RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 NISCHQ9Y2I1 1504 aa37.01■■■■□ 3.52
IKBKB-228ENST00000523517 SHROOM4Q9ULL8 1493 aa31.5■■■□□ 2.63
IKBKB-228ENST00000523517 CCDC180Q9P1Z9 1646 aa31.41■■■□□ 2.62
IKBKB-228ENST00000523517 ZCCHC6Q5VYS8 1495 aaKnown RBP31.33■■■□□ 2.61
IKBKB-228ENST00000523517 SUPT5HO00267 1087 aaKnown RBP30.94■■■□□ 2.54
IKBKB-228ENST00000523517 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
IKBKB-228ENST00000523517 DCAF1Q9Y4B6 1507 aa30.42■■■□□ 2.46
IKBKB-228ENST00000523517 CHIC1Q5VXU3 224 aa30.18■■■□□ 2.42
IKBKB-228ENST00000523517 MYO15BQ96JP2 1530 aa30.01■■■□□ 2.39
IKBKB-228ENST00000523517 ABCC9O60706 1549 aa29.54■■■□□ 2.32
IKBKB-228ENST00000523517 SCRIBQ14160 1630 aa29.4■■■□□ 2.3
IKBKB-228ENST00000523517 HRCP23327 699 aa29.35■■■□□ 2.29
IKBKB-228ENST00000523517 RSF1Q96T23 1441 aaPredicted RBP29.32■■■□□ 2.28
IKBKB-228ENST00000523517 PCGF6Q9BYE7 350 aa29.24■■■□□ 2.27
IKBKB-228ENST00000523517 LOC105371045A0A1W2PR82 267 aa29.23■■■□□ 2.27
IKBKB-228ENST00000523517 NACADO15069 1562 aa29.07■■■□□ 2.24
IKBKB-228ENST00000523517 RB1CC1Q8TDY2 1594 aa28.99■■■□□ 2.23
IKBKB-228ENST00000523517 TRIM41Q8WV44 630 aa28.87■■■□□ 2.21
IKBKB-228ENST00000523517 CECR2Q9BXF3 1484 aa28.83■■■□□ 2.21
IKBKB-228ENST00000523517 TRIM26Q12899 539 aaPredicted RBP28.75■■■□□ 2.19
IKBKB-228ENST00000523517 MROH2BQ7Z745 1585 aa28.74■■■□□ 2.19
IKBKB-228ENST00000523517 PPARGC1BQ86YN6 1023 aaKnown RBP28.64■■■□□ 2.17
IKBKB-228ENST00000523517 FAM9AQ8IZU1 332 aaPredicted RBP28.56■■■□□ 2.16
IKBKB-228ENST00000523517 WIZO95785 1651 aa28.54■■■□□ 2.16
IKBKB-228ENST00000523517 BAZ1AQ9NRL2 1556 aaPredicted RBP28.43■■■□□ 2.14
IKBKB-228ENST00000523517 EHMT2Q96KQ7 1210 aa28.25■■■□□ 2.11
IKBKB-228ENST00000523517 EIF4G1Q04637 1599 aaKnown RBP28.24■■■□□ 2.11
IKBKB-228ENST00000523517 ZEB1P37275 1124 aaPredicted RBP28.18■■■□□ 2.1
IKBKB-228ENST00000523517 TOP2AP11388 1531 aaKnown RBP28.17■■■□□ 2.1
IKBKB-228ENST00000523517 SMARCA4P51532 1647 aa28.14■■■□□ 2.09
IKBKB-228ENST00000523517 CCDC88BA6NC98 1476 aa28.06■■■□□ 2.08
IKBKB-228ENST00000523517 SMARCA2P51531 1590 aa28■■■□□ 2.07
IKBKB-228ENST00000523517 UNC13AQ9UPW8 1703 aa27.99■■■□□ 2.07
IKBKB-228ENST00000523517 ABCC8Q09428 1581 aa27.93■■■□□ 2.06
IKBKB-228ENST00000523517 PABPN1Q86U42 306 aaKnown RBP eCLIP27.77■■■□□ 2.04
IKBKB-228ENST00000523517 BICRAQ9NZM4 1560 aa27.76■■■□□ 2.03
IKBKB-228ENST00000523517 SOGA1O94964 1423 aa27.73■■■□□ 2.03
IKBKB-228ENST00000523517 WRNQ14191 1432 aaPredicted RBP eCLIP27.69■■■□□ 2.02
IKBKB-228ENST00000523517 EEA1Q15075 1411 aa27.69■■■□□ 2.02
IKBKB-228ENST00000523517 CEP162Q5TB80 1403 aa27.65■■■□□ 2.02
IKBKB-228ENST00000523517 TNIKQ9UKE5 1360 aa27.65■■■□□ 2.02
IKBKB-228ENST00000523517 PEG3Q9GZU2 1588 aa27.64■■■□□ 2.02
IKBKB-228ENST00000523517 CSRNP3Q8WYN3 585 aa27.63■■■□□ 2.01
IKBKB-228ENST00000523517 RUSC2Q8N2Y8 1516 aa27.57■■■□□ 2
IKBKB-228ENST00000523517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.52■■■□□ 2
IKBKB-228ENST00000523517 CCER1Q8TC90 406 aaPredicted RBP27.48■■□□□ 1.99
IKBKB-228ENST00000523517 UBTFP17480 764 aaKnown RBP27.48■■□□□ 1.99
IKBKB-228ENST00000523517 GOLGA3Q08378 1498 aa27.45■■□□□ 1.99
IKBKB-228ENST00000523517 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
IKBKB-228ENST00000523517 TTBK1Q5TCY1 1321 aaPredicted RBP27.37■■□□□ 1.97
IKBKB-228ENST00000523517 BAZ1BQ9UIG0 1483 aaKnown RBP27.35■■□□□ 1.97
IKBKB-228ENST00000523517 SYNJ1O43426 1573 aa27.35■■□□□ 1.97
IKBKB-228ENST00000523517 CEP164Q9UPV0 1460 aa27.3■■□□□ 1.96
IKBKB-228ENST00000523517 KIF21BO75037 1637 aa27.24■■□□□ 1.95
IKBKB-228ENST00000523517 CLIP1P30622 1438 aa27.13■■□□□ 1.93
IKBKB-228ENST00000523517 RAPGEF2Q9Y4G8 1499 aa27.05■■□□□ 1.92
IKBKB-228ENST00000523517 VPS8Q8N3P4 1428 aa27.04■■□□□ 1.92
IKBKB-228ENST00000523517 TOP2BQ02880 1626 aa27.03■■□□□ 1.92
IKBKB-228ENST00000523517 SCAF1Q9H7N4 1312 aaKnown RBP27.02■■□□□ 1.92
IKBKB-228ENST00000523517 DIEXFQ68CQ4 756 aaKnown RBP26.98■■□□□ 1.91
IKBKB-228ENST00000523517 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
IKBKB-228ENST00000523517 BIVM-ERCC5R4GMW8 1640 aa26.92■■□□□ 1.9
IKBKB-228ENST00000523517 APLP2Q06481 763 aa26.9■■□□□ 1.9
IKBKB-228ENST00000523517 HMGXB3Q12766 1538 aa26.9■■□□□ 1.9
IKBKB-228ENST00000523517 HNRNPUL2Q1KMD3 747 aaKnown RBP26.88■■□□□ 1.89
IKBKB-228ENST00000523517 PRXQ9BXM0 1461 aa26.84■■□□□ 1.89
IKBKB-228ENST00000523517 RANGAP1P46060 587 aaPredicted RBP26.83■■□□□ 1.89
IKBKB-228ENST00000523517 ERICH3Q5RHP9 1530 aa26.82■■□□□ 1.88
IKBKB-228ENST00000523517 ACIN1Q9UKV3 1341 aaKnown RBP26.8■■□□□ 1.88
IKBKB-228ENST00000523517 ZNF316A6NFI3 1004 aaPredicted RBP26.8■■□□□ 1.88
IKBKB-228ENST00000523517 CUX1P39880 1505 aa26.76■■□□□ 1.88
IKBKB-228ENST00000523517 NEUROD1Q13562 356 aa26.72■■□□□ 1.87
IKBKB-228ENST00000523517 CFTRP13569 1480 aa26.72■■□□□ 1.87
IKBKB-228ENST00000523517 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
IKBKB-228ENST00000523517 ARAP1Q96P48 1450 aa26.68■■□□□ 1.86
IKBKB-228ENST00000523517 CENPBP07199 599 aaPredicted RBP26.65■■□□□ 1.86
IKBKB-228ENST00000523517 PELP1Q8IZL8 1130 aaKnown RBP26.58■■□□□ 1.85
IKBKB-228ENST00000523517 KANK4Q5T7N3 995 aaPredicted RBP26.54■■□□□ 1.84
IKBKB-228ENST00000523517 CLSPNQ9HAW4 1339 aa26.46■■□□□ 1.83
IKBKB-228ENST00000523517 GTF3C3Q9Y5Q9 886 aa26.45■■□□□ 1.82
IKBKB-228ENST00000523517 ARHGAP35Q9NRY4 1499 aa26.45■■□□□ 1.82
IKBKB-228ENST00000523517 RRBP1Q9P2E9 1410 aaKnown RBP26.43■■□□□ 1.82
IKBKB-228ENST00000523517 DHX57Q6P158 1386 aaKnown RBP26.42■■□□□ 1.82
IKBKB-228ENST00000523517 IGF1RP08069 1367 aa26.41■■□□□ 1.82
IKBKB-228ENST00000523517 CADPSQ9ULU8 1353 aa26.41■■□□□ 1.82
IKBKB-228ENST00000523517 CUX2O14529 1486 aa26.4■■□□□ 1.82
IKBKB-228ENST00000523517 MIER1Q8N108 512 aa26.39■■□□□ 1.81
IKBKB-228ENST00000523517 PRDM2Q13029 1718 aa26.36■■□□□ 1.81
IKBKB-228ENST00000523517 CCNB3Q8WWL7 1395 aa26.3■■□□□ 1.8
IKBKB-228ENST00000523517 FGD5Q6ZNL6 1462 aa26.28■■□□□ 1.8
IKBKB-228ENST00000523517 CARMIL1Q5VZK9 1371 aa26.28■■□□□ 1.8
IKBKB-228ENST00000523517 YTHDC1Q96MU7 727 aaKnown RBP26.27■■□□□ 1.8
IKBKB-228ENST00000523517 MAP3K1Q13233 1512 aa26.2■■□□□ 1.78
IKBKB-228ENST00000523517 TIAM1Q13009 1591 aa26.15■■□□□ 1.78
IKBKB-228ENST00000523517 FANCD2Q9BXW9 1451 aa26.13■■□□□ 1.77
IKBKB-228ENST00000523517 ITGAEP38570 1179 aa26.12■■□□□ 1.77
IKBKB-228ENST00000523517 CC2D2AQ9P2K1 1620 aa26.12■■□□□ 1.77
IKBKB-228ENST00000523517 LRRC9Q6ZRR7 1453 aa26.08■■□□□ 1.77
IKBKB-228ENST00000523517 FHAD1B1AJZ9 1412 aa26.07■■□□□ 1.76
IKBKB-228ENST00000523517 RAB3GAP2Q9H2M9 1393 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms