RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 NISCHQ9Y2I1 1504 aa15.41■□□□□ 0.06
TMCO1-208ENST00000612311 DCAF8L2P0C7V8 631 aa15.09■□□□□ 0.01
TMCO1-208ENST00000612311 SUPT5HO00267 1087 aaKnown RBP14.53□□□□□ -0.08
TMCO1-208ENST00000612311 SHROOM4Q9ULL8 1493 aa14.41□□□□□ -0.1
TMCO1-208ENST00000612311 EHMT2Q96KQ7 1210 aa13.8□□□□□ -0.2
TMCO1-208ENST00000612311 FAM9AQ8IZU1 332 aaPredicted RBP13.63□□□□□ -0.23
TMCO1-208ENST00000612311 PCGF6Q9BYE7 350 aa13.53□□□□□ -0.24
TMCO1-208ENST00000612311 TRIM41Q8WV44 630 aa13.49□□□□□ -0.25
TMCO1-208ENST00000612311 APLP2Q06481 763 aa13.45□□□□□ -0.26
TMCO1-208ENST00000612311 TTBK1Q5TCY1 1321 aaPredicted RBP13.33□□□□□ -0.28
TMCO1-208ENST00000612311 CHIC1Q5VXU3 224 aa13.25□□□□□ -0.29
TMCO1-208ENST00000612311 ZEB1P37275 1124 aaPredicted RBP13.2□□□□□ -0.3
TMCO1-208ENST00000612311 UBTFP17480 764 aaKnown RBP13.2□□□□□ -0.3
TMCO1-208ENST00000612311 RANGAP1P46060 587 aaPredicted RBP13.2□□□□□ -0.3
TMCO1-208ENST00000612311 CCER1Q8TC90 406 aaPredicted RBP13.14□□□□□ -0.31
TMCO1-208ENST00000612311 LOC105371045A0A1W2PR82 267 aa13.11□□□□□ -0.31
TMCO1-208ENST00000612311 TRIM26Q12899 539 aaPredicted RBP13.06□□□□□ -0.32
TMCO1-208ENST00000612311 PPARGC1BQ86YN6 1023 aaKnown RBP13.04□□□□□ -0.32
TMCO1-208ENST00000612311 PELP1Q8IZL8 1130 aaKnown RBP13.02□□□□□ -0.33
TMCO1-208ENST00000612311 ATP1B4Q9UN42 357 aaPredicted RBP12.99□□□□□ -0.33
TMCO1-208ENST00000612311 HRCP23327 699 aa12.99□□□□□ -0.33
TMCO1-208ENST00000612311 ABCC9O60706 1549 aa12.97□□□□□ -0.33
TMCO1-208ENST00000612311 CENPBP07199 599 aaPredicted RBP12.94□□□□□ -0.34
TMCO1-208ENST00000612311 ZCCHC6Q5VYS8 1495 aaKnown RBP12.81□□□□□ -0.36
TMCO1-208ENST00000612311 PABPN1Q86U42 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
TMCO1-208ENST00000612311 HNRNPUL2Q1KMD3 747 aaKnown RBP12.72□□□□□ -0.37
TMCO1-208ENST00000612311 YTHDC1Q96MU7 727 aaKnown RBP12.7□□□□□ -0.38
TMCO1-208ENST00000612311 ITGAEP38570 1179 aa12.7□□□□□ -0.38
TMCO1-208ENST00000612311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
TMCO1-208ENST00000612311 CCDC180Q9P1Z9 1646 aa12.64□□□□□ -0.39
TMCO1-208ENST00000612311 SCRIBQ14160 1630 aa12.56□□□□□ -0.4
TMCO1-208ENST00000612311 NEFLP07196 543 aa12.54□□□□□ -0.4
TMCO1-208ENST00000612311 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.41
TMCO1-208ENST00000612311 DIEXFQ68CQ4 756 aaKnown RBP12.48□□□□□ -0.41
TMCO1-208ENST00000612311 FAM50AQ14320 339 aaKnown RBP12.43□□□□□ -0.42
TMCO1-208ENST00000612311 ERICH6Q7L0X2 663 aa12.42□□□□□ -0.42
TMCO1-208ENST00000612311 DCAF1Q9Y4B6 1507 aa12.39□□□□□ -0.43
TMCO1-208ENST00000612311 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
TMCO1-208ENST00000612311 RSF1Q96T23 1441 aaPredicted RBP12.35□□□□□ -0.43
TMCO1-208ENST00000612311 MYT1LQ9UL68 1186 aa12.32□□□□□ -0.44
TMCO1-208ENST00000612311 NEUROD1Q13562 356 aa12.29□□□□□ -0.44
TMCO1-208ENST00000612311 MYO15BQ96JP2 1530 aa12.29□□□□□ -0.44
TMCO1-208ENST00000612311 ZNF316A6NFI3 1004 aaPredicted RBP12.27□□□□□ -0.44
TMCO1-208ENST00000612311 P3H3Q8IVL6 736 aa12.27□□□□□ -0.44
TMCO1-208ENST00000612311 TRIM52Q96A61 297 aa12.27□□□□□ -0.44
TMCO1-208ENST00000612311 CNGB1Q14028 1251 aaPredicted RBP12.26□□□□□ -0.45
TMCO1-208ENST00000612311 RB1CC1Q8TDY2 1594 aa12.23□□□□□ -0.45
TMCO1-208ENST00000612311 NACADO15069 1562 aa12.22□□□□□ -0.45
TMCO1-208ENST00000612311 FBLN2P98095 1184 aa12.19□□□□□ -0.46
TMCO1-208ENST00000612311 GTF3C3Q9Y5Q9 886 aa12.16□□□□□ -0.46
TMCO1-208ENST00000612311 MYT1Q01538 1121 aa12.16□□□□□ -0.46
TMCO1-208ENST00000612311 ARID3CA6NKF2 412 aa12.13□□□□□ -0.47
TMCO1-208ENST00000612311 ANP32CO43423 234 aa12.12□□□□□ -0.47
TMCO1-208ENST00000612311 EEA1Q15075 1411 aa12.11□□□□□ -0.47
TMCO1-208ENST00000612311 CECR2Q9BXF3 1484 aa12.1□□□□□ -0.47
TMCO1-208ENST00000612311 CLIP1P30622 1438 aa12.09□□□□□ -0.47
TMCO1-208ENST00000612311 ACIN1Q9UKV3 1341 aaKnown RBP12.09□□□□□ -0.47
TMCO1-208ENST00000612311 ZNF326Q5BKZ1 582 aaKnown RBP12.09□□□□□ -0.47
TMCO1-208ENST00000612311 WRNQ14191 1432 aaPredicted RBP eCLIP12.07□□□□□ -0.48
TMCO1-208ENST00000612311 CEP162Q5TB80 1403 aa12.06□□□□□ -0.48
TMCO1-208ENST00000612311 CDK11AQ9UQ88 783 aaPredicted RBP12.05□□□□□ -0.48
TMCO1-208ENST00000612311 BAZ1AQ9NRL2 1556 aaPredicted RBP12.05□□□□□ -0.48
TMCO1-208ENST00000612311 GOLGA3Q08378 1498 aa12.04□□□□□ -0.48
TMCO1-208ENST00000612311 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
TMCO1-208ENST00000612311 BAZ1BQ9UIG0 1483 aaKnown RBP12.01□□□□□ -0.49
TMCO1-208ENST00000612311 ZNF777Q9ULD5 760 aaPredicted RBP12.01□□□□□ -0.49
TMCO1-208ENST00000612311 BCANQ96GW7 911 aa12.01□□□□□ -0.49
TMCO1-208ENST00000612311 TNIKQ9UKE5 1360 aa12.01□□□□□ -0.49
TMCO1-208ENST00000612311 DAXXQ9UER7 740 aaPredicted RBP11.98□□□□□ -0.49
TMCO1-208ENST00000612311 TONSLQ96HA7 1378 aa11.98□□□□□ -0.49
TMCO1-208ENST00000612311 MROH2BQ7Z745 1585 aa11.95□□□□□ -0.5
TMCO1-208ENST00000612311 CEP164Q9UPV0 1460 aa11.94□□□□□ -0.5
TMCO1-208ENST00000612311 MTUS2Q5JR59 1369 aa11.93□□□□□ -0.5
TMCO1-208ENST00000612311 DDX10Q13206 875 aaKnown RBP11.92□□□□□ -0.5
TMCO1-208ENST00000612311 KIF27Q86VH2 1401 aa11.92□□□□□ -0.5
TMCO1-208ENST00000612311 CHIC2Q9UKJ5 165 aa11.92□□□□□ -0.5
TMCO1-208ENST00000612311 SOGA1O94964 1423 aa11.89□□□□□ -0.51
TMCO1-208ENST00000612311 MIER1Q8N108 512 aa11.86□□□□□ -0.51
TMCO1-208ENST00000612311 CCDC88BA6NC98 1476 aa11.86□□□□□ -0.51
TMCO1-208ENST00000612311 CLSPNQ9HAW4 1339 aa11.85□□□□□ -0.51
TMCO1-208ENST00000612311 CHMP7Q8WUX9 453 aaPredicted RBP11.83□□□□□ -0.52
TMCO1-208ENST00000612311 TSPY4P0CV99 314 aa11.8□□□□□ -0.52
TMCO1-208ENST00000612311 TSPY10P0CW01 314 aa11.8□□□□□ -0.52
TMCO1-208ENST00000612311 HNRNPUQ00839 825 aaKnown RBP eCLIP11.8□□□□□ -0.52
TMCO1-208ENST00000612311 RRP7BPQ9NSQ0 103 aa11.79□□□□□ -0.52
TMCO1-208ENST00000612311 ABCC8Q09428 1581 aa11.79□□□□□ -0.52
TMCO1-208ENST00000612311 FKBP8Q14318 412 aa11.78□□□□□ -0.52
TMCO1-208ENST00000612311 RTL5Q5HYW3 569 aaPredicted RBP11.78□□□□□ -0.52
TMCO1-208ENST00000612311 HIRIP3Q9BW71 556 aaPredicted RBP11.78□□□□□ -0.52
TMCO1-208ENST00000612311 SCAF1Q9H7N4 1312 aaKnown RBP11.77□□□□□ -0.52
TMCO1-208ENST00000612311 FAM9BQ8IZU0 186 aa11.76□□□□□ -0.53
TMCO1-208ENST00000612311 WIZO95785 1651 aa11.75□□□□□ -0.53
TMCO1-208ENST00000612311 CARMIL1Q5VZK9 1371 aa11.74□□□□□ -0.53
TMCO1-208ENST00000612311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.74□□□□□ -0.532e-6■■■■□ 19.5
TMCO1-208ENST00000612311 CUX2O14529 1486 aa11.74□□□□□ -0.53
TMCO1-208ENST00000612311 VPS8Q8N3P4 1428 aa11.73□□□□□ -0.53
TMCO1-208ENST00000612311 TOP2AP11388 1531 aaKnown RBP11.72□□□□□ -0.53
TMCO1-208ENST00000612311 EIF4G2P78344 907 aaKnown RBP eCLIP11.72□□□□□ -0.53
TMCO1-208ENST00000612311 SMARCA2P51531 1590 aa11.71□□□□□ -0.53
TMCO1-208ENST00000612311 CCNB3Q8WWL7 1395 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms