Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXE1O00358 RPPH1-201ENST00000516869 333 ntBASIC18.35■□□□□ 0.53
FOXE1O00358 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.35■□□□□ 0.53
FOXE1O00358 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.35■□□□□ 0.53
FOXE1O00358 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.35■□□□□ 0.53
FOXE1O00358 ITM2C-210ENST00000620962 501 ntBASIC18.35■□□□□ 0.53
FOXE1O00358 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FOXE1O00358 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
FOXE1O00358 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXE1O00358 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXE1O00358 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXE1O00358 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
FOXE1O00358 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXE1O00358 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXE1O00358 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FOXE1O00358 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
FOXE1O00358 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 AL049812.1-201ENST00000432563 2267 ntBASIC18.34■□□□□ 0.53
FOXE1O00358 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXE1O00358 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXE1O00358 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.34■□□□□ 0.53
FOXE1O00358 NIFKP9-201ENST00000419265 221 ntBASIC18.34■□□□□ 0.53
FOXE1O00358 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.34■□□□□ 0.53
FOXE1O00358 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FOXE1O00358 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXE1O00358 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.34■□□□□ 0.53
FOXE1O00358 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FOXE1O00358 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXE1O00358 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
FOXE1O00358 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXE1O00358 KRT8P41-201ENST00000533985 1514 ntBASIC18.33■□□□□ 0.53
FOXE1O00358 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXE1O00358 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXE1O00358 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXE1O00358 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.33■□□□□ 0.53
FOXE1O00358 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FOXE1O00358 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
FOXE1O00358 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.33■□□□□ 0.53
FOXE1O00358 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.33■□□□□ 0.53
FOXE1O00358 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.33■□□□□ 0.53
FOXE1O00358 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXE1O00358 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXE1O00358 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXE1O00358 AL353807.1-201ENST00000427475 662 ntBASIC18.33■□□□□ 0.52
FOXE1O00358 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXE1O00358 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.33■□□□□ 0.52
FOXE1O00358 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXE1O00358 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
FOXE1O00358 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXE1O00358 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXE1O00358 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXE1O00358 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXE1O00358 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXE1O00358 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXE1O00358 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXE1O00358 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXE1O00358 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXE1O00358 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXE1O00358 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXE1O00358 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 HTR7P1-201ENST00000538670 1336 ntBASIC18.32■□□□□ 0.52
FOXE1O00358 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXE1O00358 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
FOXE1O00358 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXE1O00358 KSR1P1-201ENST00000446298 240 ntBASIC18.32■□□□□ 0.52
FOXE1O00358 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 Z85996.1-201ENST00000494644 937 ntBASIC18.32■□□□□ 0.52
FOXE1O00358 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXE1O00358 AC131212.4-201ENST00000623606 975 ntBASIC18.32■□□□□ 0.52
FOXE1O00358 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXE1O00358 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
FOXE1O00358 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXE1O00358 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms