RNA–Protein interactions for RNA: ENST00000367446.7

TROVE2-205, Transcript of TROVE domain family member 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROVE2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2-205ENST00000367446 NISCHQ9Y2I1 1504 aa16.49■□□□□ 0.23
TROVE2-205ENST00000367446 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
TROVE2-205ENST00000367446 PELP1Q8IZL8 1130 aaKnown RBP13.87□□□□□ -0.19
TROVE2-205ENST00000367446 ZCCHC6Q5VYS8 1495 aaKnown RBP13.87□□□□□ -0.19
TROVE2-205ENST00000367446 DCAF8L2P0C7V8 631 aa13.65□□□□□ -0.22
TROVE2-205ENST00000367446 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
TROVE2-205ENST00000367446 MYT1Q01538 1121 aa13.61□□□□□ -0.23
TROVE2-205ENST00000367446 ABCC9O60706 1549 aa13.55□□□□□ -0.24
TROVE2-205ENST00000367446 SHROOM4Q9ULL8 1493 aa13.5□□□□□ -0.25
TROVE2-205ENST00000367446 MYO15BQ96JP2 1530 aa13.47□□□□□ -0.25
TROVE2-205ENST00000367446 NACADO15069 1562 aa13.38□□□□□ -0.27
TROVE2-205ENST00000367446 RB1CC1Q8TDY2 1594 aa13.26□□□□□ -0.29
TROVE2-205ENST00000367446 SCRIBQ14160 1630 aa13.22□□□□□ -0.29
TROVE2-205ENST00000367446 PPARGC1BQ86YN6 1023 aaKnown RBP13.21□□□□□ -0.3
TROVE2-205ENST00000367446 SUPT5HO00267 1087 aaKnown RBP13.09□□□□□ -0.31
TROVE2-205ENST00000367446 HRCP23327 699 aa13.02□□□□□ -0.33
TROVE2-205ENST00000367446 TTBK1Q5TCY1 1321 aaPredicted RBP13.01□□□□□ -0.33
TROVE2-205ENST00000367446 PCGF6Q9BYE7 350 aa12.99□□□□□ -0.33
TROVE2-205ENST00000367446 UNC13AQ9UPW8 1703 aa12.94□□□□□ -0.34
TROVE2-205ENST00000367446 RSF1Q96T23 1441 aaPredicted RBP12.81□□□□□ -0.36
TROVE2-205ENST00000367446 BICRAQ9NZM4 1560 aa12.81□□□□□ -0.36
TROVE2-205ENST00000367446 CECR2Q9BXF3 1484 aa12.79□□□□□ -0.36
TROVE2-205ENST00000367446 EHMT2Q96KQ7 1210 aa12.79□□□□□ -0.36
TROVE2-205ENST00000367446 SCAF1Q9H7N4 1312 aaKnown RBP12.78□□□□□ -0.36
TROVE2-205ENST00000367446 PABPN1Q86U42 306 aaKnown RBP eCLIP12.77□□□□□ -0.36
TROVE2-205ENST00000367446 BAZ1AQ9NRL2 1556 aaPredicted RBP12.76□□□□□ -0.37
TROVE2-205ENST00000367446 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
TROVE2-205ENST00000367446 MROH2BQ7Z745 1585 aa12.73□□□□□ -0.37
TROVE2-205ENST00000367446 SMARCA4P51532 1647 aa12.67□□□□□ -0.38
TROVE2-205ENST00000367446 WIZO95785 1651 aa12.62□□□□□ -0.39
TROVE2-205ENST00000367446 BCL11AQ9H165 835 aa12.58□□□□□ -0.39
TROVE2-205ENST00000367446 LOC105371045A0A1W2PR82 267 aa12.56□□□□□ -0.4
TROVE2-205ENST00000367446 TOP2AP11388 1531 aaKnown RBP12.52□□□□□ -0.4
TROVE2-205ENST00000367446 PEG3Q9GZU2 1588 aa12.51□□□□□ -0.41
TROVE2-205ENST00000367446 ERICH6Q7L0X2 663 aa12.5□□□□□ -0.41
TROVE2-205ENST00000367446 CHIC1Q5VXU3 224 aa12.48□□□□□ -0.41
TROVE2-205ENST00000367446 SMARCA2P51531 1590 aa12.47□□□□□ -0.41
TROVE2-205ENST00000367446 EIF4G1Q04637 1599 aaKnown RBP12.45□□□□□ -0.42
TROVE2-205ENST00000367446 ATAD2BQ9ULI0 1458 aa12.45□□□□□ -0.42
TROVE2-205ENST00000367446 FAM9AQ8IZU1 332 aaPredicted RBP12.43□□□□□ -0.42
TROVE2-205ENST00000367446 BAZ1BQ9UIG0 1483 aaKnown RBP12.41□□□□□ -0.42
TROVE2-205ENST00000367446 CCDC88BA6NC98 1476 aa12.38□□□□□ -0.43
TROVE2-205ENST00000367446 APLP2Q06481 763 aa12.36□□□□□ -0.43
TROVE2-205ENST00000367446 HMGXB3Q12766 1538 aa12.34□□□□□ -0.43
TROVE2-205ENST00000367446 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
TROVE2-205ENST00000367446 CENPBP07199 599 aaPredicted RBP12.31□□□□□ -0.44
TROVE2-205ENST00000367446 TRIM41Q8WV44 630 aa12.26□□□□□ -0.45
TROVE2-205ENST00000367446 CC2D2AQ9P2K1 1620 aa12.25□□□□□ -0.45
TROVE2-205ENST00000367446 ACIN1Q9UKV3 1341 aaKnown RBP12.23□□□□□ -0.45
TROVE2-205ENST00000367446 GTF3C3Q9Y5Q9 886 aa12.21□□□□□ -0.46
TROVE2-205ENST00000367446 YTHDC1Q96MU7 727 aaKnown RBP12.16□□□□□ -0.46
TROVE2-205ENST00000367446 NEUROD1Q13562 356 aa12.15□□□□□ -0.46
TROVE2-205ENST00000367446 ABCC8Q09428 1581 aa12.13□□□□□ -0.47
TROVE2-205ENST00000367446 SLC24A1O60721 1099 aa12.13□□□□□ -0.47
TROVE2-205ENST00000367446 WRNQ14191 1432 aaPredicted RBP eCLIP12.09□□□□□ -0.47
TROVE2-205ENST00000367446 CFTRP13569 1480 aa12.08□□□□□ -0.48
TROVE2-205ENST00000367446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.05□□□□□ -0.48
TROVE2-205ENST00000367446 CADPSQ9ULU8 1353 aa12.04□□□□□ -0.48
TROVE2-205ENST00000367446 ANP32EQ9BTT0 268 aa12.02□□□□□ -0.49
TROVE2-205ENST00000367446 PRDM2Q13029 1718 aa12.02□□□□□ -0.49
TROVE2-205ENST00000367446 ZEB1P37275 1124 aaPredicted RBP12□□□□□ -0.49
TROVE2-205ENST00000367446 SYNJ1O43426 1573 aa12□□□□□ -0.49
TROVE2-205ENST00000367446 EEA1Q15075 1411 aa11.96□□□□□ -0.49
TROVE2-205ENST00000367446 TOP2BQ02880 1626 aa11.96□□□□□ -0.49
TROVE2-205ENST00000367446 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
TROVE2-205ENST00000367446 BIVM-ERCC5R4GMW8 1640 aa11.94□□□□□ -0.5
TROVE2-205ENST00000367446 LAMC3Q9Y6N6 1575 aa11.93□□□□□ -0.5
TROVE2-205ENST00000367446 SOGA1O94964 1423 aa11.92□□□□□ -0.5
TROVE2-205ENST00000367446 CSRNP3Q8WYN3 585 aa11.91□□□□□ -0.5
TROVE2-205ENST00000367446 FANCD2Q9BXW9 1451 aa11.91□□□□□ -0.5
TROVE2-205ENST00000367446 CUX1P39880 1505 aa11.9□□□□□ -0.5
TROVE2-205ENST00000367446 NESP48681 1621 aa11.89□□□□□ -0.51
TROVE2-205ENST00000367446 DNAJC5BQ9UF47 199 aa11.87□□□□□ -0.51
TROVE2-205ENST00000367446 PDS5BQ9NTI5 1447 aa11.85□□□□□ -0.51
TROVE2-205ENST00000367446 RUSC2Q8N2Y8 1516 aa11.85□□□□□ -0.51
TROVE2-205ENST00000367446 CCER1Q8TC90 406 aaPredicted RBP11.84□□□□□ -0.51
TROVE2-205ENST00000367446 CEP164Q9UPV0 1460 aa11.84□□□□□ -0.51
TROVE2-205ENST00000367446 DNMBPQ6XZF7 1577 aa11.81□□□□□ -0.52
TROVE2-205ENST00000367446 GOLGA3Q08378 1498 aa11.79□□□□□ -0.52
TROVE2-205ENST00000367446 KIF27Q86VH2 1401 aa11.79□□□□□ -0.52
TROVE2-205ENST00000367446 FGD5Q6ZNL6 1462 aa11.79□□□□□ -0.52
TROVE2-205ENST00000367446 TOPBP1Q92547 1522 aa11.77□□□□□ -0.52
TROVE2-205ENST00000367446 KIF21BO75037 1637 aa11.77□□□□□ -0.53
TROVE2-205ENST00000367446 EIF5BO60841 1220 aaKnown RBP11.75□□□□□ -0.53
TROVE2-205ENST00000367446 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
TROVE2-205ENST00000367446 UBTFP17480 764 aaKnown RBP11.75□□□□□ -0.53
TROVE2-205ENST00000367446 TNIKQ9UKE5 1360 aa11.75□□□□□ -0.53
TROVE2-205ENST00000367446 CUX2O14529 1486 aa11.73□□□□□ -0.53
TROVE2-205ENST00000367446 DIEXFQ68CQ4 756 aaKnown RBP11.73□□□□□ -0.53
TROVE2-205ENST00000367446 URB2Q14146 1524 aaKnown RBP11.73□□□□□ -0.53
TROVE2-205ENST00000367446 ANO8Q9HCE9 1232 aaPredicted RBP11.73□□□□□ -0.53
TROVE2-205ENST00000367446 POLA1P09884 1462 aaPredicted RBP11.72□□□□□ -0.53
TROVE2-205ENST00000367446 DAXXQ9UER7 740 aaPredicted RBP11.7□□□□□ -0.54
TROVE2-205ENST00000367446 ERICH3Q5RHP9 1530 aa11.69□□□□□ -0.54
TROVE2-205ENST00000367446 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
TROVE2-205ENST00000367446 RANGAP1P46060 587 aaPredicted RBP11.69□□□□□ -0.54
TROVE2-205ENST00000367446 PRXQ9BXM0 1461 aa11.69□□□□□ -0.54
TROVE2-205ENST00000367446 RAPGEF2Q9Y4G8 1499 aa11.68□□□□□ -0.54
TROVE2-205ENST00000367446 ABCA10Q8WWZ4 1543 aa11.68□□□□□ -0.54
TROVE2-205ENST00000367446 MRC2Q9UBG0 1479 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms