RNA–Protein interactions for RNA: ENST00000520016.5

MATN2-208, Transcript of matrilin 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MATN2, Length 3,495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN2-208ENST00000520016 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
MATN2-208ENST00000520016 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
MATN2-208ENST00000520016 DCAF8L2P0C7V8 631 aa16.74■□□□□ 0.27
MATN2-208ENST00000520016 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
MATN2-208ENST00000520016 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
MATN2-208ENST00000520016 ABCC9O60706 1549 aa16.5■□□□□ 0.23
MATN2-208ENST00000520016 DCAF1Q9Y4B6 1507 aa16.09■□□□□ 0.17
MATN2-208ENST00000520016 SCRIBQ14160 1630 aa15.97■□□□□ 0.15
MATN2-208ENST00000520016 NACADO15069 1562 aa15.89■□□□□ 0.13
MATN2-208ENST00000520016 SUPT5HO00267 1087 aaKnown RBP15.89■□□□□ 0.13
MATN2-208ENST00000520016 MYO15BQ96JP2 1530 aa15.84■□□□□ 0.13
MATN2-208ENST00000520016 RB1CC1Q8TDY2 1594 aa15.81■□□□□ 0.12
MATN2-208ENST00000520016 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
MATN2-208ENST00000520016 UNC13AQ9UPW8 1703 aa15.56■□□□□ 0.08
MATN2-208ENST00000520016 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.07
MATN2-208ENST00000520016 BICRAQ9NZM4 1560 aa15.42■□□□□ 0.06
MATN2-208ENST00000520016 RSF1Q96T23 1441 aaPredicted RBP15.39■□□□□ 0.05
MATN2-208ENST00000520016 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
MATN2-208ENST00000520016 WIZO95785 1651 aa15.24■□□□□ 0.03
MATN2-208ENST00000520016 BAZ1AQ9NRL2 1556 aaPredicted RBP15.18■□□□□ 0.02
MATN2-208ENST00000520016 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
MATN2-208ENST00000520016 CHIC1Q5VXU3 224 aa15.04■□□□□ -0
MATN2-208ENST00000520016 EIF4G1Q04637 1599 aaKnown RBP14.96□□□□□ -0.01
MATN2-208ENST00000520016 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
MATN2-208ENST00000520016 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
MATN2-208ENST00000520016 CCDC88BA6NC98 1476 aa14.9□□□□□ -0.02
MATN2-208ENST00000520016 BAZ1BQ9UIG0 1483 aaKnown RBP14.88□□□□□ -0.03
MATN2-208ENST00000520016 SMARCA2P51531 1590 aa14.85□□□□□ -0.03
MATN2-208ENST00000520016 PEG3Q9GZU2 1588 aa14.83□□□□□ -0.04
MATN2-208ENST00000520016 CC2D2AQ9P2K1 1620 aa14.78□□□□□ -0.04
MATN2-208ENST00000520016 TRIM41Q8WV44 630 aa14.77□□□□□ -0.04
MATN2-208ENST00000520016 DNAJC5BQ9UF47 199 aa14.75□□□□□ -0.05
MATN2-208ENST00000520016 FAM9AQ8IZU1 332 aaPredicted RBP14.75□□□□□ -0.05
MATN2-208ENST00000520016 NCAPD3P42695 1498 aa14.73□□□□□ -0.05
MATN2-208ENST00000520016 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
MATN2-208ENST00000520016 ABCC8Q09428 1581 aa14.7□□□□□ -0.06
MATN2-208ENST00000520016 HMGXB3Q12766 1538 aa14.65□□□□□ -0.06
MATN2-208ENST00000520016 LOC105371045A0A1W2PR82 267 aa14.65□□□□□ -0.06
MATN2-208ENST00000520016 NESP48681 1621 aa14.49□□□□□ -0.09
MATN2-208ENST00000520016 WRNQ14191 1432 aaPredicted RBP eCLIP14.48□□□□□ -0.09
MATN2-208ENST00000520016 SYNJ1O43426 1573 aa14.44□□□□□ -0.1
MATN2-208ENST00000520016 CFTRP13569 1480 aa14.44□□□□□ -0.1
MATN2-208ENST00000520016 CADPSQ9ULU8 1353 aa14.44□□□□□ -0.1
MATN2-208ENST00000520016 SOGA1O94964 1423 aa14.43□□□□□ -0.1
MATN2-208ENST00000520016 RUSC2Q8N2Y8 1516 aa14.42□□□□□ -0.1
MATN2-208ENST00000520016 CUX1P39880 1505 aa14.33□□□□□ -0.12
MATN2-208ENST00000520016 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
MATN2-208ENST00000520016 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
MATN2-208ENST00000520016 CSRNP3Q8WYN3 585 aa14.25□□□□□ -0.13
MATN2-208ENST00000520016 RANGAP1P46060 587 aaPredicted RBP14.22□□□□□ -0.13
MATN2-208ENST00000520016 PRDM2Q13029 1718 aa14.21□□□□□ -0.13
MATN2-208ENST00000520016 BIVM-ERCC5R4GMW8 1640 aa14.2□□□□□ -0.14
MATN2-208ENST00000520016 UBTFP17480 764 aaKnown RBP14.2□□□□□ -0.14
MATN2-208ENST00000520016 LAMC3Q9Y6N6 1575 aa14.19□□□□□ -0.14
MATN2-208ENST00000520016 CEP164Q9UPV0 1460 aa14.19□□□□□ -0.14
MATN2-208ENST00000520016 FGD5Q6ZNL6 1462 aa14.19□□□□□ -0.14
MATN2-208ENST00000520016 RAD54L2Q9Y4B4 1467 aa14.17□□□□□ -0.14
MATN2-208ENST00000520016 KIF21AQ7Z4S6 1674 aa14.17□□□□□ -0.14
MATN2-208ENST00000520016 PDS5BQ9NTI5 1447 aa14.16□□□□□ -0.14
MATN2-208ENST00000520016 URB2Q14146 1524 aaKnown RBP14.15□□□□□ -0.14
MATN2-208ENST00000520016 TOPBP1Q92547 1522 aa14.14□□□□□ -0.15
MATN2-208ENST00000520016 CUX2O14529 1486 aa14.13□□□□□ -0.15
MATN2-208ENST00000520016 PPARGC1BQ86YN6 1023 aaKnown RBP14.13□□□□□ -0.15
MATN2-208ENST00000520016 POLA1P09884 1462 aaPredicted RBP14.1□□□□□ -0.15
MATN2-208ENST00000520016 RAPGEF2Q9Y4G8 1499 aa14.09□□□□□ -0.15
MATN2-208ENST00000520016 DNMBPQ6XZF7 1577 aa14.09□□□□□ -0.15
MATN2-208ENST00000520016 EEA1Q15075 1411 aa14.09□□□□□ -0.15
MATN2-208ENST00000520016 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
MATN2-208ENST00000520016 ERCC6Q03468 1493 aa14.07□□□□□ -0.16
MATN2-208ENST00000520016 TDRD9Q8NDG6 1382 aaKnown RBP14.06□□□□□ -0.16
MATN2-208ENST00000520016 TTBK1Q5TCY1 1321 aaPredicted RBP14.06□□□□□ -0.16
MATN2-208ENST00000520016 GOLGA3Q08378 1498 aa14.04□□□□□ -0.16
MATN2-208ENST00000520016 CEP162Q5TB80 1403 aa14.01□□□□□ -0.17
MATN2-208ENST00000520016 IGF1RP08069 1367 aa14□□□□□ -0.17
MATN2-208ENST00000520016 MRC2Q9UBG0 1479 aa13.99□□□□□ -0.17
MATN2-208ENST00000520016 TNIKQ9UKE5 1360 aa13.98□□□□□ -0.17
MATN2-208ENST00000520016 PCGF6Q9BYE7 350 aa13.96□□□□□ -0.17
MATN2-208ENST00000520016 PRXQ9BXM0 1461 aa13.96□□□□□ -0.17
MATN2-208ENST00000520016 KIF21BO75037 1637 aa13.96□□□□□ -0.18
MATN2-208ENST00000520016 AQRO60306 1485 aaKnown RBP eCLIP13.94□□□□□ -0.18
MATN2-208ENST00000520016 ABCA10Q8WWZ4 1543 aa13.94□□□□□ -0.18
MATN2-208ENST00000520016 CARMIL1Q5VZK9 1371 aa13.94□□□□□ -0.18
MATN2-208ENST00000520016 ZNF608Q9ULD9 1512 aaPredicted RBP13.92□□□□□ -0.18
MATN2-208ENST00000520016 CLIP1P30622 1438 aa13.89□□□□□ -0.19
MATN2-208ENST00000520016 GAPVD1Q14C86 1478 aa13.88□□□□□ -0.19
MATN2-208ENST00000520016 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
MATN2-208ENST00000520016 TARBP1Q13395 1621 aaKnown RBP13.88□□□□□ -0.19
MATN2-208ENST00000520016 WDR62O43379 1518 aa13.87□□□□□ -0.19
MATN2-208ENST00000520016 THOC2Q8NI27 1593 aaKnown RBP13.86□□□□□ -0.19
MATN2-208ENST00000520016 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
MATN2-208ENST00000520016 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
MATN2-208ENST00000520016 ABCA5Q8WWZ7 1642 aa13.83□□□□□ -0.2
MATN2-208ENST00000520016 FBLN2P98095 1184 aa13.81□□□□□ -0.2
MATN2-208ENST00000520016 IFT140Q96RY7 1462 aa13.79□□□□□ -0.2
MATN2-208ENST00000520016 HRCP23327 699 aa13.78□□□□□ -0.2
MATN2-208ENST00000520016 ARAP1Q96P48 1450 aa13.76□□□□□ -0.21
MATN2-208ENST00000520016 ATP1B4Q9UN42 357 aaPredicted RBP13.74□□□□□ -0.21
MATN2-208ENST00000520016 EIF4G3O43432 1585 aaKnown RBP13.74□□□□□ -0.21
MATN2-208ENST00000520016 TRIM26Q12899 539 aaPredicted RBP13.74□□□□□ -0.21
MATN2-208ENST00000520016 ARHGAP35Q9NRY4 1499 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms