RNA–Protein interactions for RNA: ENST00000473713.5

LINC00870-202, long intergenic non-protein coding RNA 870, humanhuman

TSL 2 BASIC

Gene LINC00870, Length 2,693 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00870-202ENST00000473713 NISCHQ9Y2I1 1504 aa19.14■□□□□ 0.66
LINC00870-202ENST00000473713 ABCC9O60706 1549 aa17.31■□□□□ 0.36
LINC00870-202ENST00000473713 CCDC180Q9P1Z9 1646 aa17.12■□□□□ 0.33
LINC00870-202ENST00000473713 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
LINC00870-202ENST00000473713 RB1CC1Q8TDY2 1594 aa16.33■□□□□ 0.2
LINC00870-202ENST00000473713 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
LINC00870-202ENST00000473713 NACADO15069 1562 aa16.17■□□□□ 0.18
LINC00870-202ENST00000473713 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
LINC00870-202ENST00000473713 SHROOM4Q9ULL8 1493 aa16.08■□□□□ 0.17
LINC00870-202ENST00000473713 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.16
LINC00870-202ENST00000473713 HRCP23327 699 aa15.99■□□□□ 0.15
LINC00870-202ENST00000473713 SUPT5HO00267 1087 aaKnown RBP15.98■□□□□ 0.15
LINC00870-202ENST00000473713 BICRAQ9NZM4 1560 aa15.89■□□□□ 0.13
LINC00870-202ENST00000473713 ZCCHC6Q5VYS8 1495 aaKnown RBP15.85■□□□□ 0.13
LINC00870-202ENST00000473713 MYO15BQ96JP2 1530 aa15.84■□□□□ 0.13
LINC00870-202ENST00000473713 PPARGC1BQ86YN6 1023 aaKnown RBP15.79■□□□□ 0.12
LINC00870-202ENST00000473713 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
LINC00870-202ENST00000473713 PCGF6Q9BYE7 350 aa15.76■□□□□ 0.11
LINC00870-202ENST00000473713 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
LINC00870-202ENST00000473713 CHIC1Q5VXU3 224 aa15.66■□□□□ 0.1
LINC00870-202ENST00000473713 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
LINC00870-202ENST00000473713 PELP1Q8IZL8 1130 aaKnown RBP15.55■□□□□ 0.08
LINC00870-202ENST00000473713 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.08
LINC00870-202ENST00000473713 EIF4G1Q04637 1599 aaKnown RBP15.51■□□□□ 0.07
LINC00870-202ENST00000473713 LOC105371045A0A1W2PR82 267 aa15.36■□□□□ 0.05
LINC00870-202ENST00000473713 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
LINC00870-202ENST00000473713 TRIM26Q12899 539 aaPredicted RBP15.19■□□□□ 0.02
LINC00870-202ENST00000473713 SMARCA4P51532 1647 aa14.96□□□□□ -0.01
LINC00870-202ENST00000473713 MYT1Q01538 1121 aa14.96□□□□□ -0.02
LINC00870-202ENST00000473713 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
LINC00870-202ENST00000473713 ZEB1P37275 1124 aaPredicted RBP14.95□□□□□ -0.02
LINC00870-202ENST00000473713 NCAPD3P42695 1498 aa14.93□□□□□ -0.02
LINC00870-202ENST00000473713 ERCC6Q03468 1493 aa14.91□□□□□ -0.02
LINC00870-202ENST00000473713 NESP48681 1621 aa14.88□□□□□ -0.03
LINC00870-202ENST00000473713 SMARCA2P51531 1590 aa14.87□□□□□ -0.03
LINC00870-202ENST00000473713 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
LINC00870-202ENST00000473713 BAZ1BQ9UIG0 1483 aaKnown RBP14.84□□□□□ -0.03
LINC00870-202ENST00000473713 HMGXB3Q12766 1538 aa14.83□□□□□ -0.04
LINC00870-202ENST00000473713 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
LINC00870-202ENST00000473713 FAM9AQ8IZU1 332 aaPredicted RBP14.8□□□□□ -0.04
LINC00870-202ENST00000473713 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
LINC00870-202ENST00000473713 DNAJC5Q9H3Z4 198 aa14.79□□□□□ -0.04
LINC00870-202ENST00000473713 NEUROD1Q13562 356 aa14.75□□□□□ -0.05
LINC00870-202ENST00000473713 CUX2O14529 1486 aa14.74□□□□□ -0.05
LINC00870-202ENST00000473713 TRIM41Q8WV44 630 aa14.72□□□□□ -0.05
LINC00870-202ENST00000473713 ACIN1Q9UKV3 1341 aaKnown RBP14.72□□□□□ -0.05
LINC00870-202ENST00000473713 PEG3Q9GZU2 1588 aa14.71□□□□□ -0.05
LINC00870-202ENST00000473713 GTF3C3Q9Y5Q9 886 aa14.69□□□□□ -0.06
LINC00870-202ENST00000473713 WIZO95785 1651 aa14.68□□□□□ -0.06
LINC00870-202ENST00000473713 KIF21AQ7Z4S6 1674 aa14.67□□□□□ -0.06
LINC00870-202ENST00000473713 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.65□□□□□ -0.06
LINC00870-202ENST00000473713 THOC2Q8NI27 1593 aaKnown RBP14.63□□□□□ -0.07
LINC00870-202ENST00000473713 LAMC3Q9Y6N6 1575 aa14.62□□□□□ -0.07
LINC00870-202ENST00000473713 CCER1Q8TC90 406 aaPredicted RBP14.56□□□□□ -0.08
LINC00870-202ENST00000473713 RSF1Q96T23 1441 aaPredicted RBP14.56□□□□□ -0.08
LINC00870-202ENST00000473713 PDS5BQ9NTI5 1447 aa14.55□□□□□ -0.08
LINC00870-202ENST00000473713 DIEXFQ68CQ4 756 aaKnown RBP14.53□□□□□ -0.08
LINC00870-202ENST00000473713 CADPSQ9ULU8 1353 aa14.53□□□□□ -0.08
LINC00870-202ENST00000473713 CENPBP07199 599 aaPredicted RBP14.48□□□□□ -0.09
LINC00870-202ENST00000473713 MRC2Q9UBG0 1479 aa14.45□□□□□ -0.1
LINC00870-202ENST00000473713 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
LINC00870-202ENST00000473713 TTBK1Q5TCY1 1321 aaPredicted RBP14.42□□□□□ -0.1
LINC00870-202ENST00000473713 FANCD2Q9BXW9 1451 aa14.41□□□□□ -0.1
LINC00870-202ENST00000473713 TOP2AP11388 1531 aaKnown RBP14.39□□□□□ -0.11
LINC00870-202ENST00000473713 WDR62O43379 1518 aa14.39□□□□□ -0.11
LINC00870-202ENST00000473713 YTHDC1Q96MU7 727 aaKnown RBP14.36□□□□□ -0.11
LINC00870-202ENST00000473713 CFTRP13569 1480 aa14.35□□□□□ -0.11
LINC00870-202ENST00000473713 URB2Q14146 1524 aaKnown RBP14.3□□□□□ -0.12
LINC00870-202ENST00000473713 CCDC88BA6NC98 1476 aa14.27□□□□□ -0.12
LINC00870-202ENST00000473713 BCL11AQ9H165 835 aa14.26□□□□□ -0.13
LINC00870-202ENST00000473713 ZNF316A6NFI3 1004 aaPredicted RBP14.25□□□□□ -0.13
LINC00870-202ENST00000473713 PRDM2Q13029 1718 aa14.24□□□□□ -0.13
LINC00870-202ENST00000473713 MIER1Q8N108 512 aa14.21□□□□□ -0.13
LINC00870-202ENST00000473713 ZNF608Q9ULD9 1512 aaPredicted RBP14.17□□□□□ -0.14
LINC00870-202ENST00000473713 OSCARQ8IYS5 282 aa14.15□□□□□ -0.14
LINC00870-202ENST00000473713 TOPBP1Q92547 1522 aa14.13□□□□□ -0.15
LINC00870-202ENST00000473713 WRNQ14191 1432 aaPredicted RBP eCLIP14.11□□□□□ -0.15
LINC00870-202ENST00000473713 CEP162Q5TB80 1403 aa14.1□□□□□ -0.15
LINC00870-202ENST00000473713 IFT140Q96RY7 1462 aa14.07□□□□□ -0.16
LINC00870-202ENST00000473713 EIF4G3O43432 1585 aaKnown RBP14.06□□□□□ -0.16
LINC00870-202ENST00000473713 DNMBPQ6XZF7 1577 aa14.05□□□□□ -0.16
LINC00870-202ENST00000473713 AQRO60306 1485 aaKnown RBP eCLIP14.05□□□□□ -0.16
LINC00870-202ENST00000473713 FBLN2P98095 1184 aa14.04□□□□□ -0.16
LINC00870-202ENST00000473713 HNRNPUL2Q1KMD3 747 aaKnown RBP14.04□□□□□ -0.16
LINC00870-202ENST00000473713 ABCC8Q09428 1581 aa14.03□□□□□ -0.16
LINC00870-202ENST00000473713 SOGA1O94964 1423 aa14.02□□□□□ -0.17
LINC00870-202ENST00000473713 ANP32EQ9BTT0 268 aa14.01□□□□□ -0.17
LINC00870-202ENST00000473713 RAD54L2Q9Y4B4 1467 aa14.01□□□□□ -0.17
LINC00870-202ENST00000473713 RIMBP3CA6NJZ7 1639 aa14.01□□□□□ -0.17
LINC00870-202ENST00000473713 RIMBP3BA6NNM3 1639 aa14.01□□□□□ -0.17
LINC00870-202ENST00000473713 RIMBP3Q9UFD9 1639 aa14.01□□□□□ -0.17
LINC00870-202ENST00000473713 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
LINC00870-202ENST00000473713 CHD1O14646 1710 aa14□□□□□ -0.17
LINC00870-202ENST00000473713 TARBP1Q13395 1621 aaKnown RBP13.99□□□□□ -0.17
LINC00870-202ENST00000473713 UBTFP17480 764 aaKnown RBP13.99□□□□□ -0.17
LINC00870-202ENST00000473713 AEBP2Q6ZN18 517 aaPredicted RBP13.98□□□□□ -0.17
LINC00870-202ENST00000473713 TNIKQ9UKE5 1360 aa13.98□□□□□ -0.17
LINC00870-202ENST00000473713 CSRNP3Q8WYN3 585 aa13.98□□□□□ -0.17
LINC00870-202ENST00000473713 TDRD9Q8NDG6 1382 aaKnown RBP13.97□□□□□ -0.17
LINC00870-202ENST00000473713 RUSC2Q8N2Y8 1516 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms