RNA–Protein interactions for RNA: ENST00000338432.11

ACACB-201, Transcript of acetyl-CoA carboxylase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACACB, Length 9,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACB-201ENST00000338432 PELP1Q8IZL8 1130 aaKnown RBP18.4■□□□□ 0.54
ACACB-201ENST00000338432 MYT1Q01538 1121 aa18.01■□□□□ 0.47
ACACB-201ENST00000338432 CCER1Q8TC90 406 aaPredicted RBP17.42■□□□□ 0.38
ACACB-201ENST00000338432 NISCHQ9Y2I1 1504 aa17.24■□□□□ 0.35
ACACB-201ENST00000338432 DCAF8L2P0C7V8 631 aa17.22■□□□□ 0.35
ACACB-201ENST00000338432 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.34
ACACB-201ENST00000338432 ZEB1P37275 1124 aaPredicted RBP17.17■□□□□ 0.34
ACACB-201ENST00000338432 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
ACACB-201ENST00000338432 YTHDC1Q96MU7 727 aaKnown RBP16.96■□□□□ 0.31
ACACB-201ENST00000338432 APLP2Q06481 763 aa16.96■□□□□ 0.31
ACACB-201ENST00000338432 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
ACACB-201ENST00000338432 FAM9AQ8IZU1 332 aaPredicted RBP16.8■□□□□ 0.28
ACACB-201ENST00000338432 NEFLP07196 543 aa16.72■□□□□ 0.27
ACACB-201ENST00000338432 TTBK1Q5TCY1 1321 aaPredicted RBP16.6■□□□□ 0.25
ACACB-201ENST00000338432 PCGF6Q9BYE7 350 aa16.41■□□□□ 0.22
ACACB-201ENST00000338432 DAXXQ9UER7 740 aaPredicted RBP16.36■□□□□ 0.21
ACACB-201ENST00000338432 SHROOM4Q9ULL8 1493 aa16.3■□□□□ 0.2
ACACB-201ENST00000338432 RTL5Q5HYW3 569 aaPredicted RBP16.11■□□□□ 0.17
ACACB-201ENST00000338432 TRIM26Q12899 539 aaPredicted RBP16.04■□□□□ 0.16
ACACB-201ENST00000338432 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
ACACB-201ENST00000338432 CLSPNQ9HAW4 1339 aa15.95■□□□□ 0.14
ACACB-201ENST00000338432 HRCP23327 699 aa15.94■□□□□ 0.14
ACACB-201ENST00000338432 ZNF316A6NFI3 1004 aaPredicted RBP15.91■□□□□ 0.14
ACACB-201ENST00000338432 MYT1LQ9UL68 1186 aa15.88■□□□□ 0.13
ACACB-201ENST00000338432 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
ACACB-201ENST00000338432 UBTFP17480 764 aaKnown RBP15.77■□□□□ 0.12
ACACB-201ENST00000338432 GLIPR1L2Q4G1C9 344 aa15.76■□□□□ 0.11
ACACB-201ENST00000338432 DIEXFQ68CQ4 756 aaKnown RBP15.56■□□□□ 0.08
ACACB-201ENST00000338432 CDK11AQ9UQ88 783 aaPredicted RBP15.53■□□□□ 0.08
ACACB-201ENST00000338432 ATP1B4Q9UN42 357 aaPredicted RBP15.48■□□□□ 0.07
ACACB-201ENST00000338432 ANP32BQ92688 251 aaKnown RBP15.46■□□□□ 0.07
ACACB-201ENST00000338432 ANP32AP39687 249 aaKnown RBP15.44■□□□□ 0.06
ACACB-201ENST00000338432 ZBTB47Q9UFB7 747 aaPredicted RBP15.36■□□□□ 0.05
ACACB-201ENST00000338432 RANGAP1P46060 587 aaPredicted RBP15.31■□□□□ 0.04
ACACB-201ENST00000338432 ANP32CO43423 234 aa15.3■□□□□ 0.04
ACACB-201ENST00000338432 NEFMP07197 916 aa15.27■□□□□ 0.04
ACACB-201ENST00000338432 GTF3C3Q9Y5Q9 886 aa15.23■□□□□ 0.03
ACACB-201ENST00000338432 UPF2Q9HAU5 1272 aaKnown RBP15.18■□□□□ 0.02
ACACB-201ENST00000338432 ANP32EQ9BTT0 268 aa15.17■□□□□ 0.02
ACACB-201ENST00000338432 ACIN1Q9UKV3 1341 aaKnown RBP15.17■□□□□ 0.02
ACACB-201ENST00000338432 DCAF1Q9Y4B6 1507 aa15.14■□□□□ 0.01
ACACB-201ENST00000338432 POLR3GLQ9BT43 218 aa15.14■□□□□ 0.01
ACACB-201ENST00000338432 CCDC180Q9P1Z9 1646 aa15.11■□□□□ 0.01
ACACB-201ENST00000338432 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
ACACB-201ENST00000338432 CANXP27824 592 aaKnown RBP15.08■□□□□ 0
ACACB-201ENST00000338432 TNNT2P45379 298 aaPredicted RBP15.08■□□□□ 0
ACACB-201ENST00000338432 EIF5BO60841 1220 aaKnown RBP15.05■□□□□ -0
ACACB-201ENST00000338432 HNRNPUL2Q1KMD3 747 aaKnown RBP15.05■□□□□ -0
ACACB-201ENST00000338432 HSP90AA1P07900 732 aaKnown RBP15.02□□□□□ -0.01
ACACB-201ENST00000338432 ITGAEP38570 1179 aa15□□□□□ -0.01
ACACB-201ENST00000338432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
ACACB-201ENST00000338432 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
ACACB-201ENST00000338432 TRIM44Q96DX7 344 aaPredicted RBP14.93□□□□□ -0.02
ACACB-201ENST00000338432 PPARGC1BQ86YN6 1023 aaKnown RBP14.9□□□□□ -0.02
ACACB-201ENST00000338432 DDRGK1Q96HY6 314 aa14.9□□□□□ -0.02
ACACB-201ENST00000338432 NCLP19338 710 aaKnown RBP14.89□□□□□ -0.03
ACACB-201ENST00000338432 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.87□□□□□ -0.03
ACACB-201ENST00000338432 FAM50AQ14320 339 aaKnown RBP14.86□□□□□ -0.03
ACACB-201ENST00000338432 BECN1Q14457 450 aa14.85□□□□□ -0.03
ACACB-201ENST00000338432 BCANQ96GW7 911 aa14.84□□□□□ -0.03
ACACB-201ENST00000338432 ERICH6BQ5W0A0 696 aa14.84□□□□□ -0.03
ACACB-201ENST00000338432 GOLGA6L22H0YM25 854 aa14.79□□□□□ -0.04
ACACB-201ENST00000338432 TRIM52Q96A61 297 aa14.79□□□□□ -0.04
ACACB-201ENST00000338432 LOC105371045A0A1W2PR82 267 aa14.78□□□□□ -0.04
ACACB-201ENST00000338432 TONSLQ96HA7 1378 aa14.77□□□□□ -0.05
ACACB-201ENST00000338432 CDK11BP21127 795 aaKnown RBP14.72□□□□□ -0.05
ACACB-201ENST00000338432 CCDC136Q96JN2 1154 aa14.71□□□□□ -0.06
ACACB-201ENST00000338432 NEUROD1Q13562 356 aa14.7□□□□□ -0.06
ACACB-201ENST00000338432 MYH16Q9H6N6 1097 aa14.68□□□□□ -0.06
ACACB-201ENST00000338432 NPM2Q86SE8 214 aaKnown RBP14.67□□□□□ -0.06
ACACB-201ENST00000338432 FKBP8Q14318 412 aa14.67□□□□□ -0.06
ACACB-201ENST00000338432 PPM1GO15355 546 aaPredicted RBP14.67□□□□□ -0.06
ACACB-201ENST00000338432 CNGB1Q14028 1251 aaPredicted RBP14.63□□□□□ -0.07
ACACB-201ENST00000338432 GOLGA6L6A8MZA4 724 aa14.61□□□□□ -0.07
ACACB-201ENST00000338432 ARID4BQ4LE39 1312 aaPredicted RBP14.61□□□□□ -0.07
ACACB-201ENST00000338432 NRDCO43847 1150 aa14.6□□□□□ -0.07
ACACB-201ENST00000338432 HNRNPUQ00839 825 aaKnown RBP eCLIP14.59□□□□□ -0.07
ACACB-201ENST00000338432 CHAF1AQ13111 956 aaPredicted RBP14.57□□□□□ -0.08
ACACB-201ENST00000338432 ZNF326Q5BKZ1 582 aaKnown RBP14.57□□□□□ -0.08
ACACB-201ENST00000338432 CASC1Q6TDU7 716 aa14.56□□□□□ -0.08
ACACB-201ENST00000338432 EEA1Q15075 1411 aa14.56□□□□□ -0.08
ACACB-201ENST00000338432 PTMSP20962 102 aa14.56□□□□□ -0.08
ACACB-201ENST00000338432 NBR1Q14596 966 aa14.56□□□□□ -0.08
ACACB-201ENST00000338432 ZRSR1Q15695 479 aaKnown RBP14.54□□□□□ -0.08
ACACB-201ENST00000338432 CHMP4BQ9H444 224 aaKnown RBP14.54□□□□□ -0.08
ACACB-201ENST00000338432 CFAP44Q96MT7 982 aa14.52□□□□□ -0.09
ACACB-201ENST00000338432 L1TD1Q5T7N2 865 aaKnown RBP14.51□□□□□ -0.09
ACACB-201ENST00000338432 TMC1Q8TDI8 760 aa14.5□□□□□ -0.09
ACACB-201ENST00000338432 WDR43Q15061 677 aaKnown RBP eCLIP14.48□□□□□ -0.09
ACACB-201ENST00000338432 PTMAP06454 111 aaKnown RBP14.47□□□□□ -0.09
ACACB-201ENST00000338432 USP35Q9P2H5 1018 aa14.44□□□□□ -0.1
ACACB-201ENST00000338432 SLC24A1O60721 1099 aa14.42□□□□□ -0.1
ACACB-201ENST00000338432 DNTTIP2Q5QJE6 756 aaKnown RBP14.42□□□□□ -0.1
ACACB-201ENST00000338432 MS4A1P11836 297 aa14.41□□□□□ -0.1
ACACB-201ENST00000338432 NAP1L5Q96NT1 182 aaPredicted RBP14.4□□□□□ -0.1
ACACB-201ENST00000338432 NOP58Q9Y2X3 529 aaKnown RBP14.39□□□□□ -0.11
ACACB-201ENST00000338432 SCAF1Q9H7N4 1312 aaKnown RBP14.39□□□□□ -0.11
ACACB-201ENST00000338432 CDCA8Q53HL2 280 aa14.38□□□□□ -0.11
ACACB-201ENST00000338432 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
ACACB-201ENST00000338432 MRS2Q9HD23 443 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms