RNA–Protein interactions for RNA: ENST00000473314.6

RSRP1-204, Transcript of arginine and serine rich protein 1, humanhuman

TSL 2

Gene RSRP1, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSRP1-204ENST00000473314 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
RSRP1-204ENST00000473314 CCDC180Q9P1Z9 1646 aa25.08■■□□□ 1.61
RSRP1-204ENST00000473314 SHROOM4Q9ULL8 1493 aa24.85■■□□□ 1.57
RSRP1-204ENST00000473314 DCAF8L2P0C7V8 631 aa24.81■■□□□ 1.56
RSRP1-204ENST00000473314 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
RSRP1-204ENST00000473314 SUPT5HO00267 1087 aaKnown RBP24.19■■□□□ 1.46
RSRP1-204ENST00000473314 DCAF1Q9Y4B6 1507 aa23.97■■□□□ 1.43
RSRP1-204ENST00000473314 ABCC9O60706 1549 aa23.85■■□□□ 1.41
RSRP1-204ENST00000473314 SCRIBQ14160 1630 aa23.56■■□□□ 1.36
RSRP1-204ENST00000473314 MYO15BQ96JP2 1530 aa23.44■■□□□ 1.34
RSRP1-204ENST00000473314 NACADO15069 1562 aa23.37■■□□□ 1.33
RSRP1-204ENST00000473314 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
RSRP1-204ENST00000473314 HRCP23327 699 aa23.26■■□□□ 1.31
RSRP1-204ENST00000473314 PCGF6Q9BYE7 350 aa23.18■■□□□ 1.3
RSRP1-204ENST00000473314 RB1CC1Q8TDY2 1594 aa23.14■■□□□ 1.29
RSRP1-204ENST00000473314 PELP1Q8IZL8 1130 aaKnown RBP23.04■■□□□ 1.28
RSRP1-204ENST00000473314 RSF1Q96T23 1441 aaPredicted RBP23.02■■□□□ 1.28
RSRP1-204ENST00000473314 PPARGC1BQ86YN6 1023 aaKnown RBP22.97■■□□□ 1.27
RSRP1-204ENST00000473314 CECR2Q9BXF3 1484 aa22.91■■□□□ 1.26
RSRP1-204ENST00000473314 LOC105371045A0A1W2PR82 267 aa22.8■■□□□ 1.24
RSRP1-204ENST00000473314 MROH2BQ7Z745 1585 aa22.77■■□□□ 1.23
RSRP1-204ENST00000473314 PABPN1Q86U42 306 aaKnown RBP eCLIP22.76■■□□□ 1.234e-9■■■□□ 17.7
RSRP1-204ENST00000473314 UNC13AQ9UPW8 1703 aa22.63■■□□□ 1.21
RSRP1-204ENST00000473314 WIZO95785 1651 aa22.62■■□□□ 1.21
RSRP1-204ENST00000473314 BAZ1AQ9NRL2 1556 aaPredicted RBP22.58■■□□□ 1.2
RSRP1-204ENST00000473314 TRIM41Q8WV44 630 aa22.55■■□□□ 1.2
RSRP1-204ENST00000473314 TRIM26Q12899 539 aaPredicted RBP22.47■■□□□ 1.19
RSRP1-204ENST00000473314 FAM9AQ8IZU1 332 aaPredicted RBP22.41■■□□□ 1.18
RSRP1-204ENST00000473314 SMARCA4P51532 1647 aa22.41■■□□□ 1.18
RSRP1-204ENST00000473314 BICRAQ9NZM4 1560 aa22.4■■□□□ 1.18
RSRP1-204ENST00000473314 SCAF1Q9H7N4 1312 aaKnown RBP22.36■■□□□ 1.17
RSRP1-204ENST00000473314 EHMT2Q96KQ7 1210 aa22.3■■□□□ 1.16
RSRP1-204ENST00000473314 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
RSRP1-204ENST00000473314 MYT1Q01538 1121 aa22.23■■□□□ 1.15
RSRP1-204ENST00000473314 CCDC88BA6NC98 1476 aa22.18■■□□□ 1.14
RSRP1-204ENST00000473314 SMARCA2P51531 1590 aa22.09■■□□□ 1.13
RSRP1-204ENST00000473314 ZEB1P37275 1124 aaPredicted RBP22.09■■□□□ 1.13
RSRP1-204ENST00000473314 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
RSRP1-204ENST00000473314 ABCC8Q09428 1581 aa21.98■■□□□ 1.11
RSRP1-204ENST00000473314 BAZ1BQ9UIG0 1483 aaKnown RBP21.97■■□□□ 1.11
RSRP1-204ENST00000473314 EIF4G1Q04637 1599 aaKnown RBP21.94■■□□□ 1.1
RSRP1-204ENST00000473314 PEG3Q9GZU2 1588 aa21.92■■□□□ 1.1
RSRP1-204ENST00000473314 WRNQ14191 1432 aaPredicted RBP eCLIP21.71■■□□□ 1.07
RSRP1-204ENST00000473314 SOGA1O94964 1423 aa21.7■■□□□ 1.06
RSRP1-204ENST00000473314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.66■■□□□ 1.06
RSRP1-204ENST00000473314 CCER1Q8TC90 406 aaPredicted RBP21.63■■□□□ 1.05
RSRP1-204ENST00000473314 NCAPD3P42695 1498 aa21.62■■□□□ 1.05
RSRP1-204ENST00000473314 UBTFP17480 764 aaKnown RBP21.61■■□□□ 1.05
RSRP1-204ENST00000473314 CSRNP3Q8WYN3 585 aa21.61■■□□□ 1.05
RSRP1-204ENST00000473314 ACIN1Q9UKV3 1341 aaKnown RBP21.6■■□□□ 1.05
RSRP1-204ENST00000473314 NEUROD1Q13562 356 aa21.59■■□□□ 1.05
RSRP1-204ENST00000473314 RUSC2Q8N2Y8 1516 aa21.58■■□□□ 1.05
RSRP1-204ENST00000473314 TTBK1Q5TCY1 1321 aaPredicted RBP21.57■■□□□ 1.04
RSRP1-204ENST00000473314 HMGXB3Q12766 1538 aa21.56■■□□□ 1.04
RSRP1-204ENST00000473314 GTF3C3Q9Y5Q9 886 aa21.54■■□□□ 1.04
RSRP1-204ENST00000473314 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
RSRP1-204ENST00000473314 EEA1Q15075 1411 aa21.5■■□□□ 1.03
RSRP1-204ENST00000473314 RANGAP1P46060 587 aaPredicted RBP21.39■■□□□ 1.01
RSRP1-204ENST00000473314 CEP162Q5TB80 1403 aa21.39■■□□□ 1.01
RSRP1-204ENST00000473314 CC2D2AQ9P2K1 1620 aa21.37■■□□□ 1.01
RSRP1-204ENST00000473314 TNIKQ9UKE5 1360 aa21.36■■□□□ 1.01
RSRP1-204ENST00000473314 GOLGA3Q08378 1498 aa21.36■■□□□ 1.01
RSRP1-204ENST00000473314 DIEXFQ68CQ4 756 aaKnown RBP21.35■■□□□ 1.01
RSRP1-204ENST00000473314 CFTRP13569 1480 aa21.32■■□□□ 1
RSRP1-204ENST00000473314 TOP2BQ02880 1626 aa21.3■■□□□ 1
RSRP1-204ENST00000473314 CEP164Q9UPV0 1460 aa21.28■■□□□ 1
RSRP1-204ENST00000473314 CENPBP07199 599 aaPredicted RBP21.26■□□□□ 0.99
RSRP1-204ENST00000473314 CADPSQ9ULU8 1353 aa21.25■□□□□ 0.99
RSRP1-204ENST00000473314 CUX1P39880 1505 aa21.22■□□□□ 0.99
RSRP1-204ENST00000473314 BIVM-ERCC5R4GMW8 1640 aa21.19■□□□□ 0.98
RSRP1-204ENST00000473314 RAPGEF2Q9Y4G8 1499 aa21.18■□□□□ 0.98
RSRP1-204ENST00000473314 KIF21BO75037 1637 aa21.15■□□□□ 0.98
RSRP1-204ENST00000473314 CLIP1P30622 1438 aa21.13■□□□□ 0.97
RSRP1-204ENST00000473314 KIF27Q86VH2 1401 aa21.12■□□□□ 0.97
RSRP1-204ENST00000473314 APLP2Q06481 763 aa21.08■□□□□ 0.96
RSRP1-204ENST00000473314 YTHDC1Q96MU7 727 aaKnown RBP21.08■□□□□ 0.96
RSRP1-204ENST00000473314 FANCD2Q9BXW9 1451 aa21.04■□□□□ 0.96
RSRP1-204ENST00000473314 NESP48681 1621 aa21.04■□□□□ 0.96
RSRP1-204ENST00000473314 PRDM2Q13029 1718 aa21.03■□□□□ 0.96
RSRP1-204ENST00000473314 CUX2O14529 1486 aa21.02■□□□□ 0.96
RSRP1-204ENST00000473314 ZNF316A6NFI3 1004 aaPredicted RBP21.02■□□□□ 0.96
RSRP1-204ENST00000473314 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
RSRP1-204ENST00000473314 BCL11AQ9H165 835 aa21■□□□□ 0.95
RSRP1-204ENST00000473314 HNRNPUL2Q1KMD3 747 aaKnown RBP20.99■□□□□ 0.95
RSRP1-204ENST00000473314 FGD5Q6ZNL6 1462 aa20.98■□□□□ 0.95
RSRP1-204ENST00000473314 PRXQ9BXM0 1461 aa20.97■□□□□ 0.95
RSRP1-204ENST00000473314 VPS8Q8N3P4 1428 aa20.92■□□□□ 0.94
RSRP1-204ENST00000473314 ERICH3Q5RHP9 1530 aa20.91■□□□□ 0.94
RSRP1-204ENST00000473314 IGF1RP08069 1367 aa20.87■□□□□ 0.93
RSRP1-204ENST00000473314 RAD54L2Q9Y4B4 1467 aa20.85■□□□□ 0.93
RSRP1-204ENST00000473314 MIER1Q8N108 512 aa20.84■□□□□ 0.93
RSRP1-204ENST00000473314 CARMIL1Q5VZK9 1371 aa20.84■□□□□ 0.93
RSRP1-204ENST00000473314 TOPBP1Q92547 1522 aa20.82■□□□□ 0.92
RSRP1-204ENST00000473314 DNMBPQ6XZF7 1577 aa20.8■□□□□ 0.92
RSRP1-204ENST00000473314 LAMC3Q9Y6N6 1575 aa20.79■□□□□ 0.92
RSRP1-204ENST00000473314 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
RSRP1-204ENST00000473314 POLA1P09884 1462 aaPredicted RBP20.77■□□□□ 0.92
RSRP1-204ENST00000473314 ARAP1Q96P48 1450 aa20.74■□□□□ 0.91
RSRP1-204ENST00000473314 P3H3Q8IVL6 736 aa20.73■□□□□ 0.91
RSRP1-204ENST00000473314 ATP1B4Q9UN42 357 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms