RNA–Protein interactions for RNA: ENST00000384559.1

RNU6-1235P-201, Transcript of RNA, U6 small nuclear 1235, pseudogene, humanhuman

BASIC

Gene RNU6-1235P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1235P-201ENST00000384559 AEBP2Q6ZN18 517 aaPredicted RBP10.16□□□□□ -0.78
RNU6-1235P-201ENST00000384559 CHIC1Q5VXU3 224 aa9.97□□□□□ -0.81
RNU6-1235P-201ENST00000384559 PHF23Q9BUL5 403 aaPredicted RBP8.82□□□□□ -1
RNU6-1235P-201ENST00000384559 SENP3Q9H4L4 574 aaPredicted RBP8.52□□□□□ -1.05
RNU6-1235P-201ENST00000384559 PLPPR3Q6T4P5 718 aa8.11□□□□□ -1.11
RNU6-1235P-201ENST00000384559 FOXD1Q16676 465 aa7.95□□□□□ -1.14
RNU6-1235P-201ENST00000384559 ADRA2BP18089 450 aa7.75□□□□□ -1.17
RNU6-1235P-201ENST00000384559 PPP6R1Q9UPN7 881 aa7.74□□□□□ -1.17
RNU6-1235P-201ENST00000384559 PIAS4Q8N2W9 510 aaPredicted RBP7.5□□□□□ -1.21
RNU6-1235P-201ENST00000384559 MSH5O43196 834 aa7.22□□□□□ -1.25
RNU6-1235P-201ENST00000384559 PPP4R3CPQ6ZMV5 832 aa7.19□□□□□ -1.26
RNU6-1235P-201ENST00000384559 KCNA4P22459 653 aa7.18□□□□□ -1.26
RNU6-1235P-201ENST00000384559 MAPK8IP2Q13387 824 aaPredicted RBP7.01□□□□□ -1.29
RNU6-1235P-201ENST00000384559 NCBP3Q53F19 620 aaKnown RBP6.98□□□□□ -1.29
RNU6-1235P-201ENST00000384559 SCAF1Q9H7N4 1312 aaKnown RBP6.98□□□□□ -1.29
RNU6-1235P-201ENST00000384559 NPM3O75607 178 aaKnown RBP6.95□□□□□ -1.3
RNU6-1235P-201ENST00000384559 CNKSR2Q8WXI2 1034 aa6.93□□□□□ -1.3
RNU6-1235P-201ENST00000384559 DMRT2Q9Y5R5 561 aa6.84□□□□□ -1.31
RNU6-1235P-201ENST00000384559 SLC4A1APQ9BWU0 796 aaKnown RBP6.82□□□□□ -1.32
RNU6-1235P-201ENST00000384559 EHMT2Q96KQ7 1210 aa6.8□□□□□ -1.32
RNU6-1235P-201ENST00000384559 RNF216Q9NWF9 866 aaPredicted RBP6.77□□□□□ -1.33
RNU6-1235P-201ENST00000384559 HOXD11P31277 338 aaPredicted RBP6.72□□□□□ -1.33
RNU6-1235P-201ENST00000384559 CSRNP3Q8WYN3 585 aa6.65□□□□□ -1.34
RNU6-1235P-201ENST00000384559 DNAJC5BQ9UF47 199 aa6.65□□□□□ -1.34
RNU6-1235P-201ENST00000384559 ZBTB22O15209 634 aa6.63□□□□□ -1.35
RNU6-1235P-201ENST00000384559 DCAF8L1A6NGE4 600 aa6.56□□□□□ -1.36
RNU6-1235P-201ENST00000384559 SLC4A2P04920 1241 aa6.55□□□□□ -1.36
RNU6-1235P-201ENST00000384559 FOXD4L1Q9NU39 408 aa6.54□□□□□ -1.36
RNU6-1235P-201ENST00000384559 POTEDQ86YR6 584 aa6.45□□□□□ -1.38
RNU6-1235P-201ENST00000384559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.41□□□□□ -1.38
RNU6-1235P-201ENST00000384559 MYCNP04198 464 aaPredicted RBP6.38□□□□□ -1.39
RNU6-1235P-201ENST00000384559 U3KPZ7 1027 aaPredicted RBP6.36□□□□□ -1.39
RNU6-1235P-201ENST00000384559 ATF5Q9Y2D1 282 aaPredicted RBP6.27□□□□□ -1.41
RNU6-1235P-201ENST00000384559 ATXN8OSP0DMR3 200 aa6.25□□□□□ -1.41
RNU6-1235P-201ENST00000384559 SAMD1Q6SPF0 538 aaPredicted RBP6.23□□□□□ -1.41
RNU6-1235P-201ENST00000384559 RNF39Q9H2S5 420 aa6.23□□□□□ -1.41
RNU6-1235P-201ENST00000384559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.22□□□□□ -1.41
RNU6-1235P-201ENST00000384559 HNRNPUL2Q1KMD3 747 aaKnown RBP6.22□□□□□ -1.41
RNU6-1235P-201ENST00000384559 SPINK5Q9NQ38 1064 aaPredicted RBP6.17□□□□□ -1.42
RNU6-1235P-201ENST00000384559 C1QBPQ07021 282 aaKnown RBP6.13□□□□□ -1.43
RNU6-1235P-201ENST00000384559 TRHP20396 242 aaPredicted RBP6.11□□□□□ -1.43
RNU6-1235P-201ENST00000384559 APLP2Q06481 763 aa6.11□□□□□ -1.43
RNU6-1235P-201ENST00000384559 CAPN15O75808 1086 aa6.1□□□□□ -1.43
RNU6-1235P-201ENST00000384559 ZNF219Q9P2Y4 722 aaPredicted RBP6.1□□□□□ -1.43
RNU6-1235P-201ENST00000384559 ABCB7O75027 752 aa6.04□□□□□ -1.44
RNU6-1235P-201ENST00000384559 POLA2Q14181 598 aa6.01□□□□□ -1.45
RNU6-1235P-201ENST00000384559 FKBP8Q14318 412 aa6□□□□□ -1.45
RNU6-1235P-201ENST00000384559 CACNB1Q02641 598 aaPredicted RBP5.99□□□□□ -1.45
RNU6-1235P-201ENST00000384559 MKRN4PQ13434 485 aaPredicted RBP5.99□□□□□ -1.45
RNU6-1235P-201ENST00000384559 DSG3P32926 999 aa5.98□□□□□ -1.45
RNU6-1235P-201ENST00000384559 FBLN2P98095 1184 aa5.92□□□□□ -1.46
RNU6-1235P-201ENST00000384559 SPDYE4A6NLX3 237 aa5.87□□□□□ -1.47
RNU6-1235P-201ENST00000384559 ZBTB12Q9Y330 459 aaPredicted RBP5.87□□□□□ -1.47
RNU6-1235P-201ENST00000384559 OSCARQ8IYS5 282 aa5.85□□□□□ -1.47
RNU6-1235P-201ENST00000384559 PROM2Q8N271 834 aa5.79□□□□□ -1.48
RNU6-1235P-201ENST00000384559 SPDYE2BA6NHP3 402 aa5.75□□□□□ -1.49
RNU6-1235P-201ENST00000384559 SPDYE6P0CI01 402 aa5.75□□□□□ -1.49
RNU6-1235P-201ENST00000384559 SPDYE2Q495Y8 402 aa5.75□□□□□ -1.49
RNU6-1235P-201ENST00000384559 ZNF692Q9BU19 519 aaPredicted RBP5.75□□□□□ -1.49
RNU6-1235P-201ENST00000384559 SSUH2Q9Y2M2 353 aa5.74□□□□□ -1.49
RNU6-1235P-201ENST00000384559 PABPN1Q86U42 306 aaKnown RBP eCLIP5.7□□□□□ -1.5
RNU6-1235P-201ENST00000384559 FBXO3Q9UK99 471 aa5.68□□□□□ -1.5
RNU6-1235P-201ENST00000384559 VASPP50552 380 aaPredicted RBP5.66□□□□□ -1.5
RNU6-1235P-201ENST00000384559 RTN4Q9NQC3 1192 aaKnown RBP5.66□□□□□ -1.5
RNU6-1235P-201ENST00000384559 RBM42Q9BTD8 480 aaKnown RBP5.63□□□□□ -1.51
RNU6-1235P-201ENST00000384559 AMER1Q5JTC6 1135 aaPredicted RBP5.61□□□□□ -1.51
RNU6-1235P-201ENST00000384559 IFNLR1Q8IU57 520 aaPredicted RBP5.61□□□□□ -1.51
RNU6-1235P-201ENST00000384559 AKT1S1Q96B36 256 aa5.61□□□□□ -1.51
RNU6-1235P-201ENST00000384559 REM2Q8IYK8 340 aaPredicted RBP5.59□□□□□ -1.51
RNU6-1235P-201ENST00000384559 STAG3Q9UJ98 1225 aa5.57□□□□□ -1.52
RNU6-1235P-201ENST00000384559 SPDYE1Q8NFV5 336 aaPredicted RBP5.56□□□□□ -1.52
RNU6-1235P-201ENST00000384559 CLEC11AQ9Y240 323 aa5.56□□□□□ -1.52
RNU6-1235P-201ENST00000384559 PLCD3Q8N3E9 789 aa5.55□□□□□ -1.52
RNU6-1235P-201ENST00000384559 PITPNM1O00562 1244 aa5.54□□□□□ -1.52
RNU6-1235P-201ENST00000384559 MIER1Q8N108 512 aa5.53□□□□□ -1.52
RNU6-1235P-201ENST00000384559 KLHL34Q8N239 644 aa5.52□□□□□ -1.53
RNU6-1235P-201ENST00000384559 PRR29P0C7W0 189 aa5.49□□□□□ -1.53
RNU6-1235P-201ENST00000384559 SPOCK2Q92563 424 aa5.49□□□□□ -1.53
RNU6-1235P-201ENST00000384559 CREBZFQ9NS37 354 aa5.49□□□□□ -1.53
RNU6-1235P-201ENST00000384559 PKD2Q13563 968 aa5.46□□□□□ -1.54
RNU6-1235P-201ENST00000384559 PLEKHG5O94827 1062 aa5.45□□□□□ -1.54
RNU6-1235P-201ENST00000384559 CHADLQ6NUI6 762 aa5.45□□□□□ -1.54
RNU6-1235P-201ENST00000384559 MNX1P50219 401 aaPredicted RBP5.44□□□□□ -1.54
RNU6-1235P-201ENST00000384559 NUBP1P53384 320 aa5.42□□□□□ -1.54
RNU6-1235P-201ENST00000384559 ZBTB47Q9UFB7 747 aaPredicted RBP5.42□□□□□ -1.54
RNU6-1235P-201ENST00000384559 CIZ1Q9ULV3 898 aaPredicted RBP5.41□□□□□ -1.54
RNU6-1235P-201ENST00000384559 ECM2O94769 699 aaPredicted RBP5.39□□□□□ -1.55
RNU6-1235P-201ENST00000384559 PRKAR2AP13861 404 aaKnown RBP5.39□□□□□ -1.55
RNU6-1235P-201ENST00000384559 FXR2P51116 673 aaKnown RBP eCLIP5.39□□□□□ -1.55
RNU6-1235P-201ENST00000384559 CHRDL2Q6WN34 429 aa5.39□□□□□ -1.55
RNU6-1235P-201ENST00000384559 RASEFQ8IZ41 740 aa5.38□□□□□ -1.55
RNU6-1235P-201ENST00000384559 PIP4P2Q8N4L2 257 aa5.38□□□□□ -1.55
RNU6-1235P-201ENST00000384559 RGL2O15211 777 aa5.37□□□□□ -1.55
RNU6-1235P-201ENST00000384559 DCAF8L2P0C7V8 631 aa5.37□□□□□ -1.55
RNU6-1235P-201ENST00000384559 FARP1Q9Y4F1 1045 aaPredicted RBP5.36□□□□□ -1.55
RNU6-1235P-201ENST00000384559 DCAF8Q5TAQ9 597 aa5.35□□□□□ -1.55
RNU6-1235P-201ENST00000384559 NPM1P06748 294 aaKnown RBP eCLIP5.34□□□□□ -1.55
RNU6-1235P-201ENST00000384559 GSE1Q14687 1217 aa5.33□□□□□ -1.56
RNU6-1235P-201ENST00000384559 FAM212AQ96EL1 285 aa5.33□□□□□ -1.56
RNU6-1235P-201ENST00000384559 RNF25Q96BH1 459 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 194.8 ms