RNA–Protein interactions for RNA: ENST00000394605.2

CLDN12-203, Transcript of claudin 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN12, Length 3,488 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-203ENST00000394605 NISCHQ9Y2I1 1504 aa11.8□□□□□ -0.52
CLDN12-203ENST00000394605 CCDC180Q9P1Z9 1646 aa10.36□□□□□ -0.75
CLDN12-203ENST00000394605 ZCCHC6Q5VYS8 1495 aaKnown RBP10.23□□□□□ -0.77
CLDN12-203ENST00000394605 MYO15BQ96JP2 1530 aa10.19□□□□□ -0.78
CLDN12-203ENST00000394605 DCAF1Q9Y4B6 1507 aa10.17□□□□□ -0.78
CLDN12-203ENST00000394605 HRCP23327 699 aa10.02□□□□□ -0.8
CLDN12-203ENST00000394605 ABCC9O60706 1549 aa9.82□□□□□ -0.84
CLDN12-203ENST00000394605 PELP1Q8IZL8 1130 aaKnown RBP9.8□□□□□ -0.84
CLDN12-203ENST00000394605 EIF4G1Q04637 1599 aaKnown RBP9.79□□□□□ -0.84
CLDN12-203ENST00000394605 SHROOM4Q9ULL8 1493 aa9.68□□□□□ -0.86
CLDN12-203ENST00000394605 NACADO15069 1562 aa9.63□□□□□ -0.87
CLDN12-203ENST00000394605 RB1CC1Q8TDY2 1594 aa9.62□□□□□ -0.87
CLDN12-203ENST00000394605 CHIC1Q5VXU3 224 aa9.62□□□□□ -0.87
CLDN12-203ENST00000394605 MYT1Q01538 1121 aa9.5□□□□□ -0.89
CLDN12-203ENST00000394605 SLC24A1O60721 1099 aa9.49□□□□□ -0.89
CLDN12-203ENST00000394605 UNC13AQ9UPW8 1703 aa9.46□□□□□ -0.9
CLDN12-203ENST00000394605 WRNQ14191 1432 aaPredicted RBP eCLIP9.41□□□□□ -0.9
CLDN12-203ENST00000394605 SCAF1Q9H7N4 1312 aaKnown RBP9.4□□□□□ -0.9
CLDN12-203ENST00000394605 ZEB1P37275 1124 aaPredicted RBP9.37□□□□□ -0.91
CLDN12-203ENST00000394605 TRIM26Q12899 539 aaPredicted RBP9.36□□□□□ -0.91
CLDN12-203ENST00000394605 BAZ1AQ9NRL2 1556 aaPredicted RBP9.36□□□□□ -0.91
CLDN12-203ENST00000394605 PPARGC1BQ86YN6 1023 aaKnown RBP9.33□□□□□ -0.92
CLDN12-203ENST00000394605 BICRAQ9NZM4 1560 aa9.3□□□□□ -0.92
CLDN12-203ENST00000394605 RSF1Q96T23 1441 aaPredicted RBP9.3□□□□□ -0.92
CLDN12-203ENST00000394605 PCGF6Q9BYE7 350 aa9.21□□□□□ -0.93
CLDN12-203ENST00000394605 PEG3Q9GZU2 1588 aa9.18□□□□□ -0.94
CLDN12-203ENST00000394605 TTBK1Q5TCY1 1321 aaPredicted RBP9.18□□□□□ -0.94
CLDN12-203ENST00000394605 KIF21BO75037 1637 aa9.17□□□□□ -0.94
CLDN12-203ENST00000394605 ACIN1Q9UKV3 1341 aaKnown RBP9.15□□□□□ -0.94
CLDN12-203ENST00000394605 CUX2O14529 1486 aa9.12□□□□□ -0.95
CLDN12-203ENST00000394605 TOP2AP11388 1531 aaKnown RBP9.11□□□□□ -0.95
CLDN12-203ENST00000394605 TRIM41Q8WV44 630 aa9.11□□□□□ -0.95
CLDN12-203ENST00000394605 WIZO95785 1651 aa9.09□□□□□ -0.95
CLDN12-203ENST00000394605 SMARCA2P51531 1590 aa9.07□□□□□ -0.96
CLDN12-203ENST00000394605 MROH2BQ7Z745 1585 aa9.05□□□□□ -0.96
CLDN12-203ENST00000394605 SUPT5HO00267 1087 aaKnown RBP9.03□□□□□ -0.96
CLDN12-203ENST00000394605 EEA1Q15075 1411 aa9.02□□□□□ -0.96
CLDN12-203ENST00000394605 CLSPNQ9HAW4 1339 aa9.02□□□□□ -0.96
CLDN12-203ENST00000394605 SCRIBQ14160 1630 aa9□□□□□ -0.97
CLDN12-203ENST00000394605 NEUROD1Q13562 356 aa9□□□□□ -0.97
CLDN12-203ENST00000394605 SMARCA4P51532 1647 aa9□□□□□ -0.97
CLDN12-203ENST00000394605 CC2D2AQ9P2K1 1620 aa9□□□□□ -0.97
CLDN12-203ENST00000394605 BIVM-ERCC5R4GMW8 1640 aa9□□□□□ -0.97
CLDN12-203ENST00000394605 BAZ1BQ9UIG0 1483 aaKnown RBP8.98□□□□□ -0.97
CLDN12-203ENST00000394605 SYNJ1O43426 1573 aa8.98□□□□□ -0.97
CLDN12-203ENST00000394605 EHMT2Q96KQ7 1210 aa8.97□□□□□ -0.97
CLDN12-203ENST00000394605 DNAJC5BQ9UF47 199 aa8.96□□□□□ -0.97
CLDN12-203ENST00000394605 LOC105371045A0A1W2PR82 267 aa8.96□□□□□ -0.98
CLDN12-203ENST00000394605 TNIKQ9UKE5 1360 aa8.95□□□□□ -0.98
CLDN12-203ENST00000394605 PRDM2Q13029 1718 aa8.95□□□□□ -0.98
CLDN12-203ENST00000394605 AEBP2Q6ZN18 517 aaPredicted RBP8.92□□□□□ -0.98
CLDN12-203ENST00000394605 ERICH3Q5RHP9 1530 aa8.9□□□□□ -0.98
CLDN12-203ENST00000394605 DCAF8L2P0C7V8 631 aa8.9□□□□□ -0.99
CLDN12-203ENST00000394605 CECR2Q9BXF3 1484 aa8.88□□□□□ -0.99
CLDN12-203ENST00000394605 MAP3K1Q13233 1512 aa8.88□□□□□ -0.99
CLDN12-203ENST00000394605 POLR1AO95602 1720 aaPredicted RBP8.88□□□□□ -0.99
CLDN12-203ENST00000394605 ABCC8Q09428 1581 aa8.86□□□□□ -0.99
CLDN12-203ENST00000394605 CEP162Q5TB80 1403 aa8.86□□□□□ -0.99
CLDN12-203ENST00000394605 CFAP43Q8NDM7 1665 aa8.84□□□□□ -0.99
CLDN12-203ENST00000394605 HMGXB3Q12766 1538 aa8.84□□□□□ -0.99
CLDN12-203ENST00000394605 TOP2BQ02880 1626 aa8.83□□□□□ -1
CLDN12-203ENST00000394605 CCDC88BA6NC98 1476 aa8.83□□□□□ -1
CLDN12-203ENST00000394605 RRBP1Q9P2E9 1410 aaKnown RBP8.81□□□□□ -1
CLDN12-203ENST00000394605 GOLGA3Q08378 1498 aa8.81□□□□□ -1
CLDN12-203ENST00000394605 GTF3C3Q9Y5Q9 886 aa8.8□□□□□ -1
CLDN12-203ENST00000394605 MAPKBP1O60336 1514 aa8.78□□□□□ -1
CLDN12-203ENST00000394605 PLPPR3Q6T4P5 718 aa8.77□□□□□ -1.01
CLDN12-203ENST00000394605 ABCA5Q8WWZ7 1642 aa8.77□□□□□ -1.01
CLDN12-203ENST00000394605 NCAPD3P42695 1498 aa8.76□□□□□ -1.01
CLDN12-203ENST00000394605 VPS8Q8N3P4 1428 aa8.75□□□□□ -1.01
CLDN12-203ENST00000394605 CEP164Q9UPV0 1460 aa8.75□□□□□ -1.01
CLDN12-203ENST00000394605 CENPBP07199 599 aaPredicted RBP8.74□□□□□ -1.01
CLDN12-203ENST00000394605 DIEXFQ68CQ4 756 aaKnown RBP8.74□□□□□ -1.01
CLDN12-203ENST00000394605 KDM5BQ9UGL1 1544 aa8.74□□□□□ -1.01
CLDN12-203ENST00000394605 ZNF316A6NFI3 1004 aaPredicted RBP8.72□□□□□ -1.01
CLDN12-203ENST00000394605 ARAP1Q96P48 1450 aa8.71□□□□□ -1.02
CLDN12-203ENST00000394605 PRXQ9BXM0 1461 aa8.71□□□□□ -1.02
CLDN12-203ENST00000394605 CLIP1P30622 1438 aa8.69□□□□□ -1.02
CLDN12-203ENST00000394605 LAMC3Q9Y6N6 1575 aa8.68□□□□□ -1.02
CLDN12-203ENST00000394605 DHX57Q6P158 1386 aaKnown RBP8.68□□□□□ -1.02
CLDN12-203ENST00000394605 SOGA1O94964 1423 aa8.67□□□□□ -1.02
CLDN12-203ENST00000394605 RUSC2Q8N2Y8 1516 aa8.66□□□□□ -1.02
CLDN12-203ENST00000394605 THOC2Q8NI27 1593 aaKnown RBP8.66□□□□□ -1.02
CLDN12-203ENST00000394605 ANP32EQ9BTT0 268 aa8.66□□□□□ -1.02
CLDN12-203ENST00000394605 RTN4Q9NQC3 1192 aaKnown RBP8.66□□□□□ -1.02
CLDN12-203ENST00000394605 KIF21AQ7Z4S6 1674 aa8.65□□□□□ -1.02
CLDN12-203ENST00000394605 TSHZ2Q9NRE2 1034 aa8.63□□□□□ -1.03
CLDN12-203ENST00000394605 LRRIQ1Q96JM4 1722 aa8.62□□□□□ -1.03
CLDN12-203ENST00000394605 SUPT16HQ9Y5B9 1047 aaKnown RBP8.62□□□□□ -1.03
CLDN12-203ENST00000394605 DNAJC5Q9H3Z4 198 aa8.61□□□□□ -1.03
CLDN12-203ENST00000394605 GCC2Q8IWJ2 1684 aa8.61□□□□□ -1.03
CLDN12-203ENST00000394605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.61□□□□□ -1.03
CLDN12-203ENST00000394605 TIAM1Q13009 1591 aa8.6□□□□□ -1.03
CLDN12-203ENST00000394605 WDR97A6NE52 1622 aa8.59□□□□□ -1.03
CLDN12-203ENST00000394605 BCL11AQ9H165 835 aa8.58□□□□□ -1.04
CLDN12-203ENST00000394605 PHF23Q9BUL5 403 aaPredicted RBP8.57□□□□□ -1.04
CLDN12-203ENST00000394605 PABPN1Q86U42 306 aaKnown RBP eCLIP8.57□□□□□ -1.04
CLDN12-203ENST00000394605 HECW1Q76N89 1606 aa8.57□□□□□ -1.04
CLDN12-203ENST00000394605 FAM9AQ8IZU1 332 aaPredicted RBP8.56□□□□□ -1.04
CLDN12-203ENST00000394605 NCOA2Q15596 1464 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms