RNA–Protein interactions for RNA: ENST00000629753.1

IKBKB-230, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2 BASIC

Gene IKBKB, Length 4,069 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-230ENST00000629753 NISCHQ9Y2I1 1504 aa24.05■■□□□ 1.44
IKBKB-230ENST00000629753 DCAF8L2P0C7V8 631 aa21.5■■□□□ 1.03
IKBKB-230ENST00000629753 SHROOM4Q9ULL8 1493 aa21.49■■□□□ 1.03
IKBKB-230ENST00000629753 SUPT5HO00267 1087 aaKnown RBP21.24■□□□□ 0.99
IKBKB-230ENST00000629753 ZCCHC6Q5VYS8 1495 aaKnown RBP20.19■□□□□ 0.82
IKBKB-230ENST00000629753 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
IKBKB-230ENST00000629753 CCDC180Q9P1Z9 1646 aa20.04■□□□□ 0.8
IKBKB-230ENST00000629753 EHMT2Q96KQ7 1210 aa19.92■□□□□ 0.78
IKBKB-230ENST00000629753 PCGF6Q9BYE7 350 aa19.86■□□□□ 0.77
IKBKB-230ENST00000629753 FAM9AQ8IZU1 332 aaPredicted RBP19.78■□□□□ 0.76
IKBKB-230ENST00000629753 LOC105371045A0A1W2PR82 267 aa19.75■□□□□ 0.75
IKBKB-230ENST00000629753 TRIM41Q8WV44 630 aa19.61■□□□□ 0.73
IKBKB-230ENST00000629753 ABCC9O60706 1549 aa19.6■□□□□ 0.73
IKBKB-230ENST00000629753 MYO15BQ96JP2 1530 aa19.56■□□□□ 0.72
IKBKB-230ENST00000629753 SCRIBQ14160 1630 aa19.43■□□□□ 0.7
IKBKB-230ENST00000629753 HRCP23327 699 aa19.4■□□□□ 0.7
IKBKB-230ENST00000629753 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
IKBKB-230ENST00000629753 PPARGC1BQ86YN6 1023 aaKnown RBP19.27■□□□□ 0.67
IKBKB-230ENST00000629753 TTBK1Q5TCY1 1321 aaPredicted RBP19.2■□□□□ 0.66
IKBKB-230ENST00000629753 TRIM26Q12899 539 aaPredicted RBP19.19■□□□□ 0.66
IKBKB-230ENST00000629753 RSF1Q96T23 1441 aaPredicted RBP19.18■□□□□ 0.66
IKBKB-230ENST00000629753 PABPN1Q86U42 306 aaKnown RBP eCLIP19.06■□□□□ 0.64
IKBKB-230ENST00000629753 CECR2Q9BXF3 1484 aa18.98■□□□□ 0.63
IKBKB-230ENST00000629753 UBTFP17480 764 aaKnown RBP18.91■□□□□ 0.62
IKBKB-230ENST00000629753 RANGAP1P46060 587 aaPredicted RBP18.89■□□□□ 0.61
IKBKB-230ENST00000629753 RB1CC1Q8TDY2 1594 aa18.87■□□□□ 0.61
IKBKB-230ENST00000629753 NACADO15069 1562 aa18.86■□□□□ 0.61
IKBKB-230ENST00000629753 ZEB1P37275 1124 aaPredicted RBP18.81■□□□□ 0.6
IKBKB-230ENST00000629753 CCER1Q8TC90 406 aaPredicted RBP18.79■□□□□ 0.6
IKBKB-230ENST00000629753 MROH2BQ7Z745 1585 aa18.79■□□□□ 0.6
IKBKB-230ENST00000629753 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.69■□□□□ 0.58
IKBKB-230ENST00000629753 APLP2Q06481 763 aa18.64■□□□□ 0.57
IKBKB-230ENST00000629753 WIZO95785 1651 aa18.62■□□□□ 0.57
IKBKB-230ENST00000629753 BAZ1AQ9NRL2 1556 aaPredicted RBP18.53■□□□□ 0.56
IKBKB-230ENST00000629753 CSRNP3Q8WYN3 585 aa18.52■□□□□ 0.56
IKBKB-230ENST00000629753 HNRNPUL2Q1KMD3 747 aaKnown RBP18.45■□□□□ 0.54
IKBKB-230ENST00000629753 ABCC8Q09428 1581 aa18.41■□□□□ 0.54
IKBKB-230ENST00000629753 CCDC88BA6NC98 1476 aa18.4■□□□□ 0.54
IKBKB-230ENST00000629753 PELP1Q8IZL8 1130 aaKnown RBP18.39■□□□□ 0.53
IKBKB-230ENST00000629753 SOGA1O94964 1423 aa18.35■□□□□ 0.53
IKBKB-230ENST00000629753 CEP162Q5TB80 1403 aa18.27■□□□□ 0.51
IKBKB-230ENST00000629753 TOP2AP11388 1531 aaKnown RBP18.25■□□□□ 0.51
IKBKB-230ENST00000629753 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
IKBKB-230ENST00000629753 ATP1B4Q9UN42 357 aaPredicted RBP18.24■□□□□ 0.51
IKBKB-230ENST00000629753 WRNQ14191 1432 aaPredicted RBP eCLIP18.22■□□□□ 0.51
IKBKB-230ENST00000629753 ITGAEP38570 1179 aa18.19■□□□□ 0.5
IKBKB-230ENST00000629753 DIEXFQ68CQ4 756 aaKnown RBP18.18■□□□□ 0.5
IKBKB-230ENST00000629753 YTHDC1Q96MU7 727 aaKnown RBP18.17■□□□□ 0.5
IKBKB-230ENST00000629753 RUSC2Q8N2Y8 1516 aa18.17■□□□□ 0.5
IKBKB-230ENST00000629753 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
IKBKB-230ENST00000629753 TNIKQ9UKE5 1360 aa18.14■□□□□ 0.49
IKBKB-230ENST00000629753 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
IKBKB-230ENST00000629753 CENPBP07199 599 aaPredicted RBP18.08■□□□□ 0.49
IKBKB-230ENST00000629753 EEA1Q15075 1411 aa18.08■□□□□ 0.49
IKBKB-230ENST00000629753 GOLGA3Q08378 1498 aa18.08■□□□□ 0.49
IKBKB-230ENST00000629753 CLIP1P30622 1438 aa18.05■□□□□ 0.48
IKBKB-230ENST00000629753 ATAD2BQ9ULI0 1458 aa17.99■□□□□ 0.47
IKBKB-230ENST00000629753 CEP164Q9UPV0 1460 aa17.96■□□□□ 0.46
IKBKB-230ENST00000629753 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
IKBKB-230ENST00000629753 ZNF316A6NFI3 1004 aaPredicted RBP17.94■□□□□ 0.46
IKBKB-230ENST00000629753 P3H3Q8IVL6 736 aa17.94■□□□□ 0.46
IKBKB-230ENST00000629753 UNC13AQ9UPW8 1703 aa17.9■□□□□ 0.46
IKBKB-230ENST00000629753 BICRAQ9NZM4 1560 aa17.88■□□□□ 0.45
IKBKB-230ENST00000629753 RAPGEF2Q9Y4G8 1499 aa17.83■□□□□ 0.45
IKBKB-230ENST00000629753 FAM50AQ14320 339 aaKnown RBP17.83■□□□□ 0.44
IKBKB-230ENST00000629753 NEUROD1Q13562 356 aa17.82■□□□□ 0.44
IKBKB-230ENST00000629753 ACIN1Q9UKV3 1341 aaKnown RBP17.81■□□□□ 0.44
IKBKB-230ENST00000629753 GTF3C3Q9Y5Q9 886 aa17.81■□□□□ 0.44
IKBKB-230ENST00000629753 EIF4G1Q04637 1599 aaKnown RBP17.78■□□□□ 0.44
IKBKB-230ENST00000629753 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
IKBKB-230ENST00000629753 VPS8Q8N3P4 1428 aa17.76■□□□□ 0.43
IKBKB-230ENST00000629753 KANK4Q5T7N3 995 aaPredicted RBP17.74■□□□□ 0.43
IKBKB-230ENST00000629753 KIF27Q86VH2 1401 aa17.74■□□□□ 0.43
IKBKB-230ENST00000629753 MIER1Q8N108 512 aa17.69■□□□□ 0.42
IKBKB-230ENST00000629753 MYT1Q01538 1121 aa17.68■□□□□ 0.42
IKBKB-230ENST00000629753 CUX2O14529 1486 aa17.62■□□□□ 0.41
IKBKB-230ENST00000629753 ARID3CA6NKF2 412 aa17.58■□□□□ 0.4
IKBKB-230ENST00000629753 PEG3Q9GZU2 1588 aa17.56■□□□□ 0.4
IKBKB-230ENST00000629753 NCAPD3P42695 1498 aa17.55■□□□□ 0.4
IKBKB-230ENST00000629753 CARMIL1Q5VZK9 1371 aa17.54■□□□□ 0.4
IKBKB-230ENST00000629753 KIF21BO75037 1637 aa17.53■□□□□ 0.4
IKBKB-230ENST00000629753 CADPSQ9ULU8 1353 aa17.5■□□□□ 0.39
IKBKB-230ENST00000629753 CCNB3Q8WWL7 1395 aa17.47■□□□□ 0.39
IKBKB-230ENST00000629753 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
IKBKB-230ENST00000629753 CUX1P39880 1505 aa17.45■□□□□ 0.38
IKBKB-230ENST00000629753 HIRIP3Q9BW71 556 aaPredicted RBP17.43■□□□□ 0.38
IKBKB-230ENST00000629753 IGF1RP08069 1367 aa17.42■□□□□ 0.38
IKBKB-230ENST00000629753 ARAP1Q96P48 1450 aa17.42■□□□□ 0.38
IKBKB-230ENST00000629753 PRXQ9BXM0 1461 aa17.41■□□□□ 0.38
IKBKB-230ENST00000629753 CFTRP13569 1480 aa17.41■□□□□ 0.38
IKBKB-230ENST00000629753 SIN3AQ96ST3 1273 aa17.4■□□□□ 0.38
IKBKB-230ENST00000629753 TRIM52Q96A61 297 aa17.4■□□□□ 0.38
IKBKB-230ENST00000629753 DDX10Q13206 875 aaKnown RBP17.38■□□□□ 0.37
IKBKB-230ENST00000629753 DHX57Q6P158 1386 aaKnown RBP17.37■□□□□ 0.37
IKBKB-230ENST00000629753 CHIC2Q9UKJ5 165 aa17.36■□□□□ 0.37
IKBKB-230ENST00000629753 HMGXB3Q12766 1538 aa17.35■□□□□ 0.37
IKBKB-230ENST00000629753 FGD5Q6ZNL6 1462 aa17.35■□□□□ 0.37
IKBKB-230ENST00000629753 MTUS2Q5JR59 1369 aa17.35■□□□□ 0.37
IKBKB-230ENST00000629753 TDRD9Q8NDG6 1382 aaKnown RBP17.34■□□□□ 0.37
IKBKB-230ENST00000629753 FBLN2P98095 1184 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms