RNA–Protein interactions for RNA: ENST00000265294.8

GABRP-201, Transcript of gamma-aminobutyric acid type A receptor pi subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRP, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRP-201ENST00000265294 NISCHQ9Y2I1 1504 aa17.71■□□□□ 0.43
GABRP-201ENST00000265294 DCAF8L2P0C7V8 631 aa15.59■□□□□ 0.09
GABRP-201ENST00000265294 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.06
GABRP-201ENST00000265294 SUPT5HO00267 1087 aaKnown RBP14.98□□□□□ -0.01
GABRP-201ENST00000265294 CCDC180Q9P1Z9 1646 aa14.95□□□□□ -0.02
GABRP-201ENST00000265294 ZCCHC6Q5VYS8 1495 aaKnown RBP14.84□□□□□ -0.03
GABRP-201ENST00000265294 ABCC9O60706 1549 aa14.82□□□□□ -0.04
GABRP-201ENST00000265294 SCRIBQ14160 1630 aa14.42□□□□□ -0.1
GABRP-201ENST00000265294 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
GABRP-201ENST00000265294 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
GABRP-201ENST00000265294 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
GABRP-201ENST00000265294 CHIC1Q5VXU3 224 aa14.08□□□□□ -0.16
GABRP-201ENST00000265294 CECR2Q9BXF3 1484 aa14.07□□□□□ -0.16
GABRP-201ENST00000265294 NACADO15069 1562 aa14.05□□□□□ -0.16
GABRP-201ENST00000265294 RB1CC1Q8TDY2 1594 aa13.99□□□□□ -0.17
GABRP-201ENST00000265294 RSF1Q96T23 1441 aaPredicted RBP13.99□□□□□ -0.17
GABRP-201ENST00000265294 FAM9AQ8IZU1 332 aaPredicted RBP13.97□□□□□ -0.17
GABRP-201ENST00000265294 MYO15BQ96JP2 1530 aa13.91□□□□□ -0.18
GABRP-201ENST00000265294 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
GABRP-201ENST00000265294 MROH2BQ7Z745 1585 aa13.88□□□□□ -0.19
GABRP-201ENST00000265294 TRIM41Q8WV44 630 aa13.79□□□□□ -0.2
GABRP-201ENST00000265294 WIZO95785 1651 aa13.77□□□□□ -0.2
GABRP-201ENST00000265294 UNC13AQ9UPW8 1703 aa13.71□□□□□ -0.21
GABRP-201ENST00000265294 BICRAQ9NZM4 1560 aa13.64□□□□□ -0.23
GABRP-201ENST00000265294 BAZ1AQ9NRL2 1556 aaPredicted RBP13.6□□□□□ -0.23
GABRP-201ENST00000265294 SMARCA4P51532 1647 aa13.54□□□□□ -0.24
GABRP-201ENST00000265294 PPARGC1BQ86YN6 1023 aaKnown RBP13.53□□□□□ -0.24
GABRP-201ENST00000265294 CCDC88BA6NC98 1476 aa13.5□□□□□ -0.25
GABRP-201ENST00000265294 TTBK1Q5TCY1 1321 aaPredicted RBP13.48□□□□□ -0.25
GABRP-201ENST00000265294 PCGF6Q9BYE7 350 aa13.47□□□□□ -0.25
GABRP-201ENST00000265294 RANGAP1P46060 587 aaPredicted RBP13.47□□□□□ -0.25
GABRP-201ENST00000265294 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
GABRP-201ENST00000265294 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
GABRP-201ENST00000265294 ATAD2BQ9ULI0 1458 aa13.38□□□□□ -0.27
GABRP-201ENST00000265294 BAZ1BQ9UIG0 1483 aaKnown RBP13.38□□□□□ -0.27
GABRP-201ENST00000265294 SMARCA2P51531 1590 aa13.35□□□□□ -0.27
GABRP-201ENST00000265294 DNAJC5BQ9UF47 199 aa13.35□□□□□ -0.27
GABRP-201ENST00000265294 UBTFP17480 764 aaKnown RBP13.3□□□□□ -0.28
GABRP-201ENST00000265294 SOGA1O94964 1423 aa13.28□□□□□ -0.28
GABRP-201ENST00000265294 EIF4G1Q04637 1599 aaKnown RBP13.28□□□□□ -0.28
GABRP-201ENST00000265294 RUSC2Q8N2Y8 1516 aa13.26□□□□□ -0.29
GABRP-201ENST00000265294 WRNQ14191 1432 aaPredicted RBP eCLIP13.19□□□□□ -0.3
GABRP-201ENST00000265294 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
GABRP-201ENST00000265294 PEG3Q9GZU2 1588 aa13.1□□□□□ -0.31
GABRP-201ENST00000265294 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
GABRP-201ENST00000265294 CC2D2AQ9P2K1 1620 aa13.09□□□□□ -0.31
GABRP-201ENST00000265294 SYNJ1O43426 1573 aa13.07□□□□□ -0.32
GABRP-201ENST00000265294 NESP48681 1621 aa13.05□□□□□ -0.32
GABRP-201ENST00000265294 TRIM26Q12899 539 aaPredicted RBP13.03□□□□□ -0.32
GABRP-201ENST00000265294 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.33
GABRP-201ENST00000265294 HMGXB3Q12766 1538 aa12.95□□□□□ -0.34
GABRP-201ENST00000265294 CEP162Q5TB80 1403 aa12.95□□□□□ -0.34
GABRP-201ENST00000265294 P3H3Q8IVL6 736 aa12.94□□□□□ -0.34
GABRP-201ENST00000265294 ATP1B4Q9UN42 357 aaPredicted RBP12.93□□□□□ -0.34
GABRP-201ENST00000265294 CFTRP13569 1480 aa12.92□□□□□ -0.34
GABRP-201ENST00000265294 HRCP23327 699 aa12.91□□□□□ -0.34
GABRP-201ENST00000265294 RAPGEF2Q9Y4G8 1499 aa12.91□□□□□ -0.34
GABRP-201ENST00000265294 CUX1P39880 1505 aa12.91□□□□□ -0.34
GABRP-201ENST00000265294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.88□□□□□ -0.35
GABRP-201ENST00000265294 FANCD2Q9BXW9 1451 aa12.85□□□□□ -0.35
GABRP-201ENST00000265294 CUX2O14529 1486 aa12.85□□□□□ -0.35
GABRP-201ENST00000265294 GOLGA3Q08378 1498 aa12.85□□□□□ -0.35
GABRP-201ENST00000265294 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
GABRP-201ENST00000265294 TNIKQ9UKE5 1360 aa12.84□□□□□ -0.35
GABRP-201ENST00000265294 HNRNPUL2Q1KMD3 747 aaKnown RBP12.84□□□□□ -0.35
GABRP-201ENST00000265294 APLP2Q06481 763 aa12.83□□□□□ -0.36
GABRP-201ENST00000265294 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
GABRP-201ENST00000265294 CLIP1P30622 1438 aa12.81□□□□□ -0.36
GABRP-201ENST00000265294 TOP2BQ02880 1626 aa12.8□□□□□ -0.36
GABRP-201ENST00000265294 FGD5Q6ZNL6 1462 aa12.8□□□□□ -0.36
GABRP-201ENST00000265294 CEP164Q9UPV0 1460 aa12.79□□□□□ -0.36
GABRP-201ENST00000265294 EEA1Q15075 1411 aa12.79□□□□□ -0.36
GABRP-201ENST00000265294 KIF27Q86VH2 1401 aa12.79□□□□□ -0.36
GABRP-201ENST00000265294 ITGAEP38570 1179 aa12.78□□□□□ -0.36
GABRP-201ENST00000265294 ARID3CA6NKF2 412 aa12.77□□□□□ -0.36
GABRP-201ENST00000265294 CCER1Q8TC90 406 aaPredicted RBP12.74□□□□□ -0.37
GABRP-201ENST00000265294 IGF1RP08069 1367 aa12.73□□□□□ -0.37
GABRP-201ENST00000265294 FBLN2P98095 1184 aa12.72□□□□□ -0.37
GABRP-201ENST00000265294 CARMIL1Q5VZK9 1371 aa12.71□□□□□ -0.38
GABRP-201ENST00000265294 KANK4Q5T7N3 995 aaPredicted RBP12.71□□□□□ -0.38
GABRP-201ENST00000265294 POLA1P09884 1462 aaPredicted RBP12.68□□□□□ -0.38
GABRP-201ENST00000265294 TOPBP1Q92547 1522 aa12.67□□□□□ -0.38
GABRP-201ENST00000265294 BIVM-ERCC5R4GMW8 1640 aa12.67□□□□□ -0.38
GABRP-201ENST00000265294 URB2Q14146 1524 aaKnown RBP12.66□□□□□ -0.38
GABRP-201ENST00000265294 PDS5BQ9NTI5 1447 aa12.65□□□□□ -0.38
GABRP-201ENST00000265294 PRXQ9BXM0 1461 aa12.64□□□□□ -0.39
GABRP-201ENST00000265294 AQRO60306 1485 aaKnown RBP eCLIP12.63□□□□□ -0.39
GABRP-201ENST00000265294 ERCC6Q03468 1493 aa12.61□□□□□ -0.39
GABRP-201ENST00000265294 KIF21BO75037 1637 aa12.61□□□□□ -0.39
GABRP-201ENST00000265294 ARAP1Q96P48 1450 aa12.6□□□□□ -0.39
GABRP-201ENST00000265294 VPS8Q8N3P4 1428 aa12.59□□□□□ -0.39
GABRP-201ENST00000265294 KIF21AQ7Z4S6 1674 aa12.57□□□□□ -0.4
GABRP-201ENST00000265294 FHOD3Q2V2M9 1422 aa12.56□□□□□ -0.4
GABRP-201ENST00000265294 DNMBPQ6XZF7 1577 aa12.56□□□□□ -0.4
GABRP-201ENST00000265294 LAMC3Q9Y6N6 1575 aa12.54□□□□□ -0.4
GABRP-201ENST00000265294 FAM50AQ14320 339 aaKnown RBP12.54□□□□□ -0.4
GABRP-201ENST00000265294 ARHGAP35Q9NRY4 1499 aa12.53□□□□□ -0.4
GABRP-201ENST00000265294 ZNF608Q9ULD9 1512 aaPredicted RBP12.52□□□□□ -0.4
GABRP-201ENST00000265294 GAPVD1Q14C86 1478 aa12.52□□□□□ -0.41
GABRP-201ENST00000265294 ABCA10Q8WWZ4 1543 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms