RNA–Protein interactions for RNA: ENST00000409018.7

EXD2-203, Transcript of exonuclease 3'-5' domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXD2, Length 3,252 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD2-203ENST00000409018 NISCHQ9Y2I1 1504 aa20.5■□□□□ 0.87
EXD2-203ENST00000409018 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
EXD2-203ENST00000409018 ZCCHC6Q5VYS8 1495 aaKnown RBP17.21■□□□□ 0.35
EXD2-203ENST00000409018 ABCC9O60706 1549 aa17.07■□□□□ 0.32
EXD2-203ENST00000409018 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
EXD2-203ENST00000409018 DCAF1Q9Y4B6 1507 aa16.91■□□□□ 0.3
EXD2-203ENST00000409018 SHROOM4Q9ULL8 1493 aa16.73■□□□□ 0.27
EXD2-203ENST00000409018 MYO15BQ96JP2 1530 aa16.73■□□□□ 0.27
EXD2-203ENST00000409018 NACADO15069 1562 aa16.68■□□□□ 0.26
EXD2-203ENST00000409018 RB1CC1Q8TDY2 1594 aa16.56■□□□□ 0.24
EXD2-203ENST00000409018 SCRIBQ14160 1630 aa16.5■□□□□ 0.23
EXD2-203ENST00000409018 HRCP23327 699 aa16.46■□□□□ 0.23
EXD2-203ENST00000409018 UNC13AQ9UPW8 1703 aa16.26■□□□□ 0.19
EXD2-203ENST00000409018 PPARGC1BQ86YN6 1023 aaKnown RBP16.25■□□□□ 0.19
EXD2-203ENST00000409018 PELP1Q8IZL8 1130 aaKnown RBP16.13■□□□□ 0.17
EXD2-203ENST00000409018 BICRAQ9NZM4 1560 aa16.12■□□□□ 0.17
EXD2-203ENST00000409018 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
EXD2-203ENST00000409018 PCGF6Q9BYE7 350 aa16.07■□□□□ 0.16
EXD2-203ENST00000409018 SUPT5HO00267 1087 aaKnown RBP16.02■□□□□ 0.16
EXD2-203ENST00000409018 CECR2Q9BXF3 1484 aa15.99■□□□□ 0.15
EXD2-203ENST00000409018 RSF1Q96T23 1441 aaPredicted RBP15.89■□□□□ 0.13
EXD2-203ENST00000409018 MROH2BQ7Z745 1585 aa15.87■□□□□ 0.13
EXD2-203ENST00000409018 BAZ1AQ9NRL2 1556 aaPredicted RBP15.81■□□□□ 0.12
EXD2-203ENST00000409018 SMARCA4P51532 1647 aa15.78■□□□□ 0.12
EXD2-203ENST00000409018 SCAF1Q9H7N4 1312 aaKnown RBP15.78■□□□□ 0.12
EXD2-203ENST00000409018 WIZO95785 1651 aa15.73■□□□□ 0.11
EXD2-203ENST00000409018 EIF4G1Q04637 1599 aaKnown RBP15.63■□□□□ 0.09
EXD2-203ENST00000409018 CHIC1Q5VXU3 224 aa15.62■□□□□ 0.09
EXD2-203ENST00000409018 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
EXD2-203ENST00000409018 ATAD2BQ9ULI0 1458 aa15.55■□□□□ 0.08
EXD2-203ENST00000409018 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
EXD2-203ENST00000409018 MYT1Q01538 1121 aa15.52■□□□□ 0.08
EXD2-203ENST00000409018 SMARCA2P51531 1590 aa15.5■□□□□ 0.07
EXD2-203ENST00000409018 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
EXD2-203ENST00000409018 CC2D2AQ9P2K1 1620 aa15.42■□□□□ 0.06
EXD2-203ENST00000409018 NCAPD3P42695 1498 aa15.42■□□□□ 0.06
EXD2-203ENST00000409018 CCDC88BA6NC98 1476 aa15.4■□□□□ 0.06
EXD2-203ENST00000409018 TRIM26Q12899 539 aaPredicted RBP15.39■□□□□ 0.05
EXD2-203ENST00000409018 LOC105371045A0A1W2PR82 267 aa15.39■□□□□ 0.05
EXD2-203ENST00000409018 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
EXD2-203ENST00000409018 ZEB1P37275 1124 aaPredicted RBP15.28■□□□□ 0.04
EXD2-203ENST00000409018 ACIN1Q9UKV3 1341 aaKnown RBP15.25■□□□□ 0.03
EXD2-203ENST00000409018 NEUROD1Q13562 356 aa15.25■□□□□ 0.03
EXD2-203ENST00000409018 GTF3C3Q9Y5Q9 886 aa15.19■□□□□ 0.02
EXD2-203ENST00000409018 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
EXD2-203ENST00000409018 ABCC8Q09428 1581 aa15.07■□□□□ 0
EXD2-203ENST00000409018 CFTRP13569 1480 aa15.06■□□□□ 0
EXD2-203ENST00000409018 TRIM41Q8WV44 630 aa15.04■□□□□ -0
EXD2-203ENST00000409018 CADPSQ9ULU8 1353 aa15.02■□□□□ -0
EXD2-203ENST00000409018 NESP48681 1621 aa14.98□□□□□ -0.01
EXD2-203ENST00000409018 CENPBP07199 599 aaPredicted RBP14.97□□□□□ -0.01
EXD2-203ENST00000409018 WRNQ14191 1432 aaPredicted RBP eCLIP14.94□□□□□ -0.02
EXD2-203ENST00000409018 PRDM2Q13029 1718 aa14.92□□□□□ -0.02
EXD2-203ENST00000409018 SYNJ1O43426 1573 aa14.91□□□□□ -0.02
EXD2-203ENST00000409018 LAMC3Q9Y6N6 1575 aa14.89□□□□□ -0.03
EXD2-203ENST00000409018 DIEXFQ68CQ4 756 aaKnown RBP14.87□□□□□ -0.03
EXD2-203ENST00000409018 FANCD2Q9BXW9 1451 aa14.87□□□□□ -0.03
EXD2-203ENST00000409018 CUX1P39880 1505 aa14.84□□□□□ -0.03
EXD2-203ENST00000409018 TOP2BQ02880 1626 aa14.82□□□□□ -0.04
EXD2-203ENST00000409018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
EXD2-203ENST00000409018 FAM9AQ8IZU1 332 aaPredicted RBP14.81□□□□□ -0.04
EXD2-203ENST00000409018 BIVM-ERCC5R4GMW8 1640 aa14.8□□□□□ -0.04
EXD2-203ENST00000409018 PDS5BQ9NTI5 1447 aa14.78□□□□□ -0.04
EXD2-203ENST00000409018 SOGA1O94964 1423 aa14.77□□□□□ -0.05
EXD2-203ENST00000409018 CEP164Q9UPV0 1460 aa14.77□□□□□ -0.05
EXD2-203ENST00000409018 KIF21AQ7Z4S6 1674 aa14.75□□□□□ -0.05
EXD2-203ENST00000409018 YTHDC1Q96MU7 727 aaKnown RBP14.75□□□□□ -0.05
EXD2-203ENST00000409018 CCER1Q8TC90 406 aaPredicted RBP14.75□□□□□ -0.05
EXD2-203ENST00000409018 EHMT2Q96KQ7 1210 aa14.74□□□□□ -0.05
EXD2-203ENST00000409018 RUSC2Q8N2Y8 1516 aa14.73□□□□□ -0.05
EXD2-203ENST00000409018 URB2Q14146 1524 aaKnown RBP14.71□□□□□ -0.06
EXD2-203ENST00000409018 DNMBPQ6XZF7 1577 aa14.7□□□□□ -0.06
EXD2-203ENST00000409018 TOPBP1Q92547 1522 aa14.7□□□□□ -0.06
EXD2-203ENST00000409018 BCL11AQ9H165 835 aa14.69□□□□□ -0.06
EXD2-203ENST00000409018 FGD5Q6ZNL6 1462 aa14.68□□□□□ -0.06
EXD2-203ENST00000409018 POLA1P09884 1462 aaPredicted RBP14.63□□□□□ -0.07
EXD2-203ENST00000409018 EEA1Q15075 1411 aa14.62□□□□□ -0.07
EXD2-203ENST00000409018 MRC2Q9UBG0 1479 aa14.62□□□□□ -0.07
EXD2-203ENST00000409018 ERCC6Q03468 1493 aa14.61□□□□□ -0.07
EXD2-203ENST00000409018 RAD54L2Q9Y4B4 1467 aa14.6□□□□□ -0.07
EXD2-203ENST00000409018 CSRNP3Q8WYN3 585 aa14.6□□□□□ -0.07
EXD2-203ENST00000409018 TTBK1Q5TCY1 1321 aaPredicted RBP14.59□□□□□ -0.07
EXD2-203ENST00000409018 CUX2O14529 1486 aa14.56□□□□□ -0.08
EXD2-203ENST00000409018 KIF27Q86VH2 1401 aa14.55□□□□□ -0.08
EXD2-203ENST00000409018 WDR62O43379 1518 aa14.55□□□□□ -0.08
EXD2-203ENST00000409018 THOC2Q8NI27 1593 aaKnown RBP14.54□□□□□ -0.08
EXD2-203ENST00000409018 ABCA10Q8WWZ4 1543 aa14.53□□□□□ -0.08
EXD2-203ENST00000409018 MIER1Q8N108 512 aa14.51□□□□□ -0.09
EXD2-203ENST00000409018 ANP32EQ9BTT0 268 aa14.5□□□□□ -0.09
EXD2-203ENST00000409018 WDR97A6NE52 1622 aa14.49□□□□□ -0.09
EXD2-203ENST00000409018 ZNF316A6NFI3 1004 aaPredicted RBP14.49□□□□□ -0.09
EXD2-203ENST00000409018 TARBP1Q13395 1621 aaKnown RBP14.49□□□□□ -0.09
EXD2-203ENST00000409018 KIF21BO75037 1637 aa14.47□□□□□ -0.09
EXD2-203ENST00000409018 IGF1RP08069 1367 aa14.47□□□□□ -0.09
EXD2-203ENST00000409018 TDRD9Q8NDG6 1382 aaKnown RBP14.46□□□□□ -0.09
EXD2-203ENST00000409018 RAPGEF2Q9Y4G8 1499 aa14.46□□□□□ -0.09
EXD2-203ENST00000409018 GOLGA3Q08378 1498 aa14.45□□□□□ -0.1
EXD2-203ENST00000409018 PRXQ9BXM0 1461 aa14.45□□□□□ -0.1
EXD2-203ENST00000409018 ABCA5Q8WWZ7 1642 aa14.42□□□□□ -0.1
EXD2-203ENST00000409018 IFT140Q96RY7 1462 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms