RNA–Protein interactions for RNA: ENST00000301295.10

NLRP4-201, Transcript of NLR family pyrin domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP4, Length 3,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP4-201ENST00000301295 NISCHQ9Y2I1 1504 aa17.74■□□□□ 0.43
NLRP4-201ENST00000301295 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
NLRP4-201ENST00000301295 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
NLRP4-201ENST00000301295 DCAF8L2P0C7V8 631 aa15.5■□□□□ 0.07
NLRP4-201ENST00000301295 CHIC1Q5VXU3 224 aa15.03■□□□□ -0
NLRP4-201ENST00000301295 PCGF6Q9BYE7 350 aa14.99□□□□□ -0.01
NLRP4-201ENST00000301295 ZCCHC6Q5VYS8 1495 aaKnown RBP14.97□□□□□ -0.01
NLRP4-201ENST00000301295 HRCP23327 699 aa14.9□□□□□ -0.02
NLRP4-201ENST00000301295 PELP1Q8IZL8 1130 aaKnown RBP14.83□□□□□ -0.04
NLRP4-201ENST00000301295 MYO15BQ96JP2 1530 aa14.78□□□□□ -0.04
NLRP4-201ENST00000301295 MYT1Q01538 1121 aa14.76□□□□□ -0.05
NLRP4-201ENST00000301295 CCDC180Q9P1Z9 1646 aa14.74□□□□□ -0.05
NLRP4-201ENST00000301295 LOC105371045A0A1W2PR82 267 aa14.74□□□□□ -0.05
NLRP4-201ENST00000301295 PPARGC1BQ86YN6 1023 aaKnown RBP14.68□□□□□ -0.06
NLRP4-201ENST00000301295 EHMT2Q96KQ7 1210 aa14.6□□□□□ -0.07
NLRP4-201ENST00000301295 FAM9AQ8IZU1 332 aaPredicted RBP14.57□□□□□ -0.08
NLRP4-201ENST00000301295 SLC24A1O60721 1099 aa14.53□□□□□ -0.08
NLRP4-201ENST00000301295 TRIM26Q12899 539 aaPredicted RBP14.52□□□□□ -0.09
NLRP4-201ENST00000301295 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
NLRP4-201ENST00000301295 DCAF1Q9Y4B6 1507 aa14.43□□□□□ -0.1
NLRP4-201ENST00000301295 TTBK1Q5TCY1 1321 aaPredicted RBP14.4□□□□□ -0.1
NLRP4-201ENST00000301295 ZEB1P37275 1124 aaPredicted RBP14.33□□□□□ -0.12
NLRP4-201ENST00000301295 PRKCSHP14314 528 aaPredicted RBP14.24□□□□□ -0.13
NLRP4-201ENST00000301295 SCRIBQ14160 1630 aa14.21□□□□□ -0.13
NLRP4-201ENST00000301295 RSF1Q96T23 1441 aaPredicted RBP14.2□□□□□ -0.14
NLRP4-201ENST00000301295 ABCC9O60706 1549 aa14.11□□□□□ -0.15
NLRP4-201ENST00000301295 CCER1Q8TC90 406 aaPredicted RBP14.1□□□□□ -0.15
NLRP4-201ENST00000301295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.03□□□□□ -0.16
NLRP4-201ENST00000301295 RB1CC1Q8TDY2 1594 aa14□□□□□ -0.17
NLRP4-201ENST00000301295 APLP2Q06481 763 aa14□□□□□ -0.17
NLRP4-201ENST00000301295 CECR2Q9BXF3 1484 aa13.94□□□□□ -0.18
NLRP4-201ENST00000301295 UBTFP17480 764 aaKnown RBP13.92□□□□□ -0.18
NLRP4-201ENST00000301295 ERICH6Q7L0X2 663 aa13.88□□□□□ -0.19
NLRP4-201ENST00000301295 MROH2BQ7Z745 1585 aa13.84□□□□□ -0.19
NLRP4-201ENST00000301295 SCAF1Q9H7N4 1312 aaKnown RBP13.84□□□□□ -0.19
NLRP4-201ENST00000301295 CENPBP07199 599 aaPredicted RBP13.83□□□□□ -0.2
NLRP4-201ENST00000301295 DIEXFQ68CQ4 756 aaKnown RBP13.8□□□□□ -0.2
NLRP4-201ENST00000301295 NACADO15069 1562 aa13.79□□□□□ -0.2
NLRP4-201ENST00000301295 RANGAP1P46060 587 aaPredicted RBP13.77□□□□□ -0.21
NLRP4-201ENST00000301295 WIZO95785 1651 aa13.72□□□□□ -0.21
NLRP4-201ENST00000301295 ACIN1Q9UKV3 1341 aaKnown RBP13.72□□□□□ -0.21
NLRP4-201ENST00000301295 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.22
NLRP4-201ENST00000301295 YTHDC1Q96MU7 727 aaKnown RBP13.71□□□□□ -0.22
NLRP4-201ENST00000301295 DAXXQ9UER7 740 aaPredicted RBP13.71□□□□□ -0.22
NLRP4-201ENST00000301295 CSRNP3Q8WYN3 585 aa13.7□□□□□ -0.22
NLRP4-201ENST00000301295 NEUROD1Q13562 356 aa13.68□□□□□ -0.22
NLRP4-201ENST00000301295 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
NLRP4-201ENST00000301295 GTF3C3Q9Y5Q9 886 aa13.66□□□□□ -0.22
NLRP4-201ENST00000301295 CEP162Q5TB80 1403 aa13.65□□□□□ -0.22
NLRP4-201ENST00000301295 BAZ1AQ9NRL2 1556 aaPredicted RBP13.64□□□□□ -0.23
NLRP4-201ENST00000301295 CCDC88BA6NC98 1476 aa13.61□□□□□ -0.23
NLRP4-201ENST00000301295 ABCC8Q09428 1581 aa13.61□□□□□ -0.23
NLRP4-201ENST00000301295 SOGA1O94964 1423 aa13.6□□□□□ -0.23
NLRP4-201ENST00000301295 ZNF316A6NFI3 1004 aaPredicted RBP13.59□□□□□ -0.23
NLRP4-201ENST00000301295 TNIKQ9UKE5 1360 aa13.56□□□□□ -0.24
NLRP4-201ENST00000301295 EEA1Q15075 1411 aa13.5□□□□□ -0.25
NLRP4-201ENST00000301295 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
NLRP4-201ENST00000301295 WRNQ14191 1432 aaPredicted RBP eCLIP13.48□□□□□ -0.25
NLRP4-201ENST00000301295 GOLGA3Q08378 1498 aa13.47□□□□□ -0.25
NLRP4-201ENST00000301295 BCL11AQ9H165 835 aa13.46□□□□□ -0.25
NLRP4-201ENST00000301295 RUSC2Q8N2Y8 1516 aa13.46□□□□□ -0.25
NLRP4-201ENST00000301295 CLIP1P30622 1438 aa13.43□□□□□ -0.26
NLRP4-201ENST00000301295 MIER1Q8N108 512 aa13.42□□□□□ -0.26
NLRP4-201ENST00000301295 SMARCA4P51532 1647 aa13.41□□□□□ -0.26
NLRP4-201ENST00000301295 SMARCA2P51531 1590 aa13.4□□□□□ -0.26
NLRP4-201ENST00000301295 ITGAEP38570 1179 aa13.38□□□□□ -0.27
NLRP4-201ENST00000301295 CEP164Q9UPV0 1460 aa13.36□□□□□ -0.27
NLRP4-201ENST00000301295 EIF4G1Q04637 1599 aaKnown RBP13.32□□□□□ -0.28
NLRP4-201ENST00000301295 VPS8Q8N3P4 1428 aa13.28□□□□□ -0.28
NLRP4-201ENST00000301295 ATP1B4Q9UN42 357 aaPredicted RBP13.27□□□□□ -0.29
NLRP4-201ENST00000301295 BAZ1BQ9UIG0 1483 aaKnown RBP13.25□□□□□ -0.29
NLRP4-201ENST00000301295 RAPGEF2Q9Y4G8 1499 aa13.22□□□□□ -0.29
NLRP4-201ENST00000301295 KANK4Q5T7N3 995 aaPredicted RBP13.16□□□□□ -0.3
NLRP4-201ENST00000301295 SYNJ1O43426 1573 aa13.16□□□□□ -0.3
NLRP4-201ENST00000301295 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
NLRP4-201ENST00000301295 EIF5BO60841 1220 aaKnown RBP13.14□□□□□ -0.31
NLRP4-201ENST00000301295 FAM50AQ14320 339 aaKnown RBP13.14□□□□□ -0.31
NLRP4-201ENST00000301295 KIF21BO75037 1637 aa13.11□□□□□ -0.31
NLRP4-201ENST00000301295 CLSPNQ9HAW4 1339 aa13.11□□□□□ -0.31
NLRP4-201ENST00000301295 DHX57Q6P158 1386 aaKnown RBP13.08□□□□□ -0.32
NLRP4-201ENST00000301295 P3H3Q8IVL6 736 aa13.08□□□□□ -0.32
NLRP4-201ENST00000301295 KIF27Q86VH2 1401 aa13.07□□□□□ -0.32
NLRP4-201ENST00000301295 BCANQ96GW7 911 aa13.05□□□□□ -0.32
NLRP4-201ENST00000301295 UNC13AQ9UPW8 1703 aa13.04□□□□□ -0.32
NLRP4-201ENST00000301295 CCNB3Q8WWL7 1395 aa13.04□□□□□ -0.32
NLRP4-201ENST00000301295 BICRAQ9NZM4 1560 aa13.04□□□□□ -0.32
NLRP4-201ENST00000301295 NEFLP07196 543 aa13.03□□□□□ -0.32
NLRP4-201ENST00000301295 DDX10Q13206 875 aaKnown RBP13.01□□□□□ -0.33
NLRP4-201ENST00000301295 SUPT16HQ9Y5B9 1047 aaKnown RBP13.01□□□□□ -0.33
NLRP4-201ENST00000301295 PEG3Q9GZU2 1588 aa12.97□□□□□ -0.33
NLRP4-201ENST00000301295 HIRIP3Q9BW71 556 aaPredicted RBP12.96□□□□□ -0.33
NLRP4-201ENST00000301295 ARAP1Q96P48 1450 aa12.96□□□□□ -0.33
NLRP4-201ENST00000301295 SIN3AQ96ST3 1273 aa12.96□□□□□ -0.34
NLRP4-201ENST00000301295 PRXQ9BXM0 1461 aa12.95□□□□□ -0.34
NLRP4-201ENST00000301295 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
NLRP4-201ENST00000301295 TOP2BQ02880 1626 aa12.93□□□□□ -0.34
NLRP4-201ENST00000301295 FKBP8Q14318 412 aa12.93□□□□□ -0.34
NLRP4-201ENST00000301295 CUX2O14529 1486 aa12.92□□□□□ -0.34
NLRP4-201ENST00000301295 ANP32CO43423 234 aa12.92□□□□□ -0.34
NLRP4-201ENST00000301295 KCNH8Q96L42 1107 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms