RNA–Protein interactions for RNA: ENST00000296529.10

TMEM144-201, Transcript of transmembrane protein 144, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM144, Length 3,442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM144-201ENST00000296529 NISCHQ9Y2I1 1504 aa18.61■□□□□ 0.57
TMEM144-201ENST00000296529 CCDC180Q9P1Z9 1646 aa16.37■□□□□ 0.21
TMEM144-201ENST00000296529 ZCCHC6Q5VYS8 1495 aaKnown RBP15.74■□□□□ 0.11
TMEM144-201ENST00000296529 DCAF1Q9Y4B6 1507 aa15.66■□□□□ 0.1
TMEM144-201ENST00000296529 MYO15BQ96JP2 1530 aa15.45■□□□□ 0.06
TMEM144-201ENST00000296529 SHROOM4Q9ULL8 1493 aa15.15■□□□□ 0.02
TMEM144-201ENST00000296529 NACADO15069 1562 aa15.09■□□□□ 0.01
TMEM144-201ENST00000296529 SUPT5HO00267 1087 aaKnown RBP15.08■□□□□ 0
TMEM144-201ENST00000296529 DCAF8L2P0C7V8 631 aa15.04■□□□□ -0
TMEM144-201ENST00000296529 ABCC9O60706 1549 aa14.99□□□□□ -0.01
TMEM144-201ENST00000296529 RB1CC1Q8TDY2 1594 aa14.83□□□□□ -0.04
TMEM144-201ENST00000296529 SCRIBQ14160 1630 aa14.67□□□□□ -0.06
TMEM144-201ENST00000296529 EHMT2Q96KQ7 1210 aa14.63□□□□□ -0.07
TMEM144-201ENST00000296529 HRCP23327 699 aa14.56□□□□□ -0.08
TMEM144-201ENST00000296529 UNC13AQ9UPW8 1703 aa14.53□□□□□ -0.08
TMEM144-201ENST00000296529 PPARGC1BQ86YN6 1023 aaKnown RBP14.5□□□□□ -0.09
TMEM144-201ENST00000296529 PELP1Q8IZL8 1130 aaKnown RBP14.49□□□□□ -0.09
TMEM144-201ENST00000296529 PCGF6Q9BYE7 350 aa14.46□□□□□ -0.09
TMEM144-201ENST00000296529 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
TMEM144-201ENST00000296529 BAZ1AQ9NRL2 1556 aaPredicted RBP14.4□□□□□ -0.1
TMEM144-201ENST00000296529 BICRAQ9NZM4 1560 aa14.33□□□□□ -0.12
TMEM144-201ENST00000296529 PEG3Q9GZU2 1588 aa14.28□□□□□ -0.12
TMEM144-201ENST00000296529 SMARCA4P51532 1647 aa14.27□□□□□ -0.12
TMEM144-201ENST00000296529 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
TMEM144-201ENST00000296529 DNAJC5BQ9UF47 199 aa14.24□□□□□ -0.13
TMEM144-201ENST00000296529 CECR2Q9BXF3 1484 aa14.23□□□□□ -0.13
TMEM144-201ENST00000296529 TOP2AP11388 1531 aaKnown RBP14.19□□□□□ -0.14
TMEM144-201ENST00000296529 FAM9AQ8IZU1 332 aaPredicted RBP14.18□□□□□ -0.14
TMEM144-201ENST00000296529 LOC105371045A0A1W2PR82 267 aa14.18□□□□□ -0.14
TMEM144-201ENST00000296529 WIZO95785 1651 aa14.16□□□□□ -0.14
TMEM144-201ENST00000296529 EIF4G1Q04637 1599 aaKnown RBP14.11□□□□□ -0.15
TMEM144-201ENST00000296529 CHIC1Q5VXU3 224 aa14.09□□□□□ -0.15
TMEM144-201ENST00000296529 TTBK1Q5TCY1 1321 aaPredicted RBP14.09□□□□□ -0.15
TMEM144-201ENST00000296529 SCAF1Q9H7N4 1312 aaKnown RBP14.05□□□□□ -0.16
TMEM144-201ENST00000296529 SMARCA2P51531 1590 aa14.03□□□□□ -0.16
TMEM144-201ENST00000296529 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
TMEM144-201ENST00000296529 MYT1Q01538 1121 aa13.97□□□□□ -0.17
TMEM144-201ENST00000296529 HMGXB3Q12766 1538 aa13.94□□□□□ -0.18
TMEM144-201ENST00000296529 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
TMEM144-201ENST00000296529 CCDC88BA6NC98 1476 aa13.89□□□□□ -0.19
TMEM144-201ENST00000296529 NCAPD3P42695 1498 aa13.85□□□□□ -0.19
TMEM144-201ENST00000296529 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
TMEM144-201ENST00000296529 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
TMEM144-201ENST00000296529 EEA1Q15075 1411 aa13.7□□□□□ -0.22
TMEM144-201ENST00000296529 TRIM41Q8WV44 630 aa13.64□□□□□ -0.23
TMEM144-201ENST00000296529 BIVM-ERCC5R4GMW8 1640 aa13.63□□□□□ -0.23
TMEM144-201ENST00000296529 GTF3C3Q9Y5Q9 886 aa13.61□□□□□ -0.23
TMEM144-201ENST00000296529 RANGAP1P46060 587 aaPredicted RBP13.6□□□□□ -0.23
TMEM144-201ENST00000296529 NEUROD1Q13562 356 aa13.59□□□□□ -0.23
TMEM144-201ENST00000296529 CFTRP13569 1480 aa13.58□□□□□ -0.24
TMEM144-201ENST00000296529 TOP2BQ02880 1626 aa13.58□□□□□ -0.24
TMEM144-201ENST00000296529 ACIN1Q9UKV3 1341 aaKnown RBP13.57□□□□□ -0.24
TMEM144-201ENST00000296529 TRIM26Q12899 539 aaPredicted RBP13.57□□□□□ -0.24
TMEM144-201ENST00000296529 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
TMEM144-201ENST00000296529 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
TMEM144-201ENST00000296529 CC2D2AQ9P2K1 1620 aa13.53□□□□□ -0.24
TMEM144-201ENST00000296529 SYNJ1O43426 1573 aa13.51□□□□□ -0.25
TMEM144-201ENST00000296529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.51□□□□□ -0.25
TMEM144-201ENST00000296529 ZEB1P37275 1124 aaPredicted RBP13.51□□□□□ -0.25
TMEM144-201ENST00000296529 KIF21BO75037 1637 aa13.49□□□□□ -0.25
TMEM144-201ENST00000296529 YTHDC1Q96MU7 727 aaKnown RBP13.48□□□□□ -0.25
TMEM144-201ENST00000296529 CCER1Q8TC90 406 aaPredicted RBP13.44□□□□□ -0.26
TMEM144-201ENST00000296529 CENPBP07199 599 aaPredicted RBP13.42□□□□□ -0.26
TMEM144-201ENST00000296529 CADPSQ9ULU8 1353 aa13.39□□□□□ -0.27
TMEM144-201ENST00000296529 LAMC3Q9Y6N6 1575 aa13.39□□□□□ -0.27
TMEM144-201ENST00000296529 ERICH3Q5RHP9 1530 aa13.38□□□□□ -0.27
TMEM144-201ENST00000296529 TNIKQ9UKE5 1360 aa13.38□□□□□ -0.27
TMEM144-201ENST00000296529 CEP164Q9UPV0 1460 aa13.37□□□□□ -0.27
TMEM144-201ENST00000296529 GOLGA3Q08378 1498 aa13.36□□□□□ -0.27
TMEM144-201ENST00000296529 CUX1P39880 1505 aa13.36□□□□□ -0.27
TMEM144-201ENST00000296529 SOGA1O94964 1423 aa13.33□□□□□ -0.28
TMEM144-201ENST00000296529 DNAJC5Q9H3Z4 198 aa13.32□□□□□ -0.28
TMEM144-201ENST00000296529 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
TMEM144-201ENST00000296529 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
TMEM144-201ENST00000296529 PRXQ9BXM0 1461 aa13.27□□□□□ -0.29
TMEM144-201ENST00000296529 BCL11AQ9H165 835 aa13.26□□□□□ -0.29
TMEM144-201ENST00000296529 DIEXFQ68CQ4 756 aaKnown RBP13.23□□□□□ -0.29
TMEM144-201ENST00000296529 RUSC2Q8N2Y8 1516 aa13.23□□□□□ -0.29
TMEM144-201ENST00000296529 KIF27Q86VH2 1401 aa13.22□□□□□ -0.29
TMEM144-201ENST00000296529 FANCD2Q9BXW9 1451 aa13.22□□□□□ -0.29
TMEM144-201ENST00000296529 WDR97A6NE52 1622 aa13.21□□□□□ -0.3
TMEM144-201ENST00000296529 CEP162Q5TB80 1403 aa13.2□□□□□ -0.3
TMEM144-201ENST00000296529 UBTFP17480 764 aaKnown RBP13.2□□□□□ -0.3
TMEM144-201ENST00000296529 HNRNPUL2Q1KMD3 747 aaKnown RBP13.18□□□□□ -0.3
TMEM144-201ENST00000296529 ABCA10Q8WWZ4 1543 aa13.17□□□□□ -0.3
TMEM144-201ENST00000296529 CUL7Q14999 1698 aa13.15□□□□□ -0.31
TMEM144-201ENST00000296529 PDS5BQ9NTI5 1447 aa13.14□□□□□ -0.31
TMEM144-201ENST00000296529 TOPBP1Q92547 1522 aa13.14□□□□□ -0.31
TMEM144-201ENST00000296529 FGD5Q6ZNL6 1462 aa13.14□□□□□ -0.31
TMEM144-201ENST00000296529 RAPGEF2Q9Y4G8 1499 aa13.11□□□□□ -0.31
TMEM144-201ENST00000296529 ABCA5Q8WWZ7 1642 aa13.08□□□□□ -0.32
TMEM144-201ENST00000296529 POLA1P09884 1462 aaPredicted RBP13.06□□□□□ -0.32
TMEM144-201ENST00000296529 VPS8Q8N3P4 1428 aa13.06□□□□□ -0.32
TMEM144-201ENST00000296529 KIF21AQ7Z4S6 1674 aa13.05□□□□□ -0.32
TMEM144-201ENST00000296529 URB2Q14146 1524 aaKnown RBP13.05□□□□□ -0.32
TMEM144-201ENST00000296529 CLIP1P30622 1438 aa13.05□□□□□ -0.32
TMEM144-201ENST00000296529 CUX2O14529 1486 aa13.03□□□□□ -0.32
TMEM144-201ENST00000296529 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
TMEM144-201ENST00000296529 IGF1RP08069 1367 aa13.03□□□□□ -0.32
TMEM144-201ENST00000296529 ERCC6Q03468 1493 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms