Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.28e-7■■□□□ 12.5
SRSF1Q07955 RBM34-204ENST00000468751 648 ntTSL 215□□□□□ -0.018e-7■■□□□ 12.5
SRSF1Q07955 RBM34-202ENST00000429912 667 ntTSL 311.45□□□□□ -0.588e-7■■□□□ 12.5
SRSF1Q07955 RBM34-208ENST00000485019 409 ntTSL 311.45□□□□□ -0.588e-7■■□□□ 12.5
SRSF1Q07955 RBM34-209ENST00000486751 783 ntTSL 211.45□□□□□ -0.588e-7■■□□□ 12.5
SRSF1Q07955 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC11.13□□□□□ -0.638e-7■■□□□ 12.5
SRSF1Q07955 ARID4B-211ENST00000474953 3463 ntTSL 210.92□□□□□ -0.668e-7■■□□□ 12.5
SRSF1Q07955 RBM34-205ENST00000474086 882 ntTSL 210.71□□□□□ -0.698e-7■■□□□ 12.5
SRSF1Q07955 RBM25-209ENST00000531500 1039 ntTSL 310.1□□□□□ -0.798e-7■■□□□ 12.5
SRSF1Q07955 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.816e-13■■□□□ 12.5
SRSF1Q07955 RBM34-207ENST00000476261 881 ntTSL 1 (best)9.16□□□□□ -0.948e-7■■□□□ 12.5
SRSF1Q07955 RBM34-203ENST00000447801 1273 ntTSL 59.06□□□□□ -0.968e-7■■□□□ 12.5
SRSF1Q07955 RBM25-203ENST00000525321 2470 ntTSL 1 (best) BASIC9.06□□□□□ -0.968e-7■■□□□ 12.5
SRSF1Q07955 ACSM3-215ENST00000614721 3311 ntTSL 1 (best)7.11□□□□□ -1.278e-7■■□□□ 12.5
SRSF1Q07955 BSDC1-202ENST00000373520 1630 ntTSL 213.79□□□□□ -0.25e-7■■□□□ 12.5
SRSF1Q07955 HMGA2-207ENST00000537275 1508 ntTSL 1 (best)21.28■■□□□ 12e-12■■□□□ 12.5
SRSF1Q07955 HMGA2-211ENST00000545998 1584 ntTSL 1 (best)18.47■□□□□ 0.552e-12■■□□□ 12.5
SRSF1Q07955 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.442e-12■■□□□ 12.5
SRSF1Q07955 MAPK8IP3-203ENST00000561765 2374 ntTSL 1 (best)12.94□□□□□ -0.341e-8■■□□□ 12.5
SRSF1Q07955 MAPK8IP3-207ENST00000564098 4436 ntTSL 212.14□□□□□ -0.471e-8■■□□□ 12.5
SRSF1Q07955 NRDC-205ENST00000468722 754 ntTSL 316.02■□□□□ 0.161e-8■■□□□ 12.5
SRSF1Q07955 LINC01021-202ENST00000505775 946 ntTSL 1 (best) BASIC9.99□□□□□ -0.812e-12■■□□□ 12.5
SRSF1Q07955 LINC01021-203ENST00000510165 1106 ntTSL 1 (best) BASIC9.98□□□□□ -0.812e-12■■□□□ 12.5
SRSF1Q07955 LINC01021-205ENST00000514255 545 ntTSL 3 BASIC9.78□□□□□ -0.842e-12■■□□□ 12.5
SRSF1Q07955 LINC01021-206ENST00000514844 667 ntTSL 1 (best)5.51□□□□□ -1.532e-12■■□□□ 12.5
SRSF1Q07955 LINC01021-201ENST00000503107 458 ntTSL 1 (best)3.76□□□□□ -1.812e-12■■□□□ 12.5
SRSF1Q07955 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.35□□□□□ -1.872e-12■■□□□ 12.5
SRSF1Q07955 CTTN-204ENST00000393747 1315 ntTSL 517.37■□□□□ 0.377e-11■■□□□ 12.5
SRSF1Q07955 CTTN-212ENST00000527962 587 ntTSL 215.64■□□□□ 0.097e-11■■□□□ 12.5
SRSF1Q07955 CTTN-210ENST00000525852 1470 ntTSL 511.29□□□□□ -0.61e-7■■□□□ 12.5
SRSF1Q07955 CTTN-208ENST00000498223 523 ntTSL 310.29□□□□□ -0.767e-11■■□□□ 12.5
SRSF1Q07955 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.023e-17■■□□□ 12.5
SRSF1Q07955 RSRP1-222ENST00000570063 1821 ntTSL 513.99□□□□□ -0.173e-17■■□□□ 12.5
SRSF1Q07955 RSRP1-216ENST00000568212 570 ntTSL 413.83□□□□□ -0.23e-17■■□□□ 12.5
SRSF1Q07955 RSRP1-212ENST00000565733 772 ntTSL 313.2□□□□□ -0.33e-17■■□□□ 12.5
SRSF1Q07955 RSRP1-217ENST00000568254 2013 ntTSL 1 (best)13.01□□□□□ -0.333e-17■■□□□ 12.5
SRSF1Q07955 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.353e-17■■□□□ 12.5
SRSF1Q07955 RSRP1-204ENST00000473314 3034 ntTSL 210.79□□□□□ -0.683e-17■■□□□ 12.5
SRSF1Q07955 RSRP1-207ENST00000498238 2941 ntTSL 29.72□□□□□ -0.853e-17■■□□□ 12.5
SRSF1Q07955 RSRP1-213ENST00000566395 824 ntTSL 36.12□□□□□ -1.433e-17■■□□□ 12.5
SRSF1Q07955 ANO9-204ENST00000525857 466 ntTSL 413.74□□□□□ -0.218e-10■■□□□ 12.4
SRSF1Q07955 LMF2-203ENST00000504717 1233 ntTSL 524.86■■□□□ 1.574e-7■■□□□ 12.4
SRSF1Q07955 DENND5B-206ENST00000545147 566 ntTSL 221.96■■□□□ 1.114e-7■■□□□ 12.4
SRSF1Q07955 CDHR3-212ENST00000487084 834 ntTSL 320.85■□□□□ 0.934e-7■■□□□ 12.4
SRSF1Q07955 DENND5B-205ENST00000544698 643 ntTSL 320.48■□□□□ 0.874e-7■■□□□ 12.4
SRSF1Q07955 PRMT7-227ENST00000569571 959 ntTSL 520.18■□□□□ 0.824e-7■■□□□ 12.4
SRSF1Q07955 LMF2-206ENST00000514938 960 ntTSL 517.98■□□□□ 0.474e-7■■□□□ 12.4
SRSF1Q07955 CDHR3-210ENST00000474330 1603 ntTSL 517.92■□□□□ 0.464e-7■■□□□ 12.4
SRSF1Q07955 PRMT7-217ENST00000565983 588 ntTSL 415.7■□□□□ 0.14e-7■■□□□ 12.4
SRSF1Q07955 PRMT7-220ENST00000566657 584 ntTSL 215.57■□□□□ 0.084e-7■■□□□ 12.4
SRSF1Q07955 CDHR3-207ENST00000470188 2199 ntTSL 215.35■□□□□ 0.054e-7■■□□□ 12.4
SRSF1Q07955 PRMT7-205ENST00000562050 1005 ntTSL 315.24■□□□□ 0.034e-7■■□□□ 12.4
SRSF1Q07955 PRMT7-215ENST00000565745 440 ntTSL 514.38□□□□□ -0.114e-7■■□□□ 12.4
SRSF1Q07955 PRMT7-206ENST00000562381 713 ntTSL 214.14□□□□□ -0.154e-7■■□□□ 12.4
SRSF1Q07955 PRMT7-226ENST00000569047 648 ntTSL 513.79□□□□□ -0.24e-7■■□□□ 12.4
SRSF1Q07955 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.42□□□□□ -0.264e-7■■□□□ 12.4
SRSF1Q07955 PRMT7-209ENST00000563520 839 ntTSL 312.8□□□□□ -0.364e-7■■□□□ 12.4
SRSF1Q07955 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.374e-7■■□□□ 12.4
SRSF1Q07955 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.424e-7■■□□□ 12.4
SRSF1Q07955 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.4□□□□□ -0.424e-7■■□□□ 12.4
SRSF1Q07955 PRMT7-213ENST00000564441 1011 ntTSL 311.23□□□□□ -0.614e-7■■□□□ 12.4
SRSF1Q07955 PRMT7-218ENST00000566341 562 ntTSL 410.56□□□□□ -0.724e-7■■□□□ 12.4
SRSF1Q07955 PRMT7-210ENST00000563562 487 ntTSL 58.66□□□□□ -1.024e-7■■□□□ 12.4
SRSF1Q07955 GPATCH4-201ENST00000368232 1972 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.054e-7■■□□□ 12.4
SRSF1Q07955 ZMYND8-208ENST00000435836 670 ntTSL 57.88□□□□□ -1.154e-7■■□□□ 12.4
SRSF1Q07955 PRMT7-207ENST00000562456 344 ntTSL 36.95□□□□□ -1.34e-7■■□□□ 12.4
SRSF1Q07955 PRMT7-204ENST00000561806 543 ntTSL 56.47□□□□□ -1.374e-7■■□□□ 12.4
SRSF1Q07955 PRMT7-219ENST00000566430 382 ntTSL 24.01□□□□□ -1.774e-7■■□□□ 12.4
SRSF1Q07955 ZMYND8-210ENST00000446894 341 ntTSL 23.85□□□□□ -1.794e-7■■□□□ 12.4
SRSF1Q07955 ZMYND8-209ENST00000441977 175 ntTSL 30.89□□□□□ -2.274e-7■■□□□ 12.4
SRSF1Q07955 SLC3A2-222ENST00000546253 582 ntTSL 415.45■□□□□ 0.061e-16■■□□□ 12.4
SRSF1Q07955 SLC3A2-205ENST00000457660 873 ntTSL 510.63□□□□□ -0.711e-16■■□□□ 12.4
SRSF1Q07955 SLC3A2-215ENST00000539891 1300 ntTSL 1 (best)10.11□□□□□ -0.791e-16■■□□□ 12.4
SRSF1Q07955 SLC3A2-217ENST00000541425 595 ntTSL 59.92□□□□□ -0.821e-16■■□□□ 12.4
SRSF1Q07955 SLC3A2-209ENST00000537508 583 ntTSL 28.84□□□□□ -0.991e-16■■□□□ 12.4
SRSF1Q07955 SLC3A2-207ENST00000535768 597 ntTSL 58.59□□□□□ -1.031e-16■■□□□ 12.4
SRSF1Q07955 SLC3A2-223ENST00000546312 564 ntTSL 27.9□□□□□ -1.141e-16■■□□□ 12.4
SRSF1Q07955 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC11.22□□□□□ -0.612e-40■■□□□ 12.4
SRSF1Q07955 ANP32E-204ENST00000532744 621 ntTSL 314.09□□□□□ -0.154e-9■■□□□ 12.4
SRSF1Q07955 CROCCP2-201ENST00000362058 2029 ntTSL 218.36■□□□□ 0.535e-9■■□□□ 12.4
SRSF1Q07955 IKBKB-228ENST00000523517 2378 ntTSL 1 (best)13.6□□□□□ -0.236e-7■■□□□ 12.4
SRSF1Q07955 IKBKB-213ENST00000519938 2403 ntTSL 213.36□□□□□ -0.276e-7■■□□□ 12.4
SRSF1Q07955 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC12.9□□□□□ -0.346e-7■■□□□ 12.4
SRSF1Q07955 IKBKB-206ENST00000517890 2501 ntTSL 212.54□□□□□ -0.46e-7■■□□□ 12.4
SRSF1Q07955 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.636e-7■■□□□ 12.4
SRSF1Q07955 IKBKB-209ENST00000518679 2784 ntTSL 210.98□□□□□ -0.656e-7■■□□□ 12.4
SRSF1Q07955 IKBKB-227ENST00000523105 1966 ntTSL 210.89□□□□□ -0.676e-7■■□□□ 12.4
SRSF1Q07955 IKBKB-214ENST00000520201 5002 ntTSL 210.22□□□□□ -0.776e-7■■□□□ 12.4
SRSF1Q07955 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC10.17□□□□□ -0.786e-7■■□□□ 12.4
SRSF1Q07955 IKBKB-220ENST00000521661 2196 ntTSL 59.77□□□□□ -0.856e-7■■□□□ 12.4
SRSF1Q07955 IKBKB-201ENST00000342222 3952 ntTSL 29.43□□□□□ -0.96e-7■■□□□ 12.4
SRSF1Q07955 IKBKB-230ENST00000629753 4069 ntTSL 2 BASIC9.33□□□□□ -0.926e-7■■□□□ 12.4
SRSF1Q07955 IKBKB-216ENST00000520655 3777 ntTSL 29.27□□□□□ -0.936e-7■■□□□ 12.4
SRSF1Q07955 IKBKB-202ENST00000416505 4036 ntTSL 2 BASIC8.13□□□□□ -1.116e-7■■□□□ 12.4
SRSF1Q07955 HNRNPU-214ENST00000638475 2698 ntTSL 512.53□□□□□ -0.41e-7■■□□□ 12.4
SRSF1Q07955 PPP6R2-208ENST00000473283 550 ntTSL 413.65□□□□□ -0.224e-7■■□□□ 12.4
SRSF1Q07955 TOP3B-206ENST00000436282 2890 ntTSL 211.6□□□□□ -0.555e-11■■□□□ 12.4
SRSF1Q07955 TOP3B-214ENST00000457270 2956 ntTSL 511.22□□□□□ -0.615e-11■■□□□ 12.4
SRSF1Q07955 GUK1-218ENST00000469973 795 ntTSL 224.25■■□□□ 1.472e-7■■□□□ 12.4
SRSF1Q07955 UQCC1-223ENST00000498651 781 ntTSL 36.54□□□□□ -1.361e-6■■□□□ 12.4
Retrieved 100 of 14,836 protein–RNA pairs in 120.6 ms