RNA–Protein interactions for RNA: ENST00000545028.2

KLHL1-202, Transcript of kelch like family member 1, humanhuman

TSL 2 BASIC

Gene KLHL1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1-202ENST00000545028 NISCHQ9Y2I1 1504 aa19.96■□□□□ 0.79
KLHL1-202ENST00000545028 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.41
KLHL1-202ENST00000545028 ABCC9O60706 1549 aa17.29■□□□□ 0.36
KLHL1-202ENST00000545028 CCDC180Q9P1Z9 1646 aa17.23■□□□□ 0.35
KLHL1-202ENST00000545028 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
KLHL1-202ENST00000545028 SHROOM4Q9ULL8 1493 aa16.71■□□□□ 0.26
KLHL1-202ENST00000545028 PABPN1Q86U42 306 aaKnown RBP eCLIP16.47■□□□□ 0.23
KLHL1-202ENST00000545028 RB1CC1Q8TDY2 1594 aa16.39■□□□□ 0.21
KLHL1-202ENST00000545028 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
KLHL1-202ENST00000545028 NACADO15069 1562 aa16.35■□□□□ 0.21
KLHL1-202ENST00000545028 SCRIBQ14160 1630 aa16.23■□□□□ 0.19
KLHL1-202ENST00000545028 SUPT5HO00267 1087 aaKnown RBP16.15■□□□□ 0.18
KLHL1-202ENST00000545028 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
KLHL1-202ENST00000545028 UNC13AQ9UPW8 1703 aa15.72■□□□□ 0.11
KLHL1-202ENST00000545028 BICRAQ9NZM4 1560 aa15.71■□□□□ 0.1
KLHL1-202ENST00000545028 CECR2Q9BXF3 1484 aa15.64■□□□□ 0.09
KLHL1-202ENST00000545028 RSF1Q96T23 1441 aaPredicted RBP15.62■□□□□ 0.09
KLHL1-202ENST00000545028 DNAJC5BQ9UF47 199 aa15.61■□□□□ 0.09
KLHL1-202ENST00000545028 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
KLHL1-202ENST00000545028 CHIC1Q5VXU3 224 aa15.49■□□□□ 0.07
KLHL1-202ENST00000545028 EIF4G1Q04637 1599 aaKnown RBP15.43■□□□□ 0.06
KLHL1-202ENST00000545028 WIZO95785 1651 aa15.42■□□□□ 0.06
KLHL1-202ENST00000545028 BAZ1AQ9NRL2 1556 aaPredicted RBP15.41■□□□□ 0.06
KLHL1-202ENST00000545028 CC2D2AQ9P2K1 1620 aa15.33■□□□□ 0.05
KLHL1-202ENST00000545028 SMARCA4P51532 1647 aa15.31■□□□□ 0.04
KLHL1-202ENST00000545028 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
KLHL1-202ENST00000545028 ATAD2BQ9ULI0 1458 aa15.29■□□□□ 0.04
KLHL1-202ENST00000545028 SMARCA2P51531 1590 aa15.22■□□□□ 0.03
KLHL1-202ENST00000545028 NCAPD3P42695 1498 aa15.15■□□□□ 0.02
KLHL1-202ENST00000545028 TOP2AP11388 1531 aaKnown RBP15.14■□□□□ 0.01
KLHL1-202ENST00000545028 CCDC88BA6NC98 1476 aa15.07■□□□□ 0
KLHL1-202ENST00000545028 TRIM41Q8WV44 630 aa15.06■□□□□ 0
KLHL1-202ENST00000545028 LOC105371045A0A1W2PR82 267 aa15.03■□□□□ -0
KLHL1-202ENST00000545028 PEG3Q9GZU2 1588 aa15.02■□□□□ -0
KLHL1-202ENST00000545028 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
KLHL1-202ENST00000545028 HMGXB3Q12766 1538 aa14.96□□□□□ -0.01
KLHL1-202ENST00000545028 ERCC6Q03468 1493 aa14.96□□□□□ -0.01
KLHL1-202ENST00000545028 FAM9AQ8IZU1 332 aaPredicted RBP14.94□□□□□ -0.02
KLHL1-202ENST00000545028 NESP48681 1621 aa14.94□□□□□ -0.02
KLHL1-202ENST00000545028 CADPSQ9ULU8 1353 aa14.93□□□□□ -0.02
KLHL1-202ENST00000545028 ABCC8Q09428 1581 aa14.91□□□□□ -0.02
KLHL1-202ENST00000545028 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.03
KLHL1-202ENST00000545028 FANCD2Q9BXW9 1451 aa14.75□□□□□ -0.05
KLHL1-202ENST00000545028 CFTRP13569 1480 aa14.72□□□□□ -0.05
KLHL1-202ENST00000545028 CEP164Q9UPV0 1460 aa14.7□□□□□ -0.06
KLHL1-202ENST00000545028 WRNQ14191 1432 aaPredicted RBP eCLIP14.68□□□□□ -0.06
KLHL1-202ENST00000545028 SOGA1O94964 1423 aa14.67□□□□□ -0.06
KLHL1-202ENST00000545028 FBLN2P98095 1184 aa14.67□□□□□ -0.06
KLHL1-202ENST00000545028 SYNJ1O43426 1573 aa14.66□□□□□ -0.06
KLHL1-202ENST00000545028 LAMC3Q9Y6N6 1575 aa14.65□□□□□ -0.06
KLHL1-202ENST00000545028 RUSC2Q8N2Y8 1516 aa14.64□□□□□ -0.07
KLHL1-202ENST00000545028 RANGAP1P46060 587 aaPredicted RBP14.6□□□□□ -0.07
KLHL1-202ENST00000545028 PCGF6Q9BYE7 350 aa14.54□□□□□ -0.08
KLHL1-202ENST00000545028 MRC2Q9UBG0 1479 aa14.53□□□□□ -0.08
KLHL1-202ENST00000545028 TDRD9Q8NDG6 1382 aaKnown RBP14.52□□□□□ -0.08
KLHL1-202ENST00000545028 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
KLHL1-202ENST00000545028 TOP2BQ02880 1626 aa14.49□□□□□ -0.09
KLHL1-202ENST00000545028 KIF21AQ7Z4S6 1674 aa14.48□□□□□ -0.09
KLHL1-202ENST00000545028 UBTFP17480 764 aaKnown RBP14.48□□□□□ -0.09
KLHL1-202ENST00000545028 RAD54L2Q9Y4B4 1467 aa14.47□□□□□ -0.09
KLHL1-202ENST00000545028 CUX1P39880 1505 aa14.47□□□□□ -0.09
KLHL1-202ENST00000545028 URB2Q14146 1524 aaKnown RBP14.46□□□□□ -0.09
KLHL1-202ENST00000545028 TTBK1Q5TCY1 1321 aaPredicted RBP14.46□□□□□ -0.1
KLHL1-202ENST00000545028 EEA1Q15075 1411 aa14.46□□□□□ -0.1
KLHL1-202ENST00000545028 TOPBP1Q92547 1522 aa14.45□□□□□ -0.1
KLHL1-202ENST00000545028 BIVM-ERCC5R4GMW8 1640 aa14.45□□□□□ -0.1
KLHL1-202ENST00000545028 CHMP7Q8WUX9 453 aaPredicted RBP14.44□□□□□ -0.1
KLHL1-202ENST00000545028 FGD5Q6ZNL6 1462 aa14.44□□□□□ -0.1
KLHL1-202ENST00000545028 PRDM2Q13029 1718 aa14.43□□□□□ -0.1
KLHL1-202ENST00000545028 CUX2O14529 1486 aa14.41□□□□□ -0.1
KLHL1-202ENST00000545028 AQRO60306 1485 aaKnown RBP eCLIP14.39□□□□□ -0.11
KLHL1-202ENST00000545028 PPARGC1BQ86YN6 1023 aaKnown RBP14.39□□□□□ -0.11
KLHL1-202ENST00000545028 POLA1P09884 1462 aaPredicted RBP14.38□□□□□ -0.11
KLHL1-202ENST00000545028 CEP162Q5TB80 1403 aa14.37□□□□□ -0.11
KLHL1-202ENST00000545028 GOLGA3Q08378 1498 aa14.36□□□□□ -0.11
KLHL1-202ENST00000545028 DNMBPQ6XZF7 1577 aa14.36□□□□□ -0.11
KLHL1-202ENST00000545028 TNIKQ9UKE5 1360 aa14.36□□□□□ -0.11
KLHL1-202ENST00000545028 TRIM26Q12899 539 aaPredicted RBP14.34□□□□□ -0.11
KLHL1-202ENST00000545028 KIF27Q86VH2 1401 aa14.34□□□□□ -0.11
KLHL1-202ENST00000545028 RAPGEF2Q9Y4G8 1499 aa14.33□□□□□ -0.12
KLHL1-202ENST00000545028 KIF21BO75037 1637 aa14.32□□□□□ -0.12
KLHL1-202ENST00000545028 ZNF608Q9ULD9 1512 aaPredicted RBP14.3□□□□□ -0.12
KLHL1-202ENST00000545028 IFT140Q96RY7 1462 aa14.3□□□□□ -0.12
KLHL1-202ENST00000545028 ATP1B4Q9UN42 357 aaPredicted RBP14.28□□□□□ -0.12
KLHL1-202ENST00000545028 WDR62O43379 1518 aa14.27□□□□□ -0.12
KLHL1-202ENST00000545028 GAPVD1Q14C86 1478 aa14.26□□□□□ -0.13
KLHL1-202ENST00000545028 THOC2Q8NI27 1593 aaKnown RBP14.25□□□□□ -0.13
KLHL1-202ENST00000545028 P3H3Q8IVL6 736 aa14.24□□□□□ -0.13
KLHL1-202ENST00000545028 CARMIL1Q5VZK9 1371 aa14.23□□□□□ -0.13
KLHL1-202ENST00000545028 PRXQ9BXM0 1461 aa14.22□□□□□ -0.13
KLHL1-202ENST00000545028 OSCARQ8IYS5 282 aa14.22□□□□□ -0.13
KLHL1-202ENST00000545028 HRCP23327 699 aa14.2□□□□□ -0.14
KLHL1-202ENST00000545028 CLIP1P30622 1438 aa14.19□□□□□ -0.14
KLHL1-202ENST00000545028 IGF1RP08069 1367 aa14.18□□□□□ -0.14
KLHL1-202ENST00000545028 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
KLHL1-202ENST00000545028 ERICH3Q5RHP9 1530 aa14.16□□□□□ -0.14
KLHL1-202ENST00000545028 ABCA10Q8WWZ4 1543 aa14.16□□□□□ -0.14
KLHL1-202ENST00000545028 SNAPC4Q5SXM2 1469 aa14.14□□□□□ -0.15
KLHL1-202ENST00000545028 ARID3CA6NKF2 412 aa14.12□□□□□ -0.15
KLHL1-202ENST00000545028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms