RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 DCAF8L2P0C7V8 631 aa12.78□□□□□ -0.36
SPTA1-201ENST00000368147 EHMT2Q96KQ7 1210 aa11.86□□□□□ -0.51
SPTA1-201ENST00000368147 SUPT5HO00267 1087 aaKnown RBP11.66□□□□□ -0.54
SPTA1-201ENST00000368147 PELP1Q8IZL8 1130 aaKnown RBP11.64□□□□□ -0.55
SPTA1-201ENST00000368147 SHROOM4Q9ULL8 1493 aa11.6□□□□□ -0.55
SPTA1-201ENST00000368147 TTBK1Q5TCY1 1321 aaPredicted RBP11.36□□□□□ -0.59
SPTA1-201ENST00000368147 RANGAP1P46060 587 aaPredicted RBP11.32□□□□□ -0.6
SPTA1-201ENST00000368147 MYT1Q01538 1121 aa11.23□□□□□ -0.61
SPTA1-201ENST00000368147 ATP1B4Q9UN42 357 aaPredicted RBP11.21□□□□□ -0.62
SPTA1-201ENST00000368147 FAM9AQ8IZU1 332 aaPredicted RBP11.16□□□□□ -0.62
SPTA1-201ENST00000368147 APLP2Q06481 763 aa11.15□□□□□ -0.62
SPTA1-201ENST00000368147 NISCHQ9Y2I1 1504 aa11.07□□□□□ -0.64
SPTA1-201ENST00000368147 CCER1Q8TC90 406 aaPredicted RBP11.05□□□□□ -0.64
SPTA1-201ENST00000368147 ERICH6Q7L0X2 663 aa11□□□□□ -0.65
SPTA1-201ENST00000368147 CHIC1Q5VXU3 224 aa10.96□□□□□ -0.66
SPTA1-201ENST00000368147 YTHDC1Q96MU7 727 aaKnown RBP10.94□□□□□ -0.66
SPTA1-201ENST00000368147 MYT1LQ9UL68 1186 aa10.93□□□□□ -0.66
SPTA1-201ENST00000368147 PCGF6Q9BYE7 350 aa10.81□□□□□ -0.68
SPTA1-201ENST00000368147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.74□□□□□ -0.69
SPTA1-201ENST00000368147 HNRNPUL2Q1KMD3 747 aaKnown RBP10.74□□□□□ -0.69
SPTA1-201ENST00000368147 UBTFP17480 764 aaKnown RBP10.73□□□□□ -0.69
SPTA1-201ENST00000368147 PPARGC1BQ86YN6 1023 aaKnown RBP10.71□□□□□ -0.69
SPTA1-201ENST00000368147 CNGB1Q14028 1251 aaPredicted RBP10.67□□□□□ -0.7
SPTA1-201ENST00000368147 POLR3GLQ9BT43 218 aa10.67□□□□□ -0.7
SPTA1-201ENST00000368147 TRIM41Q8WV44 630 aa10.65□□□□□ -0.7
SPTA1-201ENST00000368147 SLC4A1APQ9BWU0 796 aaKnown RBP10.63□□□□□ -0.71
SPTA1-201ENST00000368147 ITGAEP38570 1179 aa10.6□□□□□ -0.71
SPTA1-201ENST00000368147 CENPBP07199 599 aaPredicted RBP10.48□□□□□ -0.73
SPTA1-201ENST00000368147 PLPPR3Q6T4P5 718 aa10.46□□□□□ -0.74
SPTA1-201ENST00000368147 DAXXQ9UER7 740 aaPredicted RBP10.41□□□□□ -0.74
SPTA1-201ENST00000368147 FBLN2P98095 1184 aa10.39□□□□□ -0.75
SPTA1-201ENST00000368147 PABPN1Q86U42 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
SPTA1-201ENST00000368147 NEFLP07196 543 aa10.37□□□□□ -0.75
SPTA1-201ENST00000368147 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
SPTA1-201ENST00000368147 BCANQ96GW7 911 aa10.34□□□□□ -0.75
SPTA1-201ENST00000368147 BCL11AQ9H165 835 aa10.3□□□□□ -0.76
SPTA1-201ENST00000368147 ABCC9O60706 1549 aa10.27□□□□□ -0.77
SPTA1-201ENST00000368147 ARID3CA6NKF2 412 aa10.24□□□□□ -0.77
SPTA1-201ENST00000368147 FAM50AQ14320 339 aaKnown RBP10.21□□□□□ -0.77
SPTA1-201ENST00000368147 TRIM52Q96A61 297 aa10.18□□□□□ -0.78
SPTA1-201ENST00000368147 ZNF326Q5BKZ1 582 aaKnown RBP10.16□□□□□ -0.78
SPTA1-201ENST00000368147 LOC105371045A0A1W2PR82 267 aa10.14□□□□□ -0.79
SPTA1-201ENST00000368147 ZEB1P37275 1124 aaPredicted RBP10.13□□□□□ -0.79
SPTA1-201ENST00000368147 RTL5Q5HYW3 569 aaPredicted RBP10.12□□□□□ -0.79
SPTA1-201ENST00000368147 CLSPNQ9HAW4 1339 aa10.12□□□□□ -0.79
SPTA1-201ENST00000368147 NEUROD1Q13562 356 aa10.11□□□□□ -0.79
SPTA1-201ENST00000368147 GLIPR1L2Q4G1C9 344 aa10.09□□□□□ -0.79
SPTA1-201ENST00000368147 SENP3Q9H4L4 574 aaPredicted RBP10.09□□□□□ -0.79
SPTA1-201ENST00000368147 PLEKHG5O94827 1062 aa10.08□□□□□ -0.8
SPTA1-201ENST00000368147 P3H3Q8IVL6 736 aa10.07□□□□□ -0.8
SPTA1-201ENST00000368147 SCAF1Q9H7N4 1312 aaKnown RBP10.06□□□□□ -0.8
SPTA1-201ENST00000368147 ZNF316A6NFI3 1004 aaPredicted RBP10.05□□□□□ -0.8
SPTA1-201ENST00000368147 A0A0G2JS52 829 aa10.04□□□□□ -0.8
SPTA1-201ENST00000368147 ESF1Q9H501 851 aaKnown RBP10.03□□□□□ -0.8
SPTA1-201ENST00000368147 ZNF777Q9ULD5 760 aaPredicted RBP10.02□□□□□ -0.81
SPTA1-201ENST00000368147 STAG3Q9UJ98 1225 aa9.99□□□□□ -0.81
SPTA1-201ENST00000368147 CHGAP10645 457 aaKnown RBP9.98□□□□□ -0.81
SPTA1-201ENST00000368147 TRIM26Q12899 539 aaPredicted RBP9.94□□□□□ -0.82
SPTA1-201ENST00000368147 ZBTB47Q9UFB7 747 aaPredicted RBP9.94□□□□□ -0.82
SPTA1-201ENST00000368147 ZBTB7CA1YPR0 619 aa9.93□□□□□ -0.82
SPTA1-201ENST00000368147 CANXP27824 592 aaKnown RBP9.91□□□□□ -0.82
SPTA1-201ENST00000368147 NPM1P06748 294 aaKnown RBP eCLIP9.85□□□□□ -0.83
SPTA1-201ENST00000368147 NEFMP07197 916 aa9.85□□□□□ -0.83
SPTA1-201ENST00000368147 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.84□□□□□ -0.835e-7■■□□□ 13.2
SPTA1-201ENST00000368147 C14orf37Q86TY3 774 aa9.81□□□□□ -0.84
SPTA1-201ENST00000368147 HRCP23327 699 aa9.8□□□□□ -0.84
SPTA1-201ENST00000368147 SCRIBQ14160 1630 aa9.79□□□□□ -0.84
SPTA1-201ENST00000368147 ANP32BQ92688 251 aaKnown RBP9.77□□□□□ -0.85
SPTA1-201ENST00000368147 ARID4BQ4LE39 1312 aaPredicted RBP9.77□□□□□ -0.85
SPTA1-201ENST00000368147 SALL2Q9Y467 1007 aaPredicted RBP9.74□□□□□ -0.85
SPTA1-201ENST00000368147 TRHP20396 242 aaPredicted RBP9.74□□□□□ -0.85
SPTA1-201ENST00000368147 HAP1P54257 671 aaPredicted RBP9.72□□□□□ -0.85
SPTA1-201ENST00000368147 ANP32CO43423 234 aa9.72□□□□□ -0.85
SPTA1-201ENST00000368147 ARXQ96QS3 562 aa9.72□□□□□ -0.85
SPTA1-201ENST00000368147 DIEXFQ68CQ4 756 aaKnown RBP9.71□□□□□ -0.85
SPTA1-201ENST00000368147 KCNH8Q96L42 1107 aa9.7□□□□□ -0.86
SPTA1-201ENST00000368147 TULP1O00294 542 aaPredicted RBP9.69□□□□□ -0.86
SPTA1-201ENST00000368147 CHIC2Q9UKJ5 165 aa9.68□□□□□ -0.86
SPTA1-201ENST00000368147 KDM2AQ9Y2K7 1162 aa9.67□□□□□ -0.86
SPTA1-201ENST00000368147 TNNT2P45379 298 aaPredicted RBP9.67□□□□□ -0.86
SPTA1-201ENST00000368147 EIF5BO60841 1220 aaKnown RBP9.67□□□□□ -0.86
SPTA1-201ENST00000368147 NPM2Q86SE8 214 aaKnown RBP9.66□□□□□ -0.86
SPTA1-201ENST00000368147 CHMP7Q8WUX9 453 aaPredicted RBP9.65□□□□□ -0.86
SPTA1-201ENST00000368147 PPP1R15AO75807 674 aaPredicted RBP9.62□□□□□ -0.87
SPTA1-201ENST00000368147 CDK11AQ9UQ88 783 aaPredicted RBP9.62□□□□□ -0.87
SPTA1-201ENST00000368147 LMOD2Q6P5Q4 547 aa9.62□□□□□ -0.87
SPTA1-201ENST00000368147 NPHP1O15259 732 aa9.59□□□□□ -0.87
SPTA1-201ENST00000368147 TAOK2Q9UL54 1235 aa9.57□□□□□ -0.88
SPTA1-201ENST00000368147 CDK11BP21127 795 aaKnown RBP9.57□□□□□ -0.88
SPTA1-201ENST00000368147 HSP90AA1P07900 732 aaKnown RBP9.56□□□□□ -0.88
SPTA1-201ENST00000368147 SENP3-EIF4A1A0A087X0R7 540 aa9.56□□□□□ -0.88
SPTA1-201ENST00000368147 MLECQ14165 292 aa9.55□□□□□ -0.88
SPTA1-201ENST00000368147 FAM9BQ8IZU0 186 aa9.55□□□□□ -0.88
SPTA1-201ENST00000368147 ERCC6Q03468 1493 aa9.54□□□□□ -0.88
SPTA1-201ENST00000368147 PPM1GO15355 546 aaPredicted RBP9.54□□□□□ -0.88
SPTA1-201ENST00000368147 TMC1Q8TDI8 760 aa9.52□□□□□ -0.88
SPTA1-201ENST00000368147 NCBP3Q53F19 620 aaKnown RBP9.52□□□□□ -0.89
SPTA1-201ENST00000368147 TPRNQ4KMQ1 711 aa9.51□□□□□ -0.89
SPTA1-201ENST00000368147 TRIM44Q96DX7 344 aaPredicted RBP9.5□□□□□ -0.89
SPTA1-201ENST00000368147 HIRIP3Q9BW71 556 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms