Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 UAP1-202ENST00000367924 2066 ntAPPRIS ALT1 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 AL049543.1-201ENST00000499525 2874 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 MSL3-207ENST00000398527 2324 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 NLRP3-201ENST00000336119 4170 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 SMIM19-204ENST00000438528 2958 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 CTNND2-205ENST00000503622 2982 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 FBXO38-202ENST00000340253 4424 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 MATN2-208ENST00000520016 3495 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 AC023790.2-201ENST00000543321 2403 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 FAM193A-204ENST00000505311 4110 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC00870-202ENST00000473713 2693 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 TYW1-201ENST00000359626 3348 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 DCAF8L2-202ENST00000451261 2295 ntAPPRIS P1 TSL 4 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 ICE2P2-201ENST00000483823 2787 ntBASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC00607-204ENST00000423530 2104 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 AC093426.1-201ENST00000561926 3011 ntBASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 MRPL30-201ENST00000338148 2605 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 AL133243.4-201ENST00000623116 3109 ntBASIC1.69□□□□□ -2.14
KRTAP4-4Q9BYR3 MOBP-201ENST00000311042 3388 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 GRB10-203ENST00000398810 4785 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 HHAT-203ENST00000367010 3626 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 RUNX1T1-215ENST00000518844 2453 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 KCTD19-201ENST00000304372 2958 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 PLCD4-203ENST00000432688 3225 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 AC011330.1-201ENST00000510070 3235 ntBASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 MMP2-208ENST00000570308 3235 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 ANKRD20A11P-206ENST00000451663 3717 ntBASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 AC091013.1-201ENST00000499752 3734 ntTSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 FOXP1-220ENST00000614176 6384 ntAPPRIS ALT1 TSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
KRTAP4-4Q9BYR3 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms