PAX6-247ENST00000638965 979 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP4-11Q9BYQ6 MTATP6P19-201ENST00000413797 659 ntBASIC10.24□□□□□ -0.77
KRTAP4-11Q9BYQ6 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC10.24□□□□□ -0.77
KRTAP4-11Q9BYQ6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC10.23□□□□□ -0.77
KRTAP4-11Q9BYQ6 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC10.23□□□□□ -0.77
KRTAP4-11Q9BYQ6 MTND2P7-201ENST00000521337 640 ntBASIC10.22□□□□□ -0.77
KRTAP4-11Q9BYQ6 AC012497.1-201ENST00000429392 575 ntBASIC10.21□□□□□ -0.77
KRTAP4-11Q9BYQ6 EIF2S2P5-201ENST00000457635 968 ntBASIC10.21□□□□□ -0.77
KRTAP4-11Q9BYQ6 AC004223.2-201ENST00000590309 544 ntBASIC10.21□□□□□ -0.77
KRTAP4-11Q9BYQ6 AP000240.1-201ENST00000609910 452 ntBASIC10.21□□□□□ -0.77
KRTAP4-11Q9BYQ6 EIF2S2P3-201ENST00000428356 999 ntBASIC10.2□□□□□ -0.78
KRTAP4-11Q9BYQ6 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC10.19□□□□□ -0.78
KRTAP4-11Q9BYQ6 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP4-11Q9BYQ6 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC10.18□□□□□ -0.78
KRTAP4-11Q9BYQ6 GAPDHP74-202ENST00000632456 782 ntBASIC10.18□□□□□ -0.78
KRTAP4-11Q9BYQ6 AC005972.3-201ENST00000606304 481 ntBASIC10.17□□□□□ -0.78
KRTAP4-11Q9BYQ6 AL451064.1-201ENST00000607718 471 ntBASIC10.17□□□□□ -0.78
KRTAP4-11Q9BYQ6 AL391262.2-201ENST00000622466 494 ntBASIC10.15□□□□□ -0.78
KRTAP4-11Q9BYQ6 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-11Q9BYQ6 LST1-206ENST00000376090 689 ntTSL 2 BASIC10.12□□□□□ -0.79
KRTAP4-11Q9BYQ6 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms