Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP61Q8NHU2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 RPS2P52-201ENST00000469610 820 ntBASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 UNC93B4-201ENST00000505679 747 ntBASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP61Q8NHU2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 AC008687.6-201ENST00000596318 630 ntBASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP61Q8NHU2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 AP003097.1-201ENST00000530657 1135 ntBASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 MIR4651-201ENST00000582622 73 ntBASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 AC120498.8-201ENST00000614275 531 ntBASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 TREX1-205ENST00000625293 1783 ntBASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms