RNA–Protein interactions for RNA: ENST00000317221.11

ZNF559-201, Transcript of zinc finger protein 559, humanhuman

TSL 2 BASIC

Gene ZNF559, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-201ENST00000317221 NISCHQ9Y2I1 1504 aa11.26□□□□□ -0.61
ZNF559-201ENST00000317221 HRCP23327 699 aa9.72□□□□□ -0.85
ZNF559-201ENST00000317221 CCDC180Q9P1Z9 1646 aa9.69□□□□□ -0.86
ZNF559-201ENST00000317221 DCAF8L2P0C7V8 631 aa9.63□□□□□ -0.87
ZNF559-201ENST00000317221 PELP1Q8IZL8 1130 aaKnown RBP9.53□□□□□ -0.88
ZNF559-201ENST00000317221 PPARGC1BQ86YN6 1023 aaKnown RBP9.53□□□□□ -0.88
ZNF559-201ENST00000317221 ABCC9O60706 1549 aa9.52□□□□□ -0.89
ZNF559-201ENST00000317221 PCGF6Q9BYE7 350 aa9.51□□□□□ -0.89
ZNF559-201ENST00000317221 SHROOM4Q9ULL8 1493 aa9.45□□□□□ -0.9
ZNF559-201ENST00000317221 SUPT5HO00267 1087 aaKnown RBP9.43□□□□□ -0.9
ZNF559-201ENST00000317221 ZCCHC6Q5VYS8 1495 aaKnown RBP9.43□□□□□ -0.9
ZNF559-201ENST00000317221 CHIC1Q5VXU3 224 aa9.3□□□□□ -0.92
ZNF559-201ENST00000317221 MYO15BQ96JP2 1530 aa9.3□□□□□ -0.92
ZNF559-201ENST00000317221 SCAF1Q9H7N4 1312 aaKnown RBP9.26□□□□□ -0.93
ZNF559-201ENST00000317221 MYT1Q01538 1121 aa9.2□□□□□ -0.94
ZNF559-201ENST00000317221 TRIM26Q12899 539 aaPredicted RBP9.17□□□□□ -0.94
ZNF559-201ENST00000317221 DCAF1Q9Y4B6 1507 aa9.16□□□□□ -0.94
ZNF559-201ENST00000317221 SCRIBQ14160 1630 aa9.14□□□□□ -0.95
ZNF559-201ENST00000317221 LOC105371045A0A1W2PR82 267 aa9.13□□□□□ -0.95
ZNF559-201ENST00000317221 ZEB1P37275 1124 aaPredicted RBP9.12□□□□□ -0.95
ZNF559-201ENST00000317221 NACADO15069 1562 aa9.09□□□□□ -0.95
ZNF559-201ENST00000317221 PABPN1Q86U42 306 aaKnown RBP eCLIP9.07□□□□□ -0.96
ZNF559-201ENST00000317221 RB1CC1Q8TDY2 1594 aa9.05□□□□□ -0.96
ZNF559-201ENST00000317221 ACIN1Q9UKV3 1341 aaKnown RBP9.01□□□□□ -0.97
ZNF559-201ENST00000317221 NEUROD1Q13562 356 aa8.98□□□□□ -0.97
ZNF559-201ENST00000317221 GTF3C3Q9Y5Q9 886 aa8.96□□□□□ -0.98
ZNF559-201ENST00000317221 UNC13AQ9UPW8 1703 aa8.94□□□□□ -0.98
ZNF559-201ENST00000317221 CECR2Q9BXF3 1484 aa8.9□□□□□ -0.99
ZNF559-201ENST00000317221 CENPBP07199 599 aaPredicted RBP8.88□□□□□ -0.99
ZNF559-201ENST00000317221 BICRAQ9NZM4 1560 aa8.87□□□□□ -0.99
ZNF559-201ENST00000317221 DIEXFQ68CQ4 756 aaKnown RBP8.82□□□□□ -1
ZNF559-201ENST00000317221 MROH2BQ7Z745 1585 aa8.79□□□□□ -1
ZNF559-201ENST00000317221 RSF1Q96T23 1441 aaPredicted RBP8.78□□□□□ -1
ZNF559-201ENST00000317221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.77□□□□□ -1.01
ZNF559-201ENST00000317221 CCER1Q8TC90 406 aaPredicted RBP8.76□□□□□ -1.01
ZNF559-201ENST00000317221 FAM9AQ8IZU1 332 aaPredicted RBP8.72□□□□□ -1.01
ZNF559-201ENST00000317221 TRIM41Q8WV44 630 aa8.71□□□□□ -1.01
ZNF559-201ENST00000317221 WIZO95785 1651 aa8.71□□□□□ -1.02
ZNF559-201ENST00000317221 EHMT2Q96KQ7 1210 aa8.69□□□□□ -1.02
ZNF559-201ENST00000317221 YTHDC1Q96MU7 727 aaKnown RBP8.67□□□□□ -1.02
ZNF559-201ENST00000317221 SMARCA4P51532 1647 aa8.66□□□□□ -1.02
ZNF559-201ENST00000317221 BAZ1AQ9NRL2 1556 aaPredicted RBP8.65□□□□□ -1.02
ZNF559-201ENST00000317221 TTBK1Q5TCY1 1321 aaPredicted RBP8.64□□□□□ -1.03
ZNF559-201ENST00000317221 ZNF316A6NFI3 1004 aaPredicted RBP8.62□□□□□ -1.03
ZNF559-201ENST00000317221 DNAJC5BQ9UF47 199 aa8.6□□□□□ -1.03
ZNF559-201ENST00000317221 EIF4G1Q04637 1599 aaKnown RBP8.6□□□□□ -1.03
ZNF559-201ENST00000317221 MIER1Q8N108 512 aa8.58□□□□□ -1.04
ZNF559-201ENST00000317221 BCL11AQ9H165 835 aa8.58□□□□□ -1.04
ZNF559-201ENST00000317221 ATAD2BQ9ULI0 1458 aa8.57□□□□□ -1.04
ZNF559-201ENST00000317221 ANP32EQ9BTT0 268 aa8.54□□□□□ -1.04
ZNF559-201ENST00000317221 CCDC88BA6NC98 1476 aa8.51□□□□□ -1.05
ZNF559-201ENST00000317221 CC2D2AQ9P2K1 1620 aa8.51□□□□□ -1.05
ZNF559-201ENST00000317221 BAZ1BQ9UIG0 1483 aaKnown RBP8.51□□□□□ -1.05
ZNF559-201ENST00000317221 TOP2AP11388 1531 aaKnown RBP8.5□□□□□ -1.05
ZNF559-201ENST00000317221 SUPT16HQ9Y5B9 1047 aaKnown RBP8.48□□□□□ -1.05
ZNF559-201ENST00000317221 TSHZ2Q9NRE2 1034 aa8.47□□□□□ -1.05
ZNF559-201ENST00000317221 SMARCA2P51531 1590 aa8.47□□□□□ -1.05
ZNF559-201ENST00000317221 PEG3Q9GZU2 1588 aa8.46□□□□□ -1.05
ZNF559-201ENST00000317221 CSRNP3Q8WYN3 585 aa8.45□□□□□ -1.06
ZNF559-201ENST00000317221 NCAPD3P42695 1498 aa8.44□□□□□ -1.06
ZNF559-201ENST00000317221 CLSPNQ9HAW4 1339 aa8.43□□□□□ -1.06
ZNF559-201ENST00000317221 ABCC8Q09428 1581 aa8.39□□□□□ -1.07
ZNF559-201ENST00000317221 HMGXB3Q12766 1538 aa8.37□□□□□ -1.07
ZNF559-201ENST00000317221 NESP48681 1621 aa8.36□□□□□ -1.07
ZNF559-201ENST00000317221 WRNQ14191 1432 aaPredicted RBP eCLIP8.35□□□□□ -1.07
ZNF559-201ENST00000317221 HNRNPUL2Q1KMD3 747 aaKnown RBP8.34□□□□□ -1.07
ZNF559-201ENST00000317221 RBM19Q9Y4C8 960 aaKnown RBP8.29□□□□□ -1.08
ZNF559-201ENST00000317221 BCANQ96GW7 911 aa8.29□□□□□ -1.08
ZNF559-201ENST00000317221 CEP162Q5TB80 1403 aa8.28□□□□□ -1.08
ZNF559-201ENST00000317221 CADPSQ9ULU8 1353 aa8.28□□□□□ -1.08
ZNF559-201ENST00000317221 CFTRP13569 1480 aa8.27□□□□□ -1.09
ZNF559-201ENST00000317221 PRKCSHP14314 528 aaPredicted RBP8.26□□□□□ -1.09
ZNF559-201ENST00000317221 UBTFP17480 764 aaKnown RBP8.26□□□□□ -1.09
ZNF559-201ENST00000317221 FKBP8Q14318 412 aa8.25□□□□□ -1.09
ZNF559-201ENST00000317221 TNIKQ9UKE5 1360 aa8.24□□□□□ -1.09
ZNF559-201ENST00000317221 RUSC2Q8N2Y8 1516 aa8.24□□□□□ -1.09
ZNF559-201ENST00000317221 SYNJ1O43426 1573 aa8.24□□□□□ -1.09
ZNF559-201ENST00000317221 SOGA1O94964 1423 aa8.23□□□□□ -1.09
ZNF559-201ENST00000317221 KCNH8Q96L42 1107 aa8.23□□□□□ -1.09
ZNF559-201ENST00000317221 MSH5O43196 834 aa8.21□□□□□ -1.1
ZNF559-201ENST00000317221 FANCD2Q9BXW9 1451 aa8.21□□□□□ -1.1
ZNF559-201ENST00000317221 CUX1P39880 1505 aa8.19□□□□□ -1.1
ZNF559-201ENST00000317221 ITGAEP38570 1179 aa8.18□□□□□ -1.1
ZNF559-201ENST00000317221 NEFLP07196 543 aa8.16□□□□□ -1.1
ZNF559-201ENST00000317221 APLP2Q06481 763 aa8.16□□□□□ -1.1
ZNF559-201ENST00000317221 RANGAP1P46060 587 aaPredicted RBP8.14□□□□□ -1.11
ZNF559-201ENST00000317221 KIF21AQ7Z4S6 1674 aa8.14□□□□□ -1.11
ZNF559-201ENST00000317221 RAD54L2Q9Y4B4 1467 aa8.13□□□□□ -1.11
ZNF559-201ENST00000317221 ERICH6Q7L0X2 663 aa8.13□□□□□ -1.11
ZNF559-201ENST00000317221 URB2Q14146 1524 aaKnown RBP8.13□□□□□ -1.11
ZNF559-201ENST00000317221 DHX57Q6P158 1386 aaKnown RBP8.13□□□□□ -1.11
ZNF559-201ENST00000317221 CEP164Q9UPV0 1460 aa8.13□□□□□ -1.11
ZNF559-201ENST00000317221 LAMC3Q9Y6N6 1575 aa8.12□□□□□ -1.11
ZNF559-201ENST00000317221 TOP2BQ02880 1626 aa8.12□□□□□ -1.11
ZNF559-201ENST00000317221 PDS5BQ9NTI5 1447 aa8.12□□□□□ -1.11
ZNF559-201ENST00000317221 FGD5Q6ZNL6 1462 aa8.11□□□□□ -1.11
ZNF559-201ENST00000317221 FANCIQ9NVI1 1328 aa8.11□□□□□ -1.11
ZNF559-201ENST00000317221 TOPBP1Q92547 1522 aa8.1□□□□□ -1.11
ZNF559-201ENST00000317221 ERCC6Q03468 1493 aa8.1□□□□□ -1.11
ZNF559-201ENST00000317221 MYT1LQ9UL68 1186 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms