Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HLA-AP01891 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-AP01891 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-AP01891 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-AP01891 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-AP01891 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-AP01891 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-AP01891 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HLA-AP01891 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HLA-AP01891 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
HLA-AP01891 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HLA-AP01891 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-AP01891 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-AP01891 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 KRT8P20-201ENST00000423953 1409 ntBASIC16.22■□□□□ 0.19
HLA-AP01891 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HLA-AP01891 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.22■□□□□ 0.19
HLA-AP01891 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.22■□□□□ 0.19
HLA-AP01891 NTF6G-201ENST00000591094 616 ntBASIC16.22■□□□□ 0.19
HLA-AP01891 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.22■□□□□ 0.19
HLA-AP01891 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.22■□□□□ 0.19
HLA-AP01891 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HLA-AP01891 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-AP01891 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-AP01891 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 PHGDH-210ENST00000641115 1638 ntBASIC16.22■□□□□ 0.19
HLA-AP01891 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HLA-AP01891 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 FP475955.4-201ENST00000623131 1990 ntBASIC16.22■□□□□ 0.19
HLA-AP01891 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HLA-AP01891 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-AP01891 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-AP01891 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-AP01891 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-AP01891 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HLA-AP01891 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-AP01891 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-AP01891 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-AP01891 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HLA-AP01891 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-AP01891 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-AP01891 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.21■□□□□ 0.19
HLA-AP01891 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HLA-AP01891 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-AP01891 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.21■□□□□ 0.19
HLA-AP01891 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.21■□□□□ 0.19
HLA-AP01891 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-AP01891 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.21■□□□□ 0.19
HLA-AP01891 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-AP01891 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-AP01891 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-AP01891 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.21■□□□□ 0.19
HLA-AP01891 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.21■□□□□ 0.19
HLA-AP01891 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-AP01891 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.21■□□□□ 0.19
HLA-AP01891 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-AP01891 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-AP01891 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-AP01891 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms