Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.24■□□□□ 0.515e-6■□□□□ 8.5
NKRFO15226 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.05■□□□□ 0.485e-6■□□□□ 8.5
NKRFO15226 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.471e-7■□□□□ 8.5
NKRFO15226 C17orf62-212ENST00000577888 617 ntTSL 217.93■□□□□ 0.465e-6■□□□□ 8.5
NKRFO15226 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.465e-6■□□□□ 8.5
NKRFO15226 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.9■□□□□ 0.465e-6■□□□□ 8.5
NKRFO15226 C17orf62-232ENST00000584024 1965 ntTSL 217.89■□□□□ 0.455e-6■□□□□ 8.5
NKRFO15226 NDUFS7-205ENST00000534853 745 ntTSL 517.79■□□□□ 0.445e-6■□□□□ 8.5
NKRFO15226 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.443e-9■□□□□ 8.5
NKRFO15226 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.64■□□□□ 0.415e-6■□□□□ 8.5
NKRFO15226 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.365e-6■□□□□ 8.5
NKRFO15226 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.315e-6■□□□□ 8.5
NKRFO15226 C17orf62-235ENST00000584791 559 ntTSL 216.97■□□□□ 0.315e-6■□□□□ 8.5
NKRFO15226 MAPK8IP3-213ENST00000568271 752 ntTSL 516.91■□□□□ 0.31e-7■□□□□ 8.5
NKRFO15226 MAPK8IP3-203ENST00000561765 2374 ntTSL 1 (best)16.82■□□□□ 0.281e-7■□□□□ 8.5
NKRFO15226 FDFT1-215ENST00000529464 932 ntTSL 1 (best)16.64■□□□□ 0.255e-6■□□□□ 8.5
NKRFO15226 ACSL4-212ENST00000514500 696 ntTSL 516.58■□□□□ 0.245e-6■□□□□ 8.5
NKRFO15226 MAPK8IP3-207ENST00000564098 4436 ntTSL 216.39■□□□□ 0.211e-7■□□□□ 8.5
NKRFO15226 ARAP1-219ENST00000544721 773 ntTSL 216.26■□□□□ 0.191e-7■□□□□ 8.5
NKRFO15226 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.175e-6■□□□□ 8.5
NKRFO15226 NDUFS7-206ENST00000535382 3050 ntTSL 215.83■□□□□ 0.125e-6■□□□□ 8.5
NKRFO15226 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.115e-6■□□□□ 8.5
NKRFO15226 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.75■□□□□ 0.115e-6■□□□□ 8.5
NKRFO15226 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.115e-6■□□□□ 8.5
NKRFO15226 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.73■□□□□ 0.115e-6■□□□□ 8.5
NKRFO15226 FDFT1-219ENST00000531249 768 ntTSL 215.47■□□□□ 0.075e-6■□□□□ 8.5
NKRFO15226 NDUFS7-214ENST00000545446 3089 ntTSL 215.25■□□□□ 0.035e-6■□□□□ 8.5
NKRFO15226 ATP5B-206ENST00000550162 863 ntTSL 215.06■□□□□ 05e-6■□□□□ 8.5
NKRFO15226 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.035e-6■□□□□ 8.5
NKRFO15226 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.88□□□□□ -0.035e-6■□□□□ 8.5
NKRFO15226 FDFT1-204ENST00000525283 898 ntTSL 314.82□□□□□ -0.045e-6■□□□□ 8.5
NKRFO15226 EIF4A1-214ENST00000580461 909 ntTSL 214.73□□□□□ -0.055e-6■□□□□ 8.5
NKRFO15226 AC131212.3-201ENST00000624087 4219 ntBASIC14.51□□□□□ -0.095e-6■□□□□ 8.5
NKRFO15226 NDUFS7-217ENST00000591358 3743 nt14.44□□□□□ -0.15e-6■□□□□ 8.5
NKRFO15226 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.15e-6■□□□□ 8.5
NKRFO15226 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC14.2□□□□□ -0.145e-6■□□□□ 8.5
NKRFO15226 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC14.2□□□□□ -0.141e-7■□□□□ 8.5
NKRFO15226 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC14.17□□□□□ -0.145e-6■□□□□ 8.5
NKRFO15226 EIF4A1-226ENST00000582848 591 ntTSL 313.55□□□□□ -0.245e-6■□□□□ 8.5
NKRFO15226 EIF4A1-236ENST00000584901 1021 ntTSL 213.55□□□□□ -0.245e-6■□□□□ 8.5
NKRFO15226 EIF4A1-213ENST00000579139 568 ntTSL 413.37□□□□□ -0.275e-6■□□□□ 8.5
NKRFO15226 APBB2-214ENST00000508593 3592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.285e-6■□□□□ 8.5
NKRFO15226 EIF4A1-218ENST00000581544 1444 ntTSL 212.64□□□□□ -0.395e-6■□□□□ 8.5
NKRFO15226 C17orf62-215ENST00000578913 563 ntTSL 2 BASIC12.63□□□□□ -0.395e-6■□□□□ 8.5
NKRFO15226 C17orf62-231ENST00000583778 481 ntTSL 212.63□□□□□ -0.395e-6■□□□□ 8.5
NKRFO15226 C17orf62-233ENST00000584408 497 ntTSL 412.61□□□□□ -0.395e-6■□□□□ 8.5
NKRFO15226 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC12.4□□□□□ -0.425e-6■□□□□ 8.5
NKRFO15226 FDFT1-225ENST00000622850 1987 ntTSL 2 BASIC12.34□□□□□ -0.435e-6■□□□□ 8.5
NKRFO15226 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC12.33□□□□□ -0.445e-6■□□□□ 8.5
NKRFO15226 EIF4A1-223ENST00000582169 552 ntTSL 412.23□□□□□ -0.455e-6■□□□□ 8.5
NKRFO15226 EIF4A1-229ENST00000583802 563 ntTSL 412.15□□□□□ -0.465e-6■□□□□ 8.5
NKRFO15226 C17orf62-211ENST00000577834 540 ntTSL 412.04□□□□□ -0.485e-6■□□□□ 8.5
NKRFO15226 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.515e-6■□□□□ 8.5
NKRFO15226 C17orf62-220ENST00000580560 564 ntTSL 4 BASIC11.6□□□□□ -0.555e-6■□□□□ 8.5
NKRFO15226 EIF4A1-215ENST00000580886 562 ntTSL 211.32□□□□□ -0.65e-6■□□□□ 8.5
NKRFO15226 EIF4A1-231ENST00000584054 716 ntTSL 211.32□□□□□ -0.65e-6■□□□□ 8.5
NKRFO15226 SUMO2-201ENST00000314523 809 ntTSL 2 BASIC11.06□□□□□ -0.645e-6■□□□□ 8.5
NKRFO15226 EIF4A1-209ENST00000578495 916 ntTSL 511.05□□□□□ -0.645e-6■□□□□ 8.5
NKRFO15226 EIF4A1-233ENST00000584784 818 ntTSL 510.93□□□□□ -0.665e-6■□□□□ 8.5
NKRFO15226 NUTF2-208ENST00000587481 2608 nt10.82□□□□□ -0.685e-6■□□□□ 8.5
NKRFO15226 EIF4A1-232ENST00000584712 782 ntTSL 210.77□□□□□ -0.695e-6■□□□□ 8.5
NKRFO15226 ATP5B-202ENST00000547250 840 ntTSL 510.63□□□□□ -0.715e-6■□□□□ 8.5
NKRFO15226 SUMO2-202ENST00000420826 3190 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.735e-6■□□□□ 8.5
NKRFO15226 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC10.46□□□□□ -0.735e-6■□□□□ 8.5
NKRFO15226 EIF4A1-212ENST00000579085 569 ntTSL 410.45□□□□□ -0.745e-6■□□□□ 8.5
NKRFO15226 EIF4A1-237ENST00000585024 577 ntTSL 410.06□□□□□ -0.85e-6■□□□□ 8.5
NKRFO15226 SMC6-204ENST00000428868 544 ntTSL 49.84□□□□□ -0.835e-6■□□□□ 8.5
NKRFO15226 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.865e-6■□□□□ 8.5
NKRFO15226 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.885e-6■□□□□ 8.5
NKRFO15226 FDFT1-221ENST00000532266 583 ntTSL 59.53□□□□□ -0.885e-6■□□□□ 8.5
NKRFO15226 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC9.26□□□□□ -0.935e-6■□□□□ 8.5
NKRFO15226 C17orf62-236ENST00000584891 468 ntTSL 39.24□□□□□ -0.935e-6■□□□□ 8.5
NKRFO15226 ATP5B-209ENST00000551570 399 ntTSL 39.07□□□□□ -0.965e-6■□□□□ 8.5
NKRFO15226 EIF4A1-202ENST00000396527 1169 ntTSL 28.56□□□□□ -1.045e-6■□□□□ 8.5
NKRFO15226 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.76□□□□□ -1.175e-6■□□□□ 8.5
NKRFO15226 FDFT1-213ENST00000528729 570 ntTSL 37.67□□□□□ -1.185e-6■□□□□ 8.5
NKRFO15226 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.66□□□□□ -1.185e-6■□□□□ 8.5
NKRFO15226 EIF4A1-230ENST00000583899 665 ntTSL 37.2□□□□□ -1.265e-6■□□□□ 8.5
NKRFO15226 ATP5B-204ENST00000548474 449 ntTSL 37.16□□□□□ -1.265e-6■□□□□ 8.5
NKRFO15226 EIF4A1-211ENST00000578754 547 ntTSL 46.23□□□□□ -1.415e-6■□□□□ 8.5
NKRFO15226 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.635e-6■□□□□ 8.5
NKRFO15226 EIF4A1-224ENST00000582213 560 ntTSL 44.6□□□□□ -1.675e-6■□□□□ 8.5
NKRFO15226 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.18■□□□□ 0.823e-17■□□□□ 8.5
NKRFO15226 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC14.04□□□□□ -0.163e-17■□□□□ 8.5
NKRFO15226 AC139887.2-203ENST00000503185 618 ntTSL 2 BASIC12.33□□□□□ -0.443e-17■□□□□ 8.5
NKRFO15226 AC139887.2-204ENST00000503405 550 ntTSL 3 BASIC12.33□□□□□ -0.443e-17■□□□□ 8.5
NKRFO15226 CYC1-204ENST00000533444 1832 ntTSL 1 (best)29.55■■■□□ 2.324e-70■□□□□ 8.5
NKRFO15226 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.674e-70■□□□□ 8.5
NKRFO15226 CYC1-203ENST00000528618 831 ntTSL 521.18■□□□□ 0.984e-70■□□□□ 8.5
NKRFO15226 C11orf95-201ENST00000338498 723 ntTSL 1 (best)25.25■■□□□ 1.637e-8■□□□□ 8.5
NKRFO15226 NR2F6-202ENST00000596878 731 ntTSL 328.86■■■□□ 2.213e-6■□□□□ 8.5
NKRFO15226 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.723e-6■□□□□ 8.5
NKRFO15226 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.95■■□□□ 1.593e-6■□□□□ 8.5
NKRFO15226 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.15■■□□□ 1.33e-6■□□□□ 8.5
NKRFO15226 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.473e-6■□□□□ 8.5
NKRFO15226 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.136e-10■□□□□ 8.5
NKRFO15226 NME4-206ENST00000448828 1167 ntTSL 226.35■■□□□ 1.812e-10■□□□□ 8.5
NKRFO15226 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.2■■□□□ 1.622e-10■□□□□ 8.5
NKRFO15226 NME4-205ENST00000444498 1111 ntTSL 321.69■■□□□ 1.062e-10■□□□□ 8.5
NKRFO15226 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.28■□□□□ 0.842e-10■□□□□ 8.5
Retrieved 100 of 9,198 protein–RNA pairs in 55.9 ms