RNA–Protein interactions for RNA: ENST00000486911.2

C9orf85-206, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5 BASIC

Gene C9orf85, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-206ENST00000486911 NISCHQ9Y2I1 1504 aa18.85■□□□□ 0.61
C9orf85-206ENST00000486911 HRCP23327 699 aa17.44■□□□□ 0.38
C9orf85-206ENST00000486911 PPARGC1BQ86YN6 1023 aaKnown RBP17.18■□□□□ 0.34
C9orf85-206ENST00000486911 PCGF6Q9BYE7 350 aa17.13■□□□□ 0.33
C9orf85-206ENST00000486911 SUPT5HO00267 1087 aaKnown RBP17.11■□□□□ 0.33
C9orf85-206ENST00000486911 SHROOM4Q9ULL8 1493 aa17.08■□□□□ 0.33
C9orf85-206ENST00000486911 PELP1Q8IZL8 1130 aaKnown RBP16.96■□□□□ 0.31
C9orf85-206ENST00000486911 MYO15BQ96JP2 1530 aa16.82■□□□□ 0.28
C9orf85-206ENST00000486911 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.27
C9orf85-206ENST00000486911 SCAF1Q9H7N4 1312 aaKnown RBP16.59■□□□□ 0.25
C9orf85-206ENST00000486911 LOC105371045A0A1W2PR82 267 aa16.48■□□□□ 0.23
C9orf85-206ENST00000486911 TRIM26Q12899 539 aaPredicted RBP16.45■□□□□ 0.22
C9orf85-206ENST00000486911 DCAF1Q9Y4B6 1507 aa16.43■□□□□ 0.22
C9orf85-206ENST00000486911 ZEB1P37275 1124 aaPredicted RBP16.33■□□□□ 0.2
C9orf85-206ENST00000486911 MYT1Q01538 1121 aa16.3■□□□□ 0.2
C9orf85-206ENST00000486911 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
C9orf85-206ENST00000486911 ACIN1Q9UKV3 1341 aaKnown RBP16.14■□□□□ 0.17
C9orf85-206ENST00000486911 NEUROD1Q13562 356 aa16.12■□□□□ 0.17
C9orf85-206ENST00000486911 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
C9orf85-206ENST00000486911 GTF3C3Q9Y5Q9 886 aa16.07■□□□□ 0.16
C9orf85-206ENST00000486911 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
C9orf85-206ENST00000486911 CENPBP07199 599 aaPredicted RBP15.94■□□□□ 0.14
C9orf85-206ENST00000486911 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
C9orf85-206ENST00000486911 FAM9AQ8IZU1 332 aaPredicted RBP15.86■□□□□ 0.13
C9orf85-206ENST00000486911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.83■□□□□ 0.13
C9orf85-206ENST00000486911 DIEXFQ68CQ4 756 aaKnown RBP15.83■□□□□ 0.13
C9orf85-206ENST00000486911 CCER1Q8TC90 406 aaPredicted RBP15.8■□□□□ 0.12
C9orf85-206ENST00000486911 TRIM41Q8WV44 630 aa15.74■□□□□ 0.11
C9orf85-206ENST00000486911 YTHDC1Q96MU7 727 aaKnown RBP15.69■□□□□ 0.1
C9orf85-206ENST00000486911 TTBK1Q5TCY1 1321 aaPredicted RBP15.51■□□□□ 0.07
C9orf85-206ENST00000486911 ZNF316A6NFI3 1004 aaPredicted RBP15.47■□□□□ 0.07
C9orf85-206ENST00000486911 MIER1Q8N108 512 aa15.43■□□□□ 0.06
C9orf85-206ENST00000486911 BCL11AQ9H165 835 aa15.34■□□□□ 0.05
C9orf85-206ENST00000486911 RSF1Q96T23 1441 aaPredicted RBP15.3■□□□□ 0.04
C9orf85-206ENST00000486911 ANP32EQ9BTT0 268 aa15.27■□□□□ 0.03
C9orf85-206ENST00000486911 ABCC9O60706 1549 aa15.23■□□□□ 0.03
C9orf85-206ENST00000486911 SUPT16HQ9Y5B9 1047 aaKnown RBP15.22■□□□□ 0.03
C9orf85-206ENST00000486911 RB1CC1Q8TDY2 1594 aa15.21■□□□□ 0.03
C9orf85-206ENST00000486911 PRKCSHP14314 528 aaPredicted RBP15.21■□□□□ 0.03
C9orf85-206ENST00000486911 TSHZ2Q9NRE2 1034 aa15.19■□□□□ 0.02
C9orf85-206ENST00000486911 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
C9orf85-206ENST00000486911 HNRNPUL2Q1KMD3 747 aaKnown RBP15.11■□□□□ 0.01
C9orf85-206ENST00000486911 CLSPNQ9HAW4 1339 aa15.07■□□□□ 0
C9orf85-206ENST00000486911 WRNQ14191 1432 aaPredicted RBP eCLIP15.03■□□□□ -0
C9orf85-206ENST00000486911 CEP162Q5TB80 1403 aa15.01□□□□□ -0.01
C9orf85-206ENST00000486911 BCANQ96GW7 911 aa15□□□□□ -0.01
C9orf85-206ENST00000486911 UBTFP17480 764 aaKnown RBP14.97□□□□□ -0.01
C9orf85-206ENST00000486911 SCRIBQ14160 1630 aa14.96□□□□□ -0.01
C9orf85-206ENST00000486911 TNIKQ9UKE5 1360 aa14.87□□□□□ -0.03
C9orf85-206ENST00000486911 FKBP8Q14318 412 aa14.86□□□□□ -0.03
C9orf85-206ENST00000486911 CECR2Q9BXF3 1484 aa14.85□□□□□ -0.03
C9orf85-206ENST00000486911 RBM19Q9Y4C8 960 aaKnown RBP14.84□□□□□ -0.03
C9orf85-206ENST00000486911 KCNH8Q96L42 1107 aa14.82□□□□□ -0.04
C9orf85-206ENST00000486911 CCDC88BA6NC98 1476 aa14.81□□□□□ -0.04
C9orf85-206ENST00000486911 SOGA1O94964 1423 aa14.8□□□□□ -0.04
C9orf85-206ENST00000486911 MROH2BQ7Z745 1585 aa14.79□□□□□ -0.04
C9orf85-206ENST00000486911 APLP2Q06481 763 aa14.79□□□□□ -0.04
C9orf85-206ENST00000486911 ABCC8Q09428 1581 aa14.76□□□□□ -0.05
C9orf85-206ENST00000486911 ITGAEP38570 1179 aa14.75□□□□□ -0.05
C9orf85-206ENST00000486911 NEFLP07196 543 aa14.72□□□□□ -0.05
C9orf85-206ENST00000486911 WIZO95785 1651 aa14.71□□□□□ -0.05
C9orf85-206ENST00000486911 RANGAP1P46060 587 aaPredicted RBP14.71□□□□□ -0.06
C9orf85-206ENST00000486911 MSH5O43196 834 aa14.7□□□□□ -0.06
C9orf85-206ENST00000486911 RUSC2Q8N2Y8 1516 aa14.7□□□□□ -0.06
C9orf85-206ENST00000486911 DHX57Q6P158 1386 aaKnown RBP14.66□□□□□ -0.06
C9orf85-206ENST00000486911 ERICH6Q7L0X2 663 aa14.66□□□□□ -0.06
C9orf85-206ENST00000486911 GOLGA3Q08378 1498 aa14.64□□□□□ -0.07
C9orf85-206ENST00000486911 SLC24A1O60721 1099 aa14.64□□□□□ -0.07
C9orf85-206ENST00000486911 EIF4G1Q04637 1599 aaKnown RBP14.62□□□□□ -0.07
C9orf85-206ENST00000486911 CLIP1P30622 1438 aa14.6□□□□□ -0.07
C9orf85-206ENST00000486911 EEA1Q15075 1411 aa14.6□□□□□ -0.07
C9orf85-206ENST00000486911 TRIM52Q96A61 297 aa14.6□□□□□ -0.07
C9orf85-206ENST00000486911 DDX10Q13206 875 aaKnown RBP14.59□□□□□ -0.07
C9orf85-206ENST00000486911 VPS8Q8N3P4 1428 aa14.55□□□□□ -0.08
C9orf85-206ENST00000486911 BAZ1AQ9NRL2 1556 aaPredicted RBP14.54□□□□□ -0.08
C9orf85-206ENST00000486911 FANCIQ9NVI1 1328 aa14.5□□□□□ -0.09
C9orf85-206ENST00000486911 DEKP35659 375 aaKnown RBP14.5□□□□□ -0.09
C9orf85-206ENST00000486911 CDK11AQ9UQ88 783 aaPredicted RBP14.5□□□□□ -0.09
C9orf85-206ENST00000486911 IRX6P78412 446 aaPredicted RBP14.48□□□□□ -0.09
C9orf85-206ENST00000486911 CEP164Q9UPV0 1460 aa14.47□□□□□ -0.09
C9orf85-206ENST00000486911 HIRIP3Q9BW71 556 aaPredicted RBP14.45□□□□□ -0.1
C9orf85-206ENST00000486911 KANK4Q5T7N3 995 aaPredicted RBP14.44□□□□□ -0.1
C9orf85-206ENST00000486911 ANO8Q9HCE9 1232 aaPredicted RBP14.42□□□□□ -0.1
C9orf85-206ENST00000486911 ANP32CO43423 234 aa14.41□□□□□ -0.1
C9orf85-206ENST00000486911 MYT1LQ9UL68 1186 aa14.41□□□□□ -0.1
C9orf85-206ENST00000486911 NACADO15069 1562 aa14.39□□□□□ -0.11
C9orf85-206ENST00000486911 PPP1R15AO75807 674 aaPredicted RBP14.38□□□□□ -0.11
C9orf85-206ENST00000486911 TOP2AP11388 1531 aaKnown RBP14.38□□□□□ -0.11
C9orf85-206ENST00000486911 NBR1Q14596 966 aa14.38□□□□□ -0.11
C9orf85-206ENST00000486911 CCER2I3L3R5 266 aa14.37□□□□□ -0.11
C9orf85-206ENST00000486911 SMARCA2P51531 1590 aa14.37□□□□□ -0.11
C9orf85-206ENST00000486911 SIN3AQ96ST3 1273 aa14.36□□□□□ -0.11
C9orf85-206ENST00000486911 KIF21BO75037 1637 aa14.36□□□□□ -0.11
C9orf85-206ENST00000486911 RAPGEF2Q9Y4G8 1499 aa14.36□□□□□ -0.11
C9orf85-206ENST00000486911 HNRNPUQ00839 825 aaKnown RBP eCLIP14.33□□□□□ -0.12
C9orf85-206ENST00000486911 RAB3GAP2Q9H2M9 1393 aa14.29□□□□□ -0.12
C9orf85-206ENST00000486911 CCNB3Q8WWL7 1395 aa14.29□□□□□ -0.12
C9orf85-206ENST00000486911 SALL2Q9Y467 1007 aaPredicted RBP14.28□□□□□ -0.12
C9orf85-206ENST00000486911 BAZ1BQ9UIG0 1483 aaKnown RBP14.27□□□□□ -0.12
C9orf85-206ENST00000486911 NOP58Q9Y2X3 529 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms