Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 CA15P2-201ENST00000611168 834 ntBASIC9.64□□□□□ -0.87
LINC01554Q52M75 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 AL117332.1-201ENST00000622628 974 ntBASIC9.64□□□□□ -0.87
LINC01554Q52M75 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LINC01554Q52M75 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC9.64□□□□□ -0.87
LINC01554Q52M75 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 C17orf82-201ENST00000623772 1530 ntBASIC9.63□□□□□ -0.87
LINC01554Q52M75 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 AC026471.6-201ENST00000622954 1905 ntBASIC9.63□□□□□ -0.87
LINC01554Q52M75 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 EXOG-217ENST00000630638 197 ntTSL 5 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 AC012317.2-201ENST00000623305 2251 ntBASIC9.63□□□□□ -0.87
LINC01554Q52M75 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 VGF-203ENST00000611537 1622 ntTSL 5 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 BID-213ENST00000615414 2236 ntTSL 5 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01554Q52M75 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC9.63□□□□□ -0.87
LINC01554Q52M75 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms