RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 NISCHQ9Y2I1 1504 aa9.04□□□□□ -0.96
PTPN22-207ENST00000528414 CCDC180Q9P1Z9 1646 aa9.03□□□□□ -0.96
PTPN22-207ENST00000528414 SHROOM4Q9ULL8 1493 aa8.62□□□□□ -1.03
PTPN22-207ENST00000528414 MYO15BQ96JP2 1530 aa8.57□□□□□ -1.04
PTPN22-207ENST00000528414 NACADO15069 1562 aa8.23□□□□□ -1.09
PTPN22-207ENST00000528414 DCAF1Q9Y4B6 1507 aa8.2□□□□□ -1.1
PTPN22-207ENST00000528414 UNC13AQ9UPW8 1703 aa8.18□□□□□ -1.1
PTPN22-207ENST00000528414 RB1CC1Q8TDY2 1594 aa8.17□□□□□ -1.1
PTPN22-207ENST00000528414 BICRAQ9NZM4 1560 aa7.97□□□□□ -1.13
PTPN22-207ENST00000528414 CUX2O14529 1486 aa7.75□□□□□ -1.17
PTPN22-207ENST00000528414 ABCC9O60706 1549 aa7.71□□□□□ -1.17
PTPN22-207ENST00000528414 PEG3Q9GZU2 1588 aa7.68□□□□□ -1.18
PTPN22-207ENST00000528414 SMARCA2P51531 1590 aa7.65□□□□□ -1.19
PTPN22-207ENST00000528414 EIF4G1Q04637 1599 aaKnown RBP7.6□□□□□ -1.19
PTPN22-207ENST00000528414 ZCCHC6Q5VYS8 1495 aaKnown RBP7.6□□□□□ -1.19
PTPN22-207ENST00000528414 HMGXB3Q12766 1538 aa7.6□□□□□ -1.19
PTPN22-207ENST00000528414 CC2D2AQ9P2K1 1620 aa7.6□□□□□ -1.19
PTPN22-207ENST00000528414 PRDM2Q13029 1718 aa7.55□□□□□ -1.2
PTPN22-207ENST00000528414 THOC2Q8NI27 1593 aaKnown RBP7.52□□□□□ -1.21
PTPN22-207ENST00000528414 SLC24A1O60721 1099 aa7.52□□□□□ -1.21
PTPN22-207ENST00000528414 WDR97A6NE52 1622 aa7.51□□□□□ -1.21
PTPN22-207ENST00000528414 LAMC3Q9Y6N6 1575 aa7.42□□□□□ -1.22
PTPN22-207ENST00000528414 NCAPD3P42695 1498 aa7.4□□□□□ -1.23
PTPN22-207ENST00000528414 BAZ1BQ9UIG0 1483 aaKnown RBP7.38□□□□□ -1.23
PTPN22-207ENST00000528414 WDR62O43379 1518 aa7.33□□□□□ -1.24
PTPN22-207ENST00000528414 DNAJC5Q9H3Z4 198 aa7.33□□□□□ -1.24
PTPN22-207ENST00000528414 DNAJC5BQ9UF47 199 aa7.33□□□□□ -1.24
PTPN22-207ENST00000528414 CECR2Q9BXF3 1484 aa7.32□□□□□ -1.24
PTPN22-207ENST00000528414 SMARCA4P51532 1647 aa7.22□□□□□ -1.25
PTPN22-207ENST00000528414 KIF21AQ7Z4S6 1674 aa7.15□□□□□ -1.26
PTPN22-207ENST00000528414 POTEDQ86YR6 584 aa7.14□□□□□ -1.27
PTPN22-207ENST00000528414 BAZ1AQ9NRL2 1556 aaPredicted RBP7.12□□□□□ -1.27
PTPN22-207ENST00000528414 ATAD2BQ9ULI0 1458 aa7.08□□□□□ -1.28
PTPN22-207ENST00000528414 SCRIBQ14160 1630 aa7.03□□□□□ -1.28
PTPN22-207ENST00000528414 MRC2Q9UBG0 1479 aa7.02□□□□□ -1.29
PTPN22-207ENST00000528414 CLASP1Q7Z460 1538 aa7.01□□□□□ -1.29
PTPN22-207ENST00000528414 SHROOM2Q13796 1616 aa6.99□□□□□ -1.29
PTPN22-207ENST00000528414 RSF1Q96T23 1441 aaPredicted RBP6.98□□□□□ -1.29
PTPN22-207ENST00000528414 NESP48681 1621 aa6.98□□□□□ -1.29
PTPN22-207ENST00000528414 ABCC8Q09428 1581 aa6.97□□□□□ -1.29
PTPN22-207ENST00000528414 RIMBP3CA6NJZ7 1639 aa6.96□□□□□ -1.29
PTPN22-207ENST00000528414 RIMBP3BA6NNM3 1639 aa6.96□□□□□ -1.29
PTPN22-207ENST00000528414 RIMBP3Q9UFD9 1639 aa6.96□□□□□ -1.29
PTPN22-207ENST00000528414 TARBP1Q13395 1621 aaKnown RBP6.94□□□□□ -1.3
PTPN22-207ENST00000528414 DAXXQ9UER7 740 aaPredicted RBP6.94□□□□□ -1.3
PTPN22-207ENST00000528414 PRKCSHP14314 528 aaPredicted RBP6.93□□□□□ -1.3
PTPN22-207ENST00000528414 CFTRP13569 1480 aa6.91□□□□□ -1.3
PTPN22-207ENST00000528414 PDS5BQ9NTI5 1447 aa6.9□□□□□ -1.3
PTPN22-207ENST00000528414 APLP2Q06481 763 aa6.89□□□□□ -1.31
PTPN22-207ENST00000528414 TOP2AP11388 1531 aaKnown RBP6.87□□□□□ -1.31
PTPN22-207ENST00000528414 MYT1Q01538 1121 aa6.85□□□□□ -1.31
PTPN22-207ENST00000528414 DNMBPQ6XZF7 1577 aa6.85□□□□□ -1.31
PTPN22-207ENST00000528414 TTBK1Q5TCY1 1321 aaPredicted RBP6.85□□□□□ -1.31
PTPN22-207ENST00000528414 IFT140Q96RY7 1462 aa6.85□□□□□ -1.31
PTPN22-207ENST00000528414 CHD1O14646 1710 aa6.83□□□□□ -1.32
PTPN22-207ENST00000528414 EIF4G3O43432 1585 aaKnown RBP6.81□□□□□ -1.32
PTPN22-207ENST00000528414 ABCA5Q8WWZ7 1642 aa6.8□□□□□ -1.32
PTPN22-207ENST00000528414 KIF13AQ9H1H9 1805 aa6.8□□□□□ -1.32
PTPN22-207ENST00000528414 PBRM1Q86U86 1689 aa6.8□□□□□ -1.32
PTPN22-207ENST00000528414 PELP1Q8IZL8 1130 aaKnown RBP6.79□□□□□ -1.32
PTPN22-207ENST00000528414 GLI2P10070 1586 aa6.79□□□□□ -1.32
PTPN22-207ENST00000528414 MAPKBP1O60336 1514 aa6.77□□□□□ -1.33
PTPN22-207ENST00000528414 CADPSQ9ULU8 1353 aa6.77□□□□□ -1.33
PTPN22-207ENST00000528414 CEP164Q9UPV0 1460 aa6.76□□□□□ -1.33
PTPN22-207ENST00000528414 ARHGEF11O15085 1522 aa6.76□□□□□ -1.33
PTPN22-207ENST00000528414 MAGI1Q96QZ7 1491 aaPredicted RBP6.74□□□□□ -1.33
PTPN22-207ENST00000528414 BIVM-ERCC5R4GMW8 1640 aa6.74□□□□□ -1.33
PTPN22-207ENST00000528414 ERCC6Q03468 1493 aa6.73□□□□□ -1.33
PTPN22-207ENST00000528414 URB2Q14146 1524 aaKnown RBP6.73□□□□□ -1.33
PTPN22-207ENST00000528414 SYNJ1O43426 1573 aa6.73□□□□□ -1.33
PTPN22-207ENST00000528414 PLPPR3Q6T4P5 718 aa6.72□□□□□ -1.33
PTPN22-207ENST00000528414 ERCC6L2Q5T890 1561 aa6.72□□□□□ -1.33
PTPN22-207ENST00000528414 NCBP3Q53F19 620 aaKnown RBP6.7□□□□□ -1.34
PTPN22-207ENST00000528414 ARAP1Q96P48 1450 aa6.66□□□□□ -1.34
PTPN22-207ENST00000528414 PPRC1Q5VV67 1664 aaKnown RBP6.66□□□□□ -1.34
PTPN22-207ENST00000528414 MROH2BQ7Z745 1585 aa6.65□□□□□ -1.34
PTPN22-207ENST00000528414 FANCD2Q9BXW9 1451 aa6.65□□□□□ -1.34
PTPN22-207ENST00000528414 RTN4Q9NQC3 1192 aaKnown RBP6.64□□□□□ -1.35
PTPN22-207ENST00000528414 ERICH6Q7L0X2 663 aa6.64□□□□□ -1.35
PTPN22-207ENST00000528414 KDM6BO15054 1643 aa6.64□□□□□ -1.35
PTPN22-207ENST00000528414 EHMT2Q96KQ7 1210 aa6.63□□□□□ -1.35
PTPN22-207ENST00000528414 ADAMTS12P58397 1594 aa6.63□□□□□ -1.35
PTPN22-207ENST00000528414 KIAA0586Q9BVV6 1533 aa6.63□□□□□ -1.35
PTPN22-207ENST00000528414 TOPBP1Q92547 1522 aa6.63□□□□□ -1.35
PTPN22-207ENST00000528414 MAP3K4Q9Y6R4 1608 aa6.61□□□□□ -1.35
PTPN22-207ENST00000528414 ERICH3Q5RHP9 1530 aa6.61□□□□□ -1.35
PTPN22-207ENST00000528414 NUP160Q12769 1436 aa6.59□□□□□ -1.35
PTPN22-207ENST00000528414 DIP2BQ9P265 1576 aa6.58□□□□□ -1.36
PTPN22-207ENST00000528414 WIZO95785 1651 aa6.58□□□□□ -1.36
PTPN22-207ENST00000528414 PABPN1Q86U42 306 aaKnown RBP eCLIP6.58□□□□□ -1.36
PTPN22-207ENST00000528414 ABCA10Q8WWZ4 1543 aa6.57□□□□□ -1.36
PTPN22-207ENST00000528414 UHRF1BP1LA0JNW5 1464 aa6.57□□□□□ -1.36
PTPN22-207ENST00000528414 RUSC2Q8N2Y8 1516 aa6.56□□□□□ -1.36
PTPN22-207ENST00000528414 CUL7Q14999 1698 aa6.56□□□□□ -1.36
PTPN22-207ENST00000528414 SYNJ2O15056 1496 aa6.55□□□□□ -1.36
PTPN22-207ENST00000528414 IQSEC2Q5JU85 1478 aa6.54□□□□□ -1.36
PTPN22-207ENST00000528414 CFAP43Q8NDM7 1665 aa6.52□□□□□ -1.37
PTPN22-207ENST00000528414 KDM5BQ9UGL1 1544 aa6.51□□□□□ -1.37
PTPN22-207ENST00000528414 TOP2BQ02880 1626 aa6.5□□□□□ -1.37
PTPN22-207ENST00000528414 REREQ9P2R6 1566 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 208.2 ms