RNA–Protein interactions for RNA: ENST00000222567.5

TWISTNB-201, Transcript of TWIST neighbor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TWISTNB, Length 3,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNB-201ENST00000222567 NISCHQ9Y2I1 1504 aa20.41■□□□□ 0.86
TWISTNB-201ENST00000222567 DCAF8L2P0C7V8 631 aa19.38■□□□□ 0.69
TWISTNB-201ENST00000222567 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
TWISTNB-201ENST00000222567 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
TWISTNB-201ENST00000222567 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
TWISTNB-201ENST00000222567 ABCC9O60706 1549 aa17.48■□□□□ 0.39
TWISTNB-201ENST00000222567 FAM9AQ8IZU1 332 aaPredicted RBP17.25■□□□□ 0.35
TWISTNB-201ENST00000222567 PABPN1Q86U42 306 aaKnown RBP eCLIP17.13■□□□□ 0.33
TWISTNB-201ENST00000222567 ZCCHC6Q5VYS8 1495 aaKnown RBP16.97■□□□□ 0.31
TWISTNB-201ENST00000222567 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
TWISTNB-201ENST00000222567 CCDC180Q9P1Z9 1646 aa16.89■□□□□ 0.29
TWISTNB-201ENST00000222567 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
TWISTNB-201ENST00000222567 TTBK1Q5TCY1 1321 aaPredicted RBP16.81■□□□□ 0.28
TWISTNB-201ENST00000222567 RANGAP1P46060 587 aaPredicted RBP16.79■□□□□ 0.28
TWISTNB-201ENST00000222567 LOC105371045A0A1W2PR82 267 aa16.77■□□□□ 0.27
TWISTNB-201ENST00000222567 SCRIBQ14160 1630 aa16.74■□□□□ 0.27
TWISTNB-201ENST00000222567 PCGF6Q9BYE7 350 aa16.63■□□□□ 0.25
TWISTNB-201ENST00000222567 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
TWISTNB-201ENST00000222567 UBTFP17480 764 aaKnown RBP16.5■□□□□ 0.23
TWISTNB-201ENST00000222567 APLP2Q06481 763 aa16.28■□□□□ 0.2
TWISTNB-201ENST00000222567 ATP1B4Q9UN42 357 aaPredicted RBP16.28■□□□□ 0.2
TWISTNB-201ENST00000222567 CECR2Q9BXF3 1484 aa16.26■□□□□ 0.19
TWISTNB-201ENST00000222567 RSF1Q96T23 1441 aaPredicted RBP16.25■□□□□ 0.19
TWISTNB-201ENST00000222567 RB1CC1Q8TDY2 1594 aa16.24■□□□□ 0.19
TWISTNB-201ENST00000222567 NACADO15069 1562 aa16.2■□□□□ 0.18
TWISTNB-201ENST00000222567 DCAF1Q9Y4B6 1507 aa16.17■□□□□ 0.18
TWISTNB-201ENST00000222567 MYO15BQ96JP2 1530 aa16.04■□□□□ 0.16
TWISTNB-201ENST00000222567 MROH2BQ7Z745 1585 aa15.98■□□□□ 0.15
TWISTNB-201ENST00000222567 CCER1Q8TC90 406 aaPredicted RBP15.95■□□□□ 0.14
TWISTNB-201ENST00000222567 TRIM26Q12899 539 aaPredicted RBP15.95■□□□□ 0.14
TWISTNB-201ENST00000222567 ITGAEP38570 1179 aa15.93■□□□□ 0.14
TWISTNB-201ENST00000222567 CSRNP3Q8WYN3 585 aa15.9■□□□□ 0.14
TWISTNB-201ENST00000222567 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
TWISTNB-201ENST00000222567 P3H3Q8IVL6 736 aa15.83■□□□□ 0.12
TWISTNB-201ENST00000222567 BAZ1AQ9NRL2 1556 aaPredicted RBP15.79■□□□□ 0.12
TWISTNB-201ENST00000222567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.78■□□□□ 0.12
TWISTNB-201ENST00000222567 WIZO95785 1651 aa15.77■□□□□ 0.12
TWISTNB-201ENST00000222567 FBLN2P98095 1184 aa15.75■□□□□ 0.11
TWISTNB-201ENST00000222567 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
TWISTNB-201ENST00000222567 ARID3CA6NKF2 412 aa15.72■□□□□ 0.11
TWISTNB-201ENST00000222567 HRCP23327 699 aa15.72■□□□□ 0.11
TWISTNB-201ENST00000222567 CCDC88BA6NC98 1476 aa15.68■□□□□ 0.1
TWISTNB-201ENST00000222567 ABCC8Q09428 1581 aa15.62■□□□□ 0.09
TWISTNB-201ENST00000222567 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.09
TWISTNB-201ENST00000222567 SOGA1O94964 1423 aa15.58■□□□□ 0.08
TWISTNB-201ENST00000222567 FAM50AQ14320 339 aaKnown RBP15.54■□□□□ 0.08
TWISTNB-201ENST00000222567 ZEB1P37275 1124 aaPredicted RBP15.52■□□□□ 0.08
TWISTNB-201ENST00000222567 ATAD2BQ9ULI0 1458 aa15.5■□□□□ 0.07
TWISTNB-201ENST00000222567 SMARCA4P51532 1647 aa15.49■□□□□ 0.07
TWISTNB-201ENST00000222567 TOP2AP11388 1531 aaKnown RBP15.42■□□□□ 0.06
TWISTNB-201ENST00000222567 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
TWISTNB-201ENST00000222567 RUSC2Q8N2Y8 1516 aa15.38■□□□□ 0.05
TWISTNB-201ENST00000222567 SMARCA2P51531 1590 aa15.37■□□□□ 0.05
TWISTNB-201ENST00000222567 CEP162Q5TB80 1403 aa15.37■□□□□ 0.05
TWISTNB-201ENST00000222567 YTHDC1Q96MU7 727 aaKnown RBP15.35■□□□□ 0.05
TWISTNB-201ENST00000222567 CLIP1P30622 1438 aa15.34■□□□□ 0.05
TWISTNB-201ENST00000222567 MYT1LQ9UL68 1186 aa15.34■□□□□ 0.05
TWISTNB-201ENST00000222567 NEUROD1Q13562 356 aa15.3■□□□□ 0.04
TWISTNB-201ENST00000222567 BICRAQ9NZM4 1560 aa15.3■□□□□ 0.04
TWISTNB-201ENST00000222567 TDRD9Q8NDG6 1382 aaKnown RBP15.26■□□□□ 0.03
TWISTNB-201ENST00000222567 KIF27Q86VH2 1401 aa15.26■□□□□ 0.03
TWISTNB-201ENST00000222567 CUX2O14529 1486 aa15.26■□□□□ 0.03
TWISTNB-201ENST00000222567 GOLGA3Q08378 1498 aa15.26■□□□□ 0.03
TWISTNB-201ENST00000222567 CHMP7Q8WUX9 453 aaPredicted RBP15.25■□□□□ 0.03
TWISTNB-201ENST00000222567 CNGB1Q14028 1251 aaPredicted RBP15.25■□□□□ 0.03
TWISTNB-201ENST00000222567 CADPSQ9ULU8 1353 aa15.25■□□□□ 0.03
TWISTNB-201ENST00000222567 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
TWISTNB-201ENST00000222567 ZNF777Q9ULD5 760 aaPredicted RBP15.24■□□□□ 0.03
TWISTNB-201ENST00000222567 TRIM52Q96A61 297 aa15.23■□□□□ 0.03
TWISTNB-201ENST00000222567 TNIKQ9UKE5 1360 aa15.22■□□□□ 0.03
TWISTNB-201ENST00000222567 EEA1Q15075 1411 aa15.2■□□□□ 0.02
TWISTNB-201ENST00000222567 CHIC2Q9UKJ5 165 aa15.18■□□□□ 0.02
TWISTNB-201ENST00000222567 ERCC6Q03468 1493 aa15.17■□□□□ 0.02
TWISTNB-201ENST00000222567 CEP164Q9UPV0 1460 aa15.17■□□□□ 0.02
TWISTNB-201ENST00000222567 POLR3GLQ9BT43 218 aa15.17■□□□□ 0.02
TWISTNB-201ENST00000222567 CARMIL1Q5VZK9 1371 aa15.16■□□□□ 0.02
TWISTNB-201ENST00000222567 UNC13AQ9UPW8 1703 aa15.14■□□□□ 0.01
TWISTNB-201ENST00000222567 NCAPD3P42695 1498 aa15.13■□□□□ 0.01
TWISTNB-201ENST00000222567 NESP48681 1621 aa15.11■□□□□ 0.01
TWISTNB-201ENST00000222567 RAPGEF2Q9Y4G8 1499 aa15.11■□□□□ 0.01
TWISTNB-201ENST00000222567 KANK4Q5T7N3 995 aaPredicted RBP15.11■□□□□ 0.01
TWISTNB-201ENST00000222567 DIEXFQ68CQ4 756 aaKnown RBP15.08■□□□□ 0
TWISTNB-201ENST00000222567 FANCD2Q9BXW9 1451 aa15.06■□□□□ 0
TWISTNB-201ENST00000222567 PDS5BQ9NTI5 1447 aa15.05■□□□□ -0
TWISTNB-201ENST00000222567 ZNF326Q5BKZ1 582 aaKnown RBP15.05■□□□□ -0
TWISTNB-201ENST00000222567 MTUS2Q5JR59 1369 aa15.04■□□□□ -0
TWISTNB-201ENST00000222567 RAD54L2Q9Y4B4 1467 aa15.03■□□□□ -0
TWISTNB-201ENST00000222567 CC2D2AQ9P2K1 1620 aa15.03■□□□□ -0
TWISTNB-201ENST00000222567 KCNH8Q96L42 1107 aa15□□□□□ -0.01
TWISTNB-201ENST00000222567 RRP7BPQ9NSQ0 103 aa14.99□□□□□ -0.01
TWISTNB-201ENST00000222567 CDK11AQ9UQ88 783 aaPredicted RBP14.98□□□□□ -0.01
TWISTNB-201ENST00000222567 SYNJ1O43426 1573 aa14.97□□□□□ -0.01
TWISTNB-201ENST00000222567 CENPBP07199 599 aaPredicted RBP14.95□□□□□ -0.02
TWISTNB-201ENST00000222567 HIRIP3Q9BW71 556 aaPredicted RBP14.95□□□□□ -0.02
TWISTNB-201ENST00000222567 FGD5Q6ZNL6 1462 aa14.94□□□□□ -0.02
TWISTNB-201ENST00000222567 IGF1RP08069 1367 aa14.93□□□□□ -0.02
TWISTNB-201ENST00000222567 CFTRP13569 1480 aa14.92□□□□□ -0.02
TWISTNB-201ENST00000222567 VPS8Q8N3P4 1428 aa14.91□□□□□ -0.02
TWISTNB-201ENST00000222567 ZNF316A6NFI3 1004 aaPredicted RBP14.89□□□□□ -0.03
TWISTNB-201ENST00000222567 FHOD3Q2V2M9 1422 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms