Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBP1Q9NZI7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBP1Q9NZI7 HTR7P1-201ENST00000538670 1336 ntBASIC19.54■□□□□ 0.72
UBP1Q9NZI7 AL158047.1-201ENST00000445918 881 ntBASIC19.54■□□□□ 0.72
UBP1Q9NZI7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBP1Q9NZI7 AC142381.4-202ENST00000563973 229 ntBASIC19.54■□□□□ 0.72
UBP1Q9NZI7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.54■□□□□ 0.72
UBP1Q9NZI7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.54■□□□□ 0.72
UBP1Q9NZI7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBP1Q9NZI7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBP1Q9NZI7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBP1Q9NZI7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 AL160286.2-201ENST00000567150 934 ntBASIC19.53■□□□□ 0.72
UBP1Q9NZI7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
UBP1Q9NZI7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBP1Q9NZI7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
UBP1Q9NZI7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
UBP1Q9NZI7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 RPS2P4-201ENST00000476944 856 ntBASIC19.51■□□□□ 0.71
UBP1Q9NZI7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UBP1Q9NZI7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms