Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 AC008764.6-201ENST00000595909 2069 ntBASIC16.54■□□□□ 0.24
CMTM3Q96MX0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMTM3Q96MX0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 SUDS3P1-201ENST00000505831 966 ntBASIC16.53■□□□□ 0.24
CMTM3Q96MX0 AC016405.3-201ENST00000607710 860 ntBASIC16.53■□□□□ 0.24
CMTM3Q96MX0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 HCG11-201ENST00000411553 5696 ntBASIC16.53■□□□□ 0.24
CMTM3Q96MX0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMTM3Q96MX0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CMTM3Q96MX0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CMTM3Q96MX0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CMTM3Q96MX0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CMTM3Q96MX0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CMTM3Q96MX0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CMTM3Q96MX0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
CMTM3Q96MX0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CMTM3Q96MX0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.52■□□□□ 0.24
CMTM3Q96MX0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CMTM3Q96MX0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.52■□□□□ 0.24
CMTM3Q96MX0 UBE2DNL-204ENST00000602536 740 ntBASIC16.52■□□□□ 0.24
CMTM3Q96MX0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CMTM3Q96MX0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CMTM3Q96MX0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.52■□□□□ 0.23
CMTM3Q96MX0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CMTM3Q96MX0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.52■□□□□ 0.23
CMTM3Q96MX0 AC004854.2-201ENST00000608450 1441 ntBASIC16.52■□□□□ 0.23
CMTM3Q96MX0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CMTM3Q96MX0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.52■□□□□ 0.23
CMTM3Q96MX0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CMTM3Q96MX0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 PRORSD1P-202ENST00000563365 2154 ntBASIC16.51■□□□□ 0.23
CMTM3Q96MX0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 RARRES2P4-201ENST00000514074 484 ntBASIC16.51■□□□□ 0.23
CMTM3Q96MX0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
CMTM3Q96MX0 AC010536.3-201ENST00000620306 533 ntBASIC16.51■□□□□ 0.23
CMTM3Q96MX0 SDHAP1-207ENST00000440850 2000 ntBASIC16.51■□□□□ 0.23
CMTM3Q96MX0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms