RNA–Protein interactions for RNA: ENST00000342222.6

IKBKB-201, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 3,952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-201ENST00000342222 NISCHQ9Y2I1 1504 aa23.19■■□□□ 1.3
IKBKB-201ENST00000342222 SHROOM4Q9ULL8 1493 aa21.02■□□□□ 0.95
IKBKB-201ENST00000342222 SUPT5HO00267 1087 aaKnown RBP20.9■□□□□ 0.94
IKBKB-201ENST00000342222 DCAF8L2P0C7V8 631 aa20.8■□□□□ 0.92
IKBKB-201ENST00000342222 PCGF6Q9BYE7 350 aa19.93■□□□□ 0.78
IKBKB-201ENST00000342222 CHIC1Q5VXU3 224 aa19.8■□□□□ 0.76
IKBKB-201ENST00000342222 HRCP23327 699 aa19.64■□□□□ 0.73
IKBKB-201ENST00000342222 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
IKBKB-201ENST00000342222 LOC105371045A0A1W2PR82 267 aa19.53■□□□□ 0.72
IKBKB-201ENST00000342222 ZCCHC6Q5VYS8 1495 aaKnown RBP19.52■□□□□ 0.71
IKBKB-201ENST00000342222 FAM9AQ8IZU1 332 aaPredicted RBP19.47■□□□□ 0.71
IKBKB-201ENST00000342222 PPARGC1BQ86YN6 1023 aaKnown RBP19.46■□□□□ 0.71
IKBKB-201ENST00000342222 MYO15BQ96JP2 1530 aa19.39■□□□□ 0.69
IKBKB-201ENST00000342222 TRIM41Q8WV44 630 aa19.27■□□□□ 0.67
IKBKB-201ENST00000342222 CCDC180Q9P1Z9 1646 aa19.19■□□□□ 0.66
IKBKB-201ENST00000342222 TRIM26Q12899 539 aaPredicted RBP19.17■□□□□ 0.66
IKBKB-201ENST00000342222 TTBK1Q5TCY1 1321 aaPredicted RBP19■□□□□ 0.63
IKBKB-201ENST00000342222 ZEB1P37275 1124 aaPredicted RBP18.94■□□□□ 0.62
IKBKB-201ENST00000342222 DCAF1Q9Y4B6 1507 aa18.88■□□□□ 0.61
IKBKB-201ENST00000342222 CCER1Q8TC90 406 aaPredicted RBP18.78■□□□□ 0.6
IKBKB-201ENST00000342222 SCRIBQ14160 1630 aa18.71■□□□□ 0.59
IKBKB-201ENST00000342222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.64■□□□□ 0.57
IKBKB-201ENST00000342222 ABCC9O60706 1549 aa18.62■□□□□ 0.57
IKBKB-201ENST00000342222 RSF1Q96T23 1441 aaPredicted RBP18.6■□□□□ 0.57
IKBKB-201ENST00000342222 UBTFP17480 764 aaKnown RBP18.55■□□□□ 0.56
IKBKB-201ENST00000342222 RANGAP1P46060 587 aaPredicted RBP18.5■□□□□ 0.55
IKBKB-201ENST00000342222 CENPBP07199 599 aaPredicted RBP18.39■□□□□ 0.53
IKBKB-201ENST00000342222 APLP2Q06481 763 aa18.38■□□□□ 0.53
IKBKB-201ENST00000342222 RB1CC1Q8TDY2 1594 aa18.37■□□□□ 0.53
IKBKB-201ENST00000342222 PELP1Q8IZL8 1130 aaKnown RBP18.34■□□□□ 0.53
IKBKB-201ENST00000342222 YTHDC1Q96MU7 727 aaKnown RBP18.34■□□□□ 0.53
IKBKB-201ENST00000342222 DIEXFQ68CQ4 756 aaKnown RBP18.3■□□□□ 0.52
IKBKB-201ENST00000342222 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
IKBKB-201ENST00000342222 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
IKBKB-201ENST00000342222 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
IKBKB-201ENST00000342222 PABPN1Q86U42 306 aaKnown RBP eCLIP18.19■□□□□ 0.5
IKBKB-201ENST00000342222 MROH2BQ7Z745 1585 aa18.14■□□□□ 0.49
IKBKB-201ENST00000342222 GTF3C3Q9Y5Q9 886 aa18.13■□□□□ 0.49
IKBKB-201ENST00000342222 ACIN1Q9UKV3 1341 aaKnown RBP18.11■□□□□ 0.49
IKBKB-201ENST00000342222 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
IKBKB-201ENST00000342222 NEUROD1Q13562 356 aa18.08■□□□□ 0.49
IKBKB-201ENST00000342222 NACADO15069 1562 aa18.01■□□□□ 0.47
IKBKB-201ENST00000342222 WIZO95785 1651 aa18■□□□□ 0.47
IKBKB-201ENST00000342222 ZNF316A6NFI3 1004 aaPredicted RBP17.98■□□□□ 0.47
IKBKB-201ENST00000342222 CEP162Q5TB80 1403 aa17.96■□□□□ 0.47
IKBKB-201ENST00000342222 ITGAEP38570 1179 aa17.92■□□□□ 0.46
IKBKB-201ENST00000342222 ABCC8Q09428 1581 aa17.91■□□□□ 0.46
IKBKB-201ENST00000342222 SOGA1O94964 1423 aa17.89■□□□□ 0.45
IKBKB-201ENST00000342222 CCDC88BA6NC98 1476 aa17.88■□□□□ 0.45
IKBKB-201ENST00000342222 BAZ1AQ9NRL2 1556 aaPredicted RBP17.86■□□□□ 0.45
IKBKB-201ENST00000342222 ATP1B4Q9UN42 357 aaPredicted RBP17.82■□□□□ 0.44
IKBKB-201ENST00000342222 TNIKQ9UKE5 1360 aa17.8■□□□□ 0.44
IKBKB-201ENST00000342222 MIER1Q8N108 512 aa17.75■□□□□ 0.43
IKBKB-201ENST00000342222 GOLGA3Q08378 1498 aa17.71■□□□□ 0.43
IKBKB-201ENST00000342222 CLIP1P30622 1438 aa17.7■□□□□ 0.42
IKBKB-201ENST00000342222 WRNQ14191 1432 aaPredicted RBP eCLIP17.7■□□□□ 0.42
IKBKB-201ENST00000342222 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
IKBKB-201ENST00000342222 EEA1Q15075 1411 aa17.69■□□□□ 0.42
IKBKB-201ENST00000342222 TOP2AP11388 1531 aaKnown RBP17.64■□□□□ 0.41
IKBKB-201ENST00000342222 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
IKBKB-201ENST00000342222 SMARCA4P51532 1647 aa17.55■□□□□ 0.4
IKBKB-201ENST00000342222 SMARCA2P51531 1590 aa17.52■□□□□ 0.4
IKBKB-201ENST00000342222 FAM50AQ14320 339 aaKnown RBP17.51■□□□□ 0.39
IKBKB-201ENST00000342222 MYT1Q01538 1121 aa17.51■□□□□ 0.39
IKBKB-201ENST00000342222 P3H3Q8IVL6 736 aa17.45■□□□□ 0.38
IKBKB-201ENST00000342222 BCANQ96GW7 911 aa17.44■□□□□ 0.38
IKBKB-201ENST00000342222 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
IKBKB-201ENST00000342222 VPS8Q8N3P4 1428 aa17.44■□□□□ 0.38
IKBKB-201ENST00000342222 NEFLP07196 543 aa17.4■□□□□ 0.38
IKBKB-201ENST00000342222 RAPGEF2Q9Y4G8 1499 aa17.38■□□□□ 0.37
IKBKB-201ENST00000342222 KANK4Q5T7N3 995 aaPredicted RBP17.37■□□□□ 0.37
IKBKB-201ENST00000342222 DDX10Q13206 875 aaKnown RBP17.3■□□□□ 0.36
IKBKB-201ENST00000342222 HIRIP3Q9BW71 556 aaPredicted RBP17.28■□□□□ 0.36
IKBKB-201ENST00000342222 EIF4G1Q04637 1599 aaKnown RBP17.26■□□□□ 0.35
IKBKB-201ENST00000342222 ATAD2BQ9ULI0 1458 aa17.23■□□□□ 0.35
IKBKB-201ENST00000342222 SYNJ1O43426 1573 aa17.23■□□□□ 0.35
IKBKB-201ENST00000342222 KIF27Q86VH2 1401 aa17.21■□□□□ 0.35
IKBKB-201ENST00000342222 CLSPNQ9HAW4 1339 aa17.2■□□□□ 0.34
IKBKB-201ENST00000342222 DHX57Q6P158 1386 aaKnown RBP17.19■□□□□ 0.34
IKBKB-201ENST00000342222 FKBP8Q14318 412 aa17.18■□□□□ 0.34
IKBKB-201ENST00000342222 CCNB3Q8WWL7 1395 aa17.18■□□□□ 0.34
IKBKB-201ENST00000342222 SUPT16HQ9Y5B9 1047 aaKnown RBP17.18■□□□□ 0.34
IKBKB-201ENST00000342222 ANP32CO43423 234 aa17.18■□□□□ 0.34
IKBKB-201ENST00000342222 SIN3AQ96ST3 1273 aa17.18■□□□□ 0.34
IKBKB-201ENST00000342222 CNGB1Q14028 1251 aaPredicted RBP17.16■□□□□ 0.34
IKBKB-201ENST00000342222 TRIM52Q96A61 297 aa17.16■□□□□ 0.34
IKBKB-201ENST00000342222 KIF21BO75037 1637 aa17.14■□□□□ 0.33
IKBKB-201ENST00000342222 KCNH8Q96L42 1107 aa17.1■□□□□ 0.33
IKBKB-201ENST00000342222 ERICH6Q7L0X2 663 aa17.09■□□□□ 0.33
IKBKB-201ENST00000342222 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
IKBKB-201ENST00000342222 RAB3GAP2Q9H2M9 1393 aa17.06■□□□□ 0.32
IKBKB-201ENST00000342222 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
IKBKB-201ENST00000342222 CUX2O14529 1486 aa17.05■□□□□ 0.32
IKBKB-201ENST00000342222 TONSLQ96HA7 1378 aa17.05■□□□□ 0.32
IKBKB-201ENST00000342222 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.32
IKBKB-201ENST00000342222 ARAP1Q96P48 1450 aa17■□□□□ 0.31
IKBKB-201ENST00000342222 CARMIL1Q5VZK9 1371 aa17■□□□□ 0.31
IKBKB-201ENST00000342222 BICRAQ9NZM4 1560 aa16.99■□□□□ 0.31
IKBKB-201ENST00000342222 CHIC2Q9UKJ5 165 aa16.98■□□□□ 0.31
IKBKB-201ENST00000342222 HNRNPUQ00839 825 aaKnown RBP eCLIP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms