RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 NISCHQ9Y2I1 1504 aa9.04□□□□□ -0.96
PTPN22-207ENST00000528414 CCDC180Q9P1Z9 1646 aa9.03□□□□□ -0.96
PTPN22-207ENST00000528414 SHROOM4Q9ULL8 1493 aa8.62□□□□□ -1.03
PTPN22-207ENST00000528414 MYO15BQ96JP2 1530 aa8.57□□□□□ -1.04
PTPN22-207ENST00000528414 NACADO15069 1562 aa8.23□□□□□ -1.09
PTPN22-207ENST00000528414 DCAF1Q9Y4B6 1507 aa8.2□□□□□ -1.1
PTPN22-207ENST00000528414 UNC13AQ9UPW8 1703 aa8.18□□□□□ -1.1
PTPN22-207ENST00000528414 RB1CC1Q8TDY2 1594 aa8.17□□□□□ -1.1
PTPN22-207ENST00000528414 BICRAQ9NZM4 1560 aa7.97□□□□□ -1.13
PTPN22-207ENST00000528414 CUX2O14529 1486 aa7.75□□□□□ -1.17
PTPN22-207ENST00000528414 ABCC9O60706 1549 aa7.71□□□□□ -1.17
PTPN22-207ENST00000528414 PEG3Q9GZU2 1588 aa7.68□□□□□ -1.18
PTPN22-207ENST00000528414 SMARCA2P51531 1590 aa7.65□□□□□ -1.19
PTPN22-207ENST00000528414 EIF4G1Q04637 1599 aaKnown RBP7.6□□□□□ -1.19
PTPN22-207ENST00000528414 ZCCHC6Q5VYS8 1495 aaKnown RBP7.6□□□□□ -1.19
PTPN22-207ENST00000528414 HMGXB3Q12766 1538 aa7.6□□□□□ -1.19
PTPN22-207ENST00000528414 CC2D2AQ9P2K1 1620 aa7.6□□□□□ -1.19
PTPN22-207ENST00000528414 PRDM2Q13029 1718 aa7.55□□□□□ -1.2
PTPN22-207ENST00000528414 THOC2Q8NI27 1593 aaKnown RBP7.52□□□□□ -1.21
PTPN22-207ENST00000528414 SLC24A1O60721 1099 aa7.52□□□□□ -1.21
PTPN22-207ENST00000528414 WDR97A6NE52 1622 aa7.51□□□□□ -1.21
PTPN22-207ENST00000528414 LAMC3Q9Y6N6 1575 aa7.42□□□□□ -1.22
PTPN22-207ENST00000528414 NCAPD3P42695 1498 aa7.4□□□□□ -1.23
PTPN22-207ENST00000528414 BAZ1BQ9UIG0 1483 aaKnown RBP7.38□□□□□ -1.23
PTPN22-207ENST00000528414 WDR62O43379 1518 aa7.33□□□□□ -1.24
PTPN22-207ENST00000528414 DNAJC5Q9H3Z4 198 aa7.33□□□□□ -1.24
PTPN22-207ENST00000528414 DNAJC5BQ9UF47 199 aa7.33□□□□□ -1.24
PTPN22-207ENST00000528414 CECR2Q9BXF3 1484 aa7.32□□□□□ -1.24
PTPN22-207ENST00000528414 SMARCA4P51532 1647 aa7.22□□□□□ -1.25
PTPN22-207ENST00000528414 KIF21AQ7Z4S6 1674 aa7.15□□□□□ -1.26
PTPN22-207ENST00000528414 POTEDQ86YR6 584 aa7.14□□□□□ -1.27
PTPN22-207ENST00000528414 BAZ1AQ9NRL2 1556 aaPredicted RBP7.12□□□□□ -1.27
PTPN22-207ENST00000528414 ATAD2BQ9ULI0 1458 aa7.08□□□□□ -1.28
PTPN22-207ENST00000528414 SCRIBQ14160 1630 aa7.03□□□□□ -1.28
PTPN22-207ENST00000528414 MRC2Q9UBG0 1479 aa7.02□□□□□ -1.29
PTPN22-207ENST00000528414 CLASP1Q7Z460 1538 aa7.01□□□□□ -1.29
PTPN22-207ENST00000528414 SHROOM2Q13796 1616 aa6.99□□□□□ -1.29
PTPN22-207ENST00000528414 RSF1Q96T23 1441 aaPredicted RBP6.98□□□□□ -1.29
PTPN22-207ENST00000528414 NESP48681 1621 aa6.98□□□□□ -1.29
PTPN22-207ENST00000528414 ABCC8Q09428 1581 aa6.97□□□□□ -1.29
PTPN22-207ENST00000528414 RIMBP3CA6NJZ7 1639 aa6.96□□□□□ -1.29
PTPN22-207ENST00000528414 RIMBP3BA6NNM3 1639 aa6.96□□□□□ -1.29
PTPN22-207ENST00000528414 RIMBP3Q9UFD9 1639 aa6.96□□□□□ -1.29
PTPN22-207ENST00000528414 TARBP1Q13395 1621 aaKnown RBP6.94□□□□□ -1.3
PTPN22-207ENST00000528414 DAXXQ9UER7 740 aaPredicted RBP6.94□□□□□ -1.3
PTPN22-207ENST00000528414 PRKCSHP14314 528 aaPredicted RBP6.93□□□□□ -1.3
PTPN22-207ENST00000528414 CFTRP13569 1480 aa6.91□□□□□ -1.3
PTPN22-207ENST00000528414 PDS5BQ9NTI5 1447 aa6.9□□□□□ -1.3
PTPN22-207ENST00000528414 APLP2Q06481 763 aa6.89□□□□□ -1.31
PTPN22-207ENST00000528414 TOP2AP11388 1531 aaKnown RBP6.87□□□□□ -1.31
PTPN22-207ENST00000528414 MYT1Q01538 1121 aa6.85□□□□□ -1.31
PTPN22-207ENST00000528414 DNMBPQ6XZF7 1577 aa6.85□□□□□ -1.31
PTPN22-207ENST00000528414 TTBK1Q5TCY1 1321 aaPredicted RBP6.85□□□□□ -1.31
PTPN22-207ENST00000528414 IFT140Q96RY7 1462 aa6.85□□□□□ -1.31
PTPN22-207ENST00000528414 CHD1O14646 1710 aa6.83□□□□□ -1.32
PTPN22-207ENST00000528414 EIF4G3O43432 1585 aaKnown RBP6.81□□□□□ -1.32
PTPN22-207ENST00000528414 ABCA5Q8WWZ7 1642 aa6.8□□□□□ -1.32
PTPN22-207ENST00000528414 KIF13AQ9H1H9 1805 aa6.8□□□□□ -1.32
PTPN22-207ENST00000528414 PBRM1Q86U86 1689 aa6.8□□□□□ -1.32
PTPN22-207ENST00000528414 PELP1Q8IZL8 1130 aaKnown RBP6.79□□□□□ -1.32
PTPN22-207ENST00000528414 GLI2P10070 1586 aa6.79□□□□□ -1.32
PTPN22-207ENST00000528414 MAPKBP1O60336 1514 aa6.77□□□□□ -1.33
PTPN22-207ENST00000528414 CADPSQ9ULU8 1353 aa6.77□□□□□ -1.33
PTPN22-207ENST00000528414 CEP164Q9UPV0 1460 aa6.76□□□□□ -1.33
PTPN22-207ENST00000528414 ARHGEF11O15085 1522 aa6.76□□□□□ -1.33
PTPN22-207ENST00000528414 MAGI1Q96QZ7 1491 aaPredicted RBP6.74□□□□□ -1.33
PTPN22-207ENST00000528414 BIVM-ERCC5R4GMW8 1640 aa6.74□□□□□ -1.33
PTPN22-207ENST00000528414 ERCC6Q03468 1493 aa6.73□□□□□ -1.33
PTPN22-207ENST00000528414 URB2Q14146 1524 aaKnown RBP6.73□□□□□ -1.33
PTPN22-207ENST00000528414 SYNJ1O43426 1573 aa6.73□□□□□ -1.33
PTPN22-207ENST00000528414 PLPPR3Q6T4P5 718 aa6.72□□□□□ -1.33
PTPN22-207ENST00000528414 ERCC6L2Q5T890 1561 aa6.72□□□□□ -1.33
PTPN22-207ENST00000528414 NCBP3Q53F19 620 aaKnown RBP6.7□□□□□ -1.34
PTPN22-207ENST00000528414 ARAP1Q96P48 1450 aa6.66□□□□□ -1.34
PTPN22-207ENST00000528414 PPRC1Q5VV67 1664 aaKnown RBP6.66□□□□□ -1.34
PTPN22-207ENST00000528414 MROH2BQ7Z745 1585 aa6.65□□□□□ -1.34
PTPN22-207ENST00000528414 FANCD2Q9BXW9 1451 aa6.65□□□□□ -1.34
PTPN22-207ENST00000528414 RTN4Q9NQC3 1192 aaKnown RBP6.64□□□□□ -1.35
PTPN22-207ENST00000528414 ERICH6Q7L0X2 663 aa6.64□□□□□ -1.35
PTPN22-207ENST00000528414 KDM6BO15054 1643 aa6.64□□□□□ -1.35
PTPN22-207ENST00000528414 EHMT2Q96KQ7 1210 aa6.63□□□□□ -1.35
PTPN22-207ENST00000528414 ADAMTS12P58397 1594 aa6.63□□□□□ -1.35
PTPN22-207ENST00000528414 KIAA0586Q9BVV6 1533 aa6.63□□□□□ -1.35
PTPN22-207ENST00000528414 TOPBP1Q92547 1522 aa6.63□□□□□ -1.35
PTPN22-207ENST00000528414 MAP3K4Q9Y6R4 1608 aa6.61□□□□□ -1.35
PTPN22-207ENST00000528414 ERICH3Q5RHP9 1530 aa6.61□□□□□ -1.35
PTPN22-207ENST00000528414 NUP160Q12769 1436 aa6.59□□□□□ -1.35
PTPN22-207ENST00000528414 DIP2BQ9P265 1576 aa6.58□□□□□ -1.36
PTPN22-207ENST00000528414 WIZO95785 1651 aa6.58□□□□□ -1.36
PTPN22-207ENST00000528414 PABPN1Q86U42 306 aaKnown RBP eCLIP6.58□□□□□ -1.36
PTPN22-207ENST00000528414 ABCA10Q8WWZ4 1543 aa6.57□□□□□ -1.36
PTPN22-207ENST00000528414 UHRF1BP1LA0JNW5 1464 aa6.57□□□□□ -1.36
PTPN22-207ENST00000528414 RUSC2Q8N2Y8 1516 aa6.56□□□□□ -1.36
PTPN22-207ENST00000528414 CUL7Q14999 1698 aa6.56□□□□□ -1.36
PTPN22-207ENST00000528414 SYNJ2O15056 1496 aa6.55□□□□□ -1.36
PTPN22-207ENST00000528414 IQSEC2Q5JU85 1478 aa6.54□□□□□ -1.36
PTPN22-207ENST00000528414 CFAP43Q8NDM7 1665 aa6.52□□□□□ -1.37
PTPN22-207ENST00000528414 KDM5BQ9UGL1 1544 aa6.51□□□□□ -1.37
PTPN22-207ENST00000528414 TOP2BQ02880 1626 aa6.5□□□□□ -1.37
PTPN22-207ENST00000528414 REREQ9P2R6 1566 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms