Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 AC141586.3-201ENST00000562166 1838 ntBASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 AC092118.2-201ENST00000613495 667 ntBASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CRLF3Q8IUI8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 MCRIP2P1-201ENST00000394346 511 ntBASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CRLF3Q8IUI8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 AC105020.6-201ENST00000621523 1217 ntBASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 TEX21P-204ENST00000641479 1693 ntBASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.16■□□□□ 0.66
CRLF3Q8IUI8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms