RNA–Protein interactions for RNA: ENST00000517890.5

IKBKB-206, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-206ENST00000517890 NISCHQ9Y2I1 1504 aa34.55■■■■□ 3.12
IKBKB-206ENST00000517890 CCDC180Q9P1Z9 1646 aa29.49■■■□□ 2.31
IKBKB-206ENST00000517890 ZCCHC6Q5VYS8 1495 aaKnown RBP29.21■■■□□ 2.27
IKBKB-206ENST00000517890 SHROOM4Q9ULL8 1493 aa29.15■■■□□ 2.26
IKBKB-206ENST00000517890 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
IKBKB-206ENST00000517890 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
IKBKB-206ENST00000517890 DCAF1Q9Y4B6 1507 aa28.47■■■□□ 2.15
IKBKB-206ENST00000517890 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
IKBKB-206ENST00000517890 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
IKBKB-206ENST00000517890 ABCC9O60706 1549 aa27.52■■■□□ 2
IKBKB-206ENST00000517890 SCRIBQ14160 1630 aa27.45■■□□□ 1.98
IKBKB-206ENST00000517890 NACADO15069 1562 aa27.3■■□□□ 1.96
IKBKB-206ENST00000517890 RSF1Q96T23 1441 aaPredicted RBP27.27■■□□□ 1.96
IKBKB-206ENST00000517890 RB1CC1Q8TDY2 1594 aa27■■□□□ 1.91
IKBKB-206ENST00000517890 LOC105371045A0A1W2PR82 267 aa26.9■■□□□ 1.9
IKBKB-206ENST00000517890 CECR2Q9BXF3 1484 aa26.84■■□□□ 1.89
IKBKB-206ENST00000517890 HRCP23327 699 aa26.83■■□□□ 1.89
IKBKB-206ENST00000517890 PCGF6Q9BYE7 350 aa26.82■■□□□ 1.88
IKBKB-206ENST00000517890 MROH2BQ7Z745 1585 aa26.77■■□□□ 1.88
IKBKB-206ENST00000517890 TRIM41Q8WV44 630 aa26.76■■□□□ 1.87
IKBKB-206ENST00000517890 WIZO95785 1651 aa26.6■■□□□ 1.85
IKBKB-206ENST00000517890 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
IKBKB-206ENST00000517890 TRIM26Q12899 539 aaPredicted RBP26.47■■□□□ 1.83
IKBKB-206ENST00000517890 FAM9AQ8IZU1 332 aaPredicted RBP26.38■■□□□ 1.81
IKBKB-206ENST00000517890 SMARCA4P51532 1647 aa26.31■■□□□ 1.8
IKBKB-206ENST00000517890 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
IKBKB-206ENST00000517890 UNC13AQ9UPW8 1703 aa26.29■■□□□ 1.8
IKBKB-206ENST00000517890 EIF4G1Q04637 1599 aaKnown RBP26.25■■□□□ 1.79
IKBKB-206ENST00000517890 CCDC88BA6NC98 1476 aa26.13■■□□□ 1.77
IKBKB-206ENST00000517890 SMARCA2P51531 1590 aa26.1■■□□□ 1.77
IKBKB-206ENST00000517890 PPARGC1BQ86YN6 1023 aaKnown RBP26.1■■□□□ 1.77
IKBKB-206ENST00000517890 EHMT2Q96KQ7 1210 aa26.05■■□□□ 1.76
IKBKB-206ENST00000517890 BICRAQ9NZM4 1560 aa26.02■■□□□ 1.76
IKBKB-206ENST00000517890 PABPN1Q86U42 306 aaKnown RBP eCLIP25.96■■□□□ 1.75
IKBKB-206ENST00000517890 ZEB1P37275 1124 aaPredicted RBP25.95■■□□□ 1.74
IKBKB-206ENST00000517890 ABCC8Q09428 1581 aa25.94■■□□□ 1.74
IKBKB-206ENST00000517890 PEG3Q9GZU2 1588 aa25.89■■□□□ 1.74
IKBKB-206ENST00000517890 EEA1Q15075 1411 aa25.78■■□□□ 1.72
IKBKB-206ENST00000517890 SOGA1O94964 1423 aa25.71■■□□□ 1.71
IKBKB-206ENST00000517890 ATAD2BQ9ULI0 1458 aa25.67■■□□□ 1.7
IKBKB-206ENST00000517890 CSRNP3Q8WYN3 585 aa25.65■■□□□ 1.7
IKBKB-206ENST00000517890 TNIKQ9UKE5 1360 aa25.64■■□□□ 1.7
IKBKB-206ENST00000517890 WRNQ14191 1432 aaPredicted RBP eCLIP25.64■■□□□ 1.7
IKBKB-206ENST00000517890 CEP162Q5TB80 1403 aa25.61■■□□□ 1.69
IKBKB-206ENST00000517890 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
IKBKB-206ENST00000517890 RUSC2Q8N2Y8 1516 aa25.54■■□□□ 1.68
IKBKB-206ENST00000517890 GOLGA3Q08378 1498 aa25.5■■□□□ 1.67
IKBKB-206ENST00000517890 UBTFP17480 764 aaKnown RBP25.49■■□□□ 1.67
IKBKB-206ENST00000517890 SYNJ1O43426 1573 aa25.45■■□□□ 1.66
IKBKB-206ENST00000517890 CEP164Q9UPV0 1460 aa25.39■■□□□ 1.65
IKBKB-206ENST00000517890 KIF21BO75037 1637 aa25.34■■□□□ 1.65
IKBKB-206ENST00000517890 CCER1Q8TC90 406 aaPredicted RBP25.31■■□□□ 1.64
IKBKB-206ENST00000517890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.29■■□□□ 1.64
IKBKB-206ENST00000517890 NCAPD3P42695 1498 aa25.24■■□□□ 1.63
IKBKB-206ENST00000517890 HMGXB3Q12766 1538 aa25.24■■□□□ 1.63
IKBKB-206ENST00000517890 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
IKBKB-206ENST00000517890 TTBK1Q5TCY1 1321 aaPredicted RBP25.21■■□□□ 1.63
IKBKB-206ENST00000517890 CLIP1P30622 1438 aa25.17■■□□□ 1.62
IKBKB-206ENST00000517890 BIVM-ERCC5R4GMW8 1640 aa25.14■■□□□ 1.61
IKBKB-206ENST00000517890 RAPGEF2Q9Y4G8 1499 aa25.11■■□□□ 1.61
IKBKB-206ENST00000517890 VPS8Q8N3P4 1428 aa25.07■■□□□ 1.6
IKBKB-206ENST00000517890 APLP2Q06481 763 aa24.99■■□□□ 1.59
IKBKB-206ENST00000517890 CFTRP13569 1480 aa24.99■■□□□ 1.59
IKBKB-206ENST00000517890 ERICH3Q5RHP9 1530 aa24.99■■□□□ 1.59
IKBKB-206ENST00000517890 PRXQ9BXM0 1461 aa24.96■■□□□ 1.59
IKBKB-206ENST00000517890 CUX1P39880 1505 aa24.95■■□□□ 1.58
IKBKB-206ENST00000517890 KIF27Q86VH2 1401 aa24.9■■□□□ 1.58
IKBKB-206ENST00000517890 RANGAP1P46060 587 aaPredicted RBP24.84■■□□□ 1.57
IKBKB-206ENST00000517890 HNRNPUL2Q1KMD3 747 aaKnown RBP24.79■■□□□ 1.56
IKBKB-206ENST00000517890 PRDM2Q13029 1718 aa24.77■■□□□ 1.56
IKBKB-206ENST00000517890 DIEXFQ68CQ4 756 aaKnown RBP24.75■■□□□ 1.55
IKBKB-206ENST00000517890 ARAP1Q96P48 1450 aa24.74■■□□□ 1.55
IKBKB-206ENST00000517890 CADPSQ9ULU8 1353 aa24.73■■□□□ 1.55
IKBKB-206ENST00000517890 ZNF316A6NFI3 1004 aaPredicted RBP24.64■■□□□ 1.53
IKBKB-206ENST00000517890 CUX2O14529 1486 aa24.61■■□□□ 1.53
IKBKB-206ENST00000517890 IGF1RP08069 1367 aa24.59■■□□□ 1.53
IKBKB-206ENST00000517890 ARHGAP35Q9NRY4 1499 aa24.56■■□□□ 1.52
IKBKB-206ENST00000517890 SCAF1Q9H7N4 1312 aaKnown RBP24.55■■□□□ 1.52
IKBKB-206ENST00000517890 CC2D2AQ9P2K1 1620 aa24.55■■□□□ 1.52
IKBKB-206ENST00000517890 KANK4Q5T7N3 995 aaPredicted RBP24.54■■□□□ 1.52
IKBKB-206ENST00000517890 FGD5Q6ZNL6 1462 aa24.53■■□□□ 1.52
IKBKB-206ENST00000517890 CLSPNQ9HAW4 1339 aa24.5■■□□□ 1.51
IKBKB-206ENST00000517890 CARMIL1Q5VZK9 1371 aa24.49■■□□□ 1.51
IKBKB-206ENST00000517890 RRBP1Q9P2E9 1410 aaKnown RBP24.49■■□□□ 1.51
IKBKB-206ENST00000517890 ACIN1Q9UKV3 1341 aaKnown RBP24.47■■□□□ 1.51
IKBKB-206ENST00000517890 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.5
IKBKB-206ENST00000517890 CENPBP07199 599 aaPredicted RBP24.45■■□□□ 1.5
IKBKB-206ENST00000517890 MAP3K1Q13233 1512 aa24.38■■□□□ 1.49
IKBKB-206ENST00000517890 DHX57Q6P158 1386 aaKnown RBP24.38■■□□□ 1.49
IKBKB-206ENST00000517890 CCNB3Q8WWL7 1395 aa24.38■■□□□ 1.49
IKBKB-206ENST00000517890 NEUROD1Q13562 356 aa24.37■■□□□ 1.49
IKBKB-206ENST00000517890 DNMBPQ6XZF7 1577 aa24.35■■□□□ 1.49
IKBKB-206ENST00000517890 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
IKBKB-206ENST00000517890 TIAM1Q13009 1591 aa24.3■■□□□ 1.48
IKBKB-206ENST00000517890 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
IKBKB-206ENST00000517890 TOPBP1Q92547 1522 aa24.28■■□□□ 1.48
IKBKB-206ENST00000517890 POLA1P09884 1462 aaPredicted RBP24.26■■□□□ 1.47
IKBKB-206ENST00000517890 RAD54L2Q9Y4B4 1467 aa24.24■■□□□ 1.47
IKBKB-206ENST00000517890 LRRC9Q6ZRR7 1453 aa24.22■■□□□ 1.47
IKBKB-206ENST00000517890 NESP48681 1621 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms