RNA–Protein interactions for RNA: ENST00000329474.6

CARMIL1-201, Transcript of capping protein regulator and myosin 1 linker 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARMIL1, Length 5,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1-201ENST00000329474 NISCHQ9Y2I1 1504 aa18.55■□□□□ 0.56
CARMIL1-201ENST00000329474 DCAF8L2P0C7V8 631 aa17.73■□□□□ 0.43
CARMIL1-201ENST00000329474 SHROOM4Q9ULL8 1493 aa17.38■□□□□ 0.37
CARMIL1-201ENST00000329474 SUPT5HO00267 1087 aaKnown RBP17.22■□□□□ 0.35
CARMIL1-201ENST00000329474 EHMT2Q96KQ7 1210 aa16.6■□□□□ 0.25
CARMIL1-201ENST00000329474 FAM9AQ8IZU1 332 aaPredicted RBP16.18■□□□□ 0.18
CARMIL1-201ENST00000329474 PCGF6Q9BYE7 350 aa16.05■□□□□ 0.16
CARMIL1-201ENST00000329474 TTBK1Q5TCY1 1321 aaPredicted RBP15.99■□□□□ 0.15
CARMIL1-201ENST00000329474 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
CARMIL1-201ENST00000329474 LOC105371045A0A1W2PR82 267 aa15.75■□□□□ 0.11
CARMIL1-201ENST00000329474 CHIC1Q5VXU3 224 aa15.73■□□□□ 0.11
CARMIL1-201ENST00000329474 PPARGC1BQ86YN6 1023 aaKnown RBP15.72■□□□□ 0.11
CARMIL1-201ENST00000329474 RANGAP1P46060 587 aaPredicted RBP15.72■□□□□ 0.11
CARMIL1-201ENST00000329474 ABCC9O60706 1549 aa15.6■□□□□ 0.09
CARMIL1-201ENST00000329474 ZCCHC6Q5VYS8 1495 aaKnown RBP15.51■□□□□ 0.07
CARMIL1-201ENST00000329474 APLP2Q06481 763 aa15.43■□□□□ 0.06
CARMIL1-201ENST00000329474 UBTFP17480 764 aaKnown RBP15.41■□□□□ 0.06
CARMIL1-201ENST00000329474 SCRIBQ14160 1630 aa15.38■□□□□ 0.05
CARMIL1-201ENST00000329474 HRCP23327 699 aa15.37■□□□□ 0.05
CARMIL1-201ENST00000329474 CCER1Q8TC90 406 aaPredicted RBP15.36■□□□□ 0.05
CARMIL1-201ENST00000329474 CCDC180Q9P1Z9 1646 aa15.36■□□□□ 0.05
CARMIL1-201ENST00000329474 PABPN1Q86U42 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
CARMIL1-201ENST00000329474 TRIM26Q12899 539 aaPredicted RBP15.31■□□□□ 0.04
CARMIL1-201ENST00000329474 MYO15BQ96JP2 1530 aa15.24■□□□□ 0.03
CARMIL1-201ENST00000329474 ZEB1P37275 1124 aaPredicted RBP15.22■□□□□ 0.03
CARMIL1-201ENST00000329474 ATP1B4Q9UN42 357 aaPredicted RBP15.22■□□□□ 0.03
CARMIL1-201ENST00000329474 PELP1Q8IZL8 1130 aaKnown RBP15.16■□□□□ 0.02
CARMIL1-201ENST00000329474 YTHDC1Q96MU7 727 aaKnown RBP15.09■□□□□ 0.01
CARMIL1-201ENST00000329474 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.08■□□□□ 0.01
CARMIL1-201ENST00000329474 HNRNPUL2Q1KMD3 747 aaKnown RBP15.03■□□□□ -0
CARMIL1-201ENST00000329474 ITGAEP38570 1179 aa15□□□□□ -0.01
CARMIL1-201ENST00000329474 MYT1Q01538 1121 aa15□□□□□ -0.01
CARMIL1-201ENST00000329474 CENPBP07199 599 aaPredicted RBP14.95□□□□□ -0.02
CARMIL1-201ENST00000329474 RSF1Q96T23 1441 aaPredicted RBP14.84□□□□□ -0.03
CARMIL1-201ENST00000329474 DCAF1Q9Y4B6 1507 aa14.75□□□□□ -0.05
CARMIL1-201ENST00000329474 CECR2Q9BXF3 1484 aa14.71□□□□□ -0.05
CARMIL1-201ENST00000329474 RB1CC1Q8TDY2 1594 aa14.69□□□□□ -0.06
CARMIL1-201ENST00000329474 DIEXFQ68CQ4 756 aaKnown RBP14.66□□□□□ -0.06
CARMIL1-201ENST00000329474 CSRNP3Q8WYN3 585 aa14.65□□□□□ -0.06
CARMIL1-201ENST00000329474 P3H3Q8IVL6 736 aa14.61□□□□□ -0.07
CARMIL1-201ENST00000329474 FAM50AQ14320 339 aaKnown RBP14.6□□□□□ -0.07
CARMIL1-201ENST00000329474 NACADO15069 1562 aa14.59□□□□□ -0.07
CARMIL1-201ENST00000329474 CNGB1Q14028 1251 aaPredicted RBP14.55□□□□□ -0.08
CARMIL1-201ENST00000329474 MROH2BQ7Z745 1585 aa14.55□□□□□ -0.08
CARMIL1-201ENST00000329474 NEUROD1Q13562 356 aa14.52□□□□□ -0.09
CARMIL1-201ENST00000329474 ARID3CA6NKF2 412 aa14.51□□□□□ -0.09
CARMIL1-201ENST00000329474 WIZO95785 1651 aa14.49□□□□□ -0.09
CARMIL1-201ENST00000329474 NEFLP07196 543 aa14.49□□□□□ -0.09
CARMIL1-201ENST00000329474 POLR3GLQ9BT43 218 aa14.47□□□□□ -0.09
CARMIL1-201ENST00000329474 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
CARMIL1-201ENST00000329474 ERICH6Q7L0X2 663 aa14.45□□□□□ -0.1
CARMIL1-201ENST00000329474 MYT1LQ9UL68 1186 aa14.43□□□□□ -0.1
CARMIL1-201ENST00000329474 CEP162Q5TB80 1403 aa14.4□□□□□ -0.1
CARMIL1-201ENST00000329474 GTF3C3Q9Y5Q9 886 aa14.4□□□□□ -0.1
CARMIL1-201ENST00000329474 FBLN2P98095 1184 aa14.39□□□□□ -0.11
CARMIL1-201ENST00000329474 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
CARMIL1-201ENST00000329474 SOGA1O94964 1423 aa14.38□□□□□ -0.11
CARMIL1-201ENST00000329474 ZNF316A6NFI3 1004 aaPredicted RBP14.37□□□□□ -0.11
CARMIL1-201ENST00000329474 CCDC88BA6NC98 1476 aa14.33□□□□□ -0.11
CARMIL1-201ENST00000329474 BAZ1BQ9UIG0 1483 aaKnown RBP14.33□□□□□ -0.11
CARMIL1-201ENST00000329474 TRIM52Q96A61 297 aa14.33□□□□□ -0.12
CARMIL1-201ENST00000329474 WRNQ14191 1432 aaPredicted RBP eCLIP14.33□□□□□ -0.12
CARMIL1-201ENST00000329474 CLIP1P30622 1438 aa14.31□□□□□ -0.12
CARMIL1-201ENST00000329474 NPM1P06748 294 aaKnown RBP eCLIP14.29□□□□□ -0.12
CARMIL1-201ENST00000329474 GOLGA3Q08378 1498 aa14.28□□□□□ -0.12
CARMIL1-201ENST00000329474 BCANQ96GW7 911 aa14.28□□□□□ -0.12
CARMIL1-201ENST00000329474 ACIN1Q9UKV3 1341 aaKnown RBP14.24□□□□□ -0.13
CARMIL1-201ENST00000329474 ERCC6Q03468 1493 aa14.21□□□□□ -0.14
CARMIL1-201ENST00000329474 ZNF326Q5BKZ1 582 aaKnown RBP14.2□□□□□ -0.14
CARMIL1-201ENST00000329474 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
CARMIL1-201ENST00000329474 TNIKQ9UKE5 1360 aa14.18□□□□□ -0.14
CARMIL1-201ENST00000329474 TOP2AP11388 1531 aaKnown RBP14.18□□□□□ -0.14
CARMIL1-201ENST00000329474 HIRIP3Q9BW71 556 aaPredicted RBP14.15□□□□□ -0.14
CARMIL1-201ENST00000329474 RUSC2Q8N2Y8 1516 aa14.15□□□□□ -0.14
CARMIL1-201ENST00000329474 SMARCA4P51532 1647 aa14.13□□□□□ -0.15
CARMIL1-201ENST00000329474 CEP164Q9UPV0 1460 aa14.13□□□□□ -0.15
CARMIL1-201ENST00000329474 MIER1Q8N108 512 aa14.12□□□□□ -0.15
CARMIL1-201ENST00000329474 CHIC2Q9UKJ5 165 aa14.12□□□□□ -0.15
CARMIL1-201ENST00000329474 ZNF777Q9ULD5 760 aaPredicted RBP14.12□□□□□ -0.15
CARMIL1-201ENST00000329474 EEA1Q15075 1411 aa14.1□□□□□ -0.15
CARMIL1-201ENST00000329474 ANP32CO43423 234 aa14.04□□□□□ -0.16
CARMIL1-201ENST00000329474 DDX10Q13206 875 aaKnown RBP14.04□□□□□ -0.16
CARMIL1-201ENST00000329474 KIF27Q86VH2 1401 aa14.02□□□□□ -0.17
CARMIL1-201ENST00000329474 SMARCA2P51531 1590 aa14□□□□□ -0.17
CARMIL1-201ENST00000329474 KANK4Q5T7N3 995 aaPredicted RBP14□□□□□ -0.17
CARMIL1-201ENST00000329474 ESF1Q9H501 851 aaKnown RBP13.99□□□□□ -0.17
CARMIL1-201ENST00000329474 CUX2O14529 1486 aa13.97□□□□□ -0.17
CARMIL1-201ENST00000329474 TRHP20396 242 aaPredicted RBP13.96□□□□□ -0.17
CARMIL1-201ENST00000329474 RRP7BPQ9NSQ0 103 aa13.96□□□□□ -0.17
CARMIL1-201ENST00000329474 RAPGEF2Q9Y4G8 1499 aa13.96□□□□□ -0.17
CARMIL1-201ENST00000329474 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.17
CARMIL1-201ENST00000329474 TONSLQ96HA7 1378 aa13.96□□□□□ -0.18
CARMIL1-201ENST00000329474 CHMP7Q8WUX9 453 aaPredicted RBP13.95□□□□□ -0.18
CARMIL1-201ENST00000329474 MTUS2Q5JR59 1369 aa13.95□□□□□ -0.18
CARMIL1-201ENST00000329474 ATAD2BQ9ULI0 1458 aa13.93□□□□□ -0.18
CARMIL1-201ENST00000329474 SIN3AQ96ST3 1273 aa13.93□□□□□ -0.18
CARMIL1-201ENST00000329474 VPS8Q8N3P4 1428 aa13.9□□□□□ -0.18
CARMIL1-201ENST00000329474 DAXXQ9UER7 740 aaPredicted RBP13.89□□□□□ -0.19
CARMIL1-201ENST00000329474 EIF4G1Q04637 1599 aaKnown RBP13.88□□□□□ -0.19
CARMIL1-201ENST00000329474 SENP3-EIF4A1A0A087X0R7 540 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms