RNA–Protein interactions for RNA: ENST00000452704.1

AL390728.3-201, humanhuman

BASIC

Gene AL390728.3, Length 270 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.3-201ENST00000452704 NISCHQ9Y2I1 1504 aa16.34■□□□□ 0.21
AL390728.3-201ENST00000452704 ABCC9O60706 1549 aa15.97■□□□□ 0.15
AL390728.3-201ENST00000452704 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
AL390728.3-201ENST00000452704 CCDC180Q9P1Z9 1646 aa15.27■□□□□ 0.03
AL390728.3-201ENST00000452704 DNAJC5Q9H3Z4 198 aa15.11■□□□□ 0.01
AL390728.3-201ENST00000452704 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
AL390728.3-201ENST00000452704 UNC13AQ9UPW8 1703 aa14.66□□□□□ -0.06
AL390728.3-201ENST00000452704 PABPN1Q86U42 306 aaKnown RBP eCLIP14.59□□□□□ -0.07
AL390728.3-201ENST00000452704 NACADO15069 1562 aa14.54□□□□□ -0.08
AL390728.3-201ENST00000452704 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
AL390728.3-201ENST00000452704 CC2D2AQ9P2K1 1620 aa14.46□□□□□ -0.09
AL390728.3-201ENST00000452704 BICRAQ9NZM4 1560 aa14.44□□□□□ -0.1
AL390728.3-201ENST00000452704 SHROOM4Q9ULL8 1493 aa14.24□□□□□ -0.13
AL390728.3-201ENST00000452704 CUX2O14529 1486 aa14.23□□□□□ -0.13
AL390728.3-201ENST00000452704 EIF4G1Q04637 1599 aaKnown RBP14.2□□□□□ -0.14
AL390728.3-201ENST00000452704 TRIM41Q8WV44 630 aa14.09□□□□□ -0.15
AL390728.3-201ENST00000452704 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
AL390728.3-201ENST00000452704 MYO15BQ96JP2 1530 aa14.01□□□□□ -0.17
AL390728.3-201ENST00000452704 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
AL390728.3-201ENST00000452704 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
AL390728.3-201ENST00000452704 THOC2Q8NI27 1593 aaKnown RBP13.63□□□□□ -0.23
AL390728.3-201ENST00000452704 AEBP2Q6ZN18 517 aaPredicted RBP13.55□□□□□ -0.24
AL390728.3-201ENST00000452704 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
AL390728.3-201ENST00000452704 BAZ1AQ9NRL2 1556 aaPredicted RBP13.49□□□□□ -0.25
AL390728.3-201ENST00000452704 NESP48681 1621 aa13.43□□□□□ -0.26
AL390728.3-201ENST00000452704 SMARCA2P51531 1590 aa13.43□□□□□ -0.26
AL390728.3-201ENST00000452704 KIF21AQ7Z4S6 1674 aa13.41□□□□□ -0.26
AL390728.3-201ENST00000452704 ZCCHC6Q5VYS8 1495 aaKnown RBP13.38□□□□□ -0.27
AL390728.3-201ENST00000452704 RIMBP3CA6NJZ7 1639 aa13.38□□□□□ -0.27
AL390728.3-201ENST00000452704 RIMBP3BA6NNM3 1639 aa13.38□□□□□ -0.27
AL390728.3-201ENST00000452704 RIMBP3Q9UFD9 1639 aa13.38□□□□□ -0.27
AL390728.3-201ENST00000452704 NCAPD3P42695 1498 aa13.34□□□□□ -0.27
AL390728.3-201ENST00000452704 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
AL390728.3-201ENST00000452704 HMGXB3Q12766 1538 aa13.28□□□□□ -0.28
AL390728.3-201ENST00000452704 OSCARQ8IYS5 282 aa13.26□□□□□ -0.29
AL390728.3-201ENST00000452704 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
AL390728.3-201ENST00000452704 ARHGEF11O15085 1522 aa13.19□□□□□ -0.3
AL390728.3-201ENST00000452704 WDR62O43379 1518 aa13.19□□□□□ -0.3
AL390728.3-201ENST00000452704 ATAD2BQ9ULI0 1458 aa13.17□□□□□ -0.3
AL390728.3-201ENST00000452704 PDS5BQ9NTI5 1447 aa13.17□□□□□ -0.3
AL390728.3-201ENST00000452704 MRC2Q9UBG0 1479 aa13.16□□□□□ -0.3
AL390728.3-201ENST00000452704 ILDR1Q86SU0 546 aaPredicted RBP13.1□□□□□ -0.31
AL390728.3-201ENST00000452704 BAZ1BQ9UIG0 1483 aaKnown RBP13.06□□□□□ -0.32
AL390728.3-201ENST00000452704 SMARCA4P51532 1647 aa13.03□□□□□ -0.32
AL390728.3-201ENST00000452704 CYB5RLQ6IPT4 315 aa12.99□□□□□ -0.33
AL390728.3-201ENST00000452704 ARAP1Q96P48 1450 aa12.97□□□□□ -0.33
AL390728.3-201ENST00000452704 CEP164Q9UPV0 1460 aa12.93□□□□□ -0.34
AL390728.3-201ENST00000452704 PEG3Q9GZU2 1588 aa12.9□□□□□ -0.34
AL390728.3-201ENST00000452704 CADPSQ9ULU8 1353 aa12.86□□□□□ -0.35
AL390728.3-201ENST00000452704 CHD1O14646 1710 aa12.86□□□□□ -0.35
AL390728.3-201ENST00000452704 RSF1Q96T23 1441 aaPredicted RBP12.81□□□□□ -0.36
AL390728.3-201ENST00000452704 FANCD2Q9BXW9 1451 aa12.78□□□□□ -0.36
AL390728.3-201ENST00000452704 URB2Q14146 1524 aaKnown RBP12.73□□□□□ -0.37
AL390728.3-201ENST00000452704 EIF4G3O43432 1585 aaKnown RBP12.73□□□□□ -0.37
AL390728.3-201ENST00000452704 ZNF608Q9ULD9 1512 aaPredicted RBP12.7□□□□□ -0.38
AL390728.3-201ENST00000452704 IFT140Q96RY7 1462 aa12.68□□□□□ -0.38
AL390728.3-201ENST00000452704 PRDM2Q13029 1718 aa12.65□□□□□ -0.38
AL390728.3-201ENST00000452704 ERCC6L2Q5T890 1561 aa12.64□□□□□ -0.39
AL390728.3-201ENST00000452704 KIF13AQ9H1H9 1805 aa12.6□□□□□ -0.39
AL390728.3-201ENST00000452704 CLASP1Q7Z460 1538 aa12.59□□□□□ -0.39
AL390728.3-201ENST00000452704 CFTRP13569 1480 aa12.56□□□□□ -0.4
AL390728.3-201ENST00000452704 MROH2BQ7Z745 1585 aa12.55□□□□□ -0.4
AL390728.3-201ENST00000452704 SYNJ1O43426 1573 aa12.53□□□□□ -0.4
AL390728.3-201ENST00000452704 LMTK3Q96Q04 1460 aa12.51□□□□□ -0.41
AL390728.3-201ENST00000452704 HECW2Q9P2P5 1572 aa12.51□□□□□ -0.41
AL390728.3-201ENST00000452704 KDM4FA0A1W2PPD8 638 aa12.5□□□□□ -0.41
AL390728.3-201ENST00000452704 FBLN2P98095 1184 aa12.5□□□□□ -0.41
AL390728.3-201ENST00000452704 GAPVD1Q14C86 1478 aa12.48□□□□□ -0.41
AL390728.3-201ENST00000452704 FBXO41Q8TF61 875 aa12.46□□□□□ -0.41
AL390728.3-201ENST00000452704 TARBP1Q13395 1621 aaKnown RBP12.45□□□□□ -0.42
AL390728.3-201ENST00000452704 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
AL390728.3-201ENST00000452704 KDM6BO15054 1643 aa12.44□□□□□ -0.42
AL390728.3-201ENST00000452704 AQRO60306 1485 aaKnown RBP eCLIP12.43□□□□□ -0.42
AL390728.3-201ENST00000452704 WIZO95785 1651 aa12.42□□□□□ -0.42
AL390728.3-201ENST00000452704 ABCC8Q09428 1581 aa12.38□□□□□ -0.43
AL390728.3-201ENST00000452704 DNMBPQ6XZF7 1577 aa12.38□□□□□ -0.43
AL390728.3-201ENST00000452704 SOCS7O14512 581 aa12.37□□□□□ -0.43
AL390728.3-201ENST00000452704 SNAPC4Q5SXM2 1469 aa12.36□□□□□ -0.43
AL390728.3-201ENST00000452704 WDR97A6NE52 1622 aa12.35□□□□□ -0.43
AL390728.3-201ENST00000452704 ADGRL1O94910 1474 aa12.33□□□□□ -0.44
AL390728.3-201ENST00000452704 MAGI1Q96QZ7 1491 aaPredicted RBP12.31□□□□□ -0.44
AL390728.3-201ENST00000452704 TSPOAP1O95153 1857 aa12.29□□□□□ -0.44
AL390728.3-201ENST00000452704 DIP2BQ9P265 1576 aa12.28□□□□□ -0.44
AL390728.3-201ENST00000452704 CHMP7Q8WUX9 453 aaPredicted RBP12.27□□□□□ -0.45
AL390728.3-201ENST00000452704 SYNJ2O15056 1496 aa12.27□□□□□ -0.45
AL390728.3-201ENST00000452704 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
AL390728.3-201ENST00000452704 ABCC10Q5T3U5 1492 aa12.25□□□□□ -0.45
AL390728.3-201ENST00000452704 PBRM1Q86U86 1689 aa12.24□□□□□ -0.45
AL390728.3-201ENST00000452704 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
AL390728.3-201ENST00000452704 ILDR2Q71H61 639 aa12.21□□□□□ -0.45
AL390728.3-201ENST00000452704 MAPKBP1O60336 1514 aa12.2□□□□□ -0.46
AL390728.3-201ENST00000452704 DISP3Q9P2K9 1392 aa12.19□□□□□ -0.46
AL390728.3-201ENST00000452704 CEP170Q5SW79 1584 aa12.19□□□□□ -0.46
AL390728.3-201ENST00000452704 FAM69CQ0P6D2 419 aa12.18□□□□□ -0.46
AL390728.3-201ENST00000452704 GRIN2BQ13224 1484 aa12.18□□□□□ -0.46
AL390728.3-201ENST00000452704 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
AL390728.3-201ENST00000452704 RAD54L2Q9Y4B4 1467 aa12.16□□□□□ -0.46
AL390728.3-201ENST00000452704 SPATA31D1Q6ZQQ2 1576 aa12.16□□□□□ -0.46
AL390728.3-201ENST00000452704 SHROOM2Q13796 1616 aa12.15□□□□□ -0.46
AL390728.3-201ENST00000452704 TOP2BQ02880 1626 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms