RNA–Protein interactions for RNA: ENST00000287916.8

CLDN12-201, Transcript of claudin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN12, Length 3,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-201ENST00000287916 NISCHQ9Y2I1 1504 aa14.6□□□□□ -0.07
CLDN12-201ENST00000287916 SHROOM4Q9ULL8 1493 aa13.93□□□□□ -0.18
CLDN12-201ENST00000287916 SUPT5HO00267 1087 aaKnown RBP13.89□□□□□ -0.19
CLDN12-201ENST00000287916 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
CLDN12-201ENST00000287916 PCGF6Q9BYE7 350 aa13.49□□□□□ -0.25
CLDN12-201ENST00000287916 PPARGC1BQ86YN6 1023 aaKnown RBP13.4□□□□□ -0.27
CLDN12-201ENST00000287916 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
CLDN12-201ENST00000287916 HRCP23327 699 aa13.2□□□□□ -0.3
CLDN12-201ENST00000287916 LOC105371045A0A1W2PR82 267 aa13.12□□□□□ -0.31
CLDN12-201ENST00000287916 CHIC1Q5VXU3 224 aa13.05□□□□□ -0.32
CLDN12-201ENST00000287916 FAM9AQ8IZU1 332 aaPredicted RBP13.03□□□□□ -0.32
CLDN12-201ENST00000287916 TTBK1Q5TCY1 1321 aaPredicted RBP12.9□□□□□ -0.34
CLDN12-201ENST00000287916 MYO15BQ96JP2 1530 aa12.89□□□□□ -0.35
CLDN12-201ENST00000287916 TRIM26Q12899 539 aaPredicted RBP12.68□□□□□ -0.38
CLDN12-201ENST00000287916 TRIM41Q8WV44 630 aa12.61□□□□□ -0.39
CLDN12-201ENST00000287916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.56□□□□□ -0.4
CLDN12-201ENST00000287916 YTHDC1Q96MU7 727 aaKnown RBP12.55□□□□□ -0.4
CLDN12-201ENST00000287916 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
CLDN12-201ENST00000287916 CCER1Q8TC90 406 aaPredicted RBP12.53□□□□□ -0.4
CLDN12-201ENST00000287916 ZEB1P37275 1124 aaPredicted RBP12.41□□□□□ -0.42
CLDN12-201ENST00000287916 RANGAP1P46060 587 aaPredicted RBP12.41□□□□□ -0.42
CLDN12-201ENST00000287916 GTF3C3Q9Y5Q9 886 aa12.36□□□□□ -0.43
CLDN12-201ENST00000287916 PELP1Q8IZL8 1130 aaKnown RBP12.35□□□□□ -0.43
CLDN12-201ENST00000287916 NEUROD1Q13562 356 aa12.34□□□□□ -0.43
CLDN12-201ENST00000287916 DIEXFQ68CQ4 756 aaKnown RBP12.28□□□□□ -0.44
CLDN12-201ENST00000287916 ZCCHC6Q5VYS8 1495 aaKnown RBP12.27□□□□□ -0.45
CLDN12-201ENST00000287916 DCAF1Q9Y4B6 1507 aa12.26□□□□□ -0.45
CLDN12-201ENST00000287916 CCDC180Q9P1Z9 1646 aa12.26□□□□□ -0.45
CLDN12-201ENST00000287916 CENPBP07199 599 aaPredicted RBP12.26□□□□□ -0.45
CLDN12-201ENST00000287916 ACIN1Q9UKV3 1341 aaKnown RBP12.22□□□□□ -0.45
CLDN12-201ENST00000287916 HNRNPUL2Q1KMD3 747 aaKnown RBP12.19□□□□□ -0.46
CLDN12-201ENST00000287916 UBTFP17480 764 aaKnown RBP12.18□□□□□ -0.46
CLDN12-201ENST00000287916 MIER1Q8N108 512 aa11.98□□□□□ -0.49
CLDN12-201ENST00000287916 ITGAEP38570 1179 aa11.97□□□□□ -0.49
CLDN12-201ENST00000287916 APLP2Q06481 763 aa11.97□□□□□ -0.49
CLDN12-201ENST00000287916 BCANQ96GW7 911 aa11.95□□□□□ -0.5
CLDN12-201ENST00000287916 ZNF316A6NFI3 1004 aaPredicted RBP11.93□□□□□ -0.5
CLDN12-201ENST00000287916 SCRIBQ14160 1630 aa11.91□□□□□ -0.5
CLDN12-201ENST00000287916 RSF1Q96T23 1441 aaPredicted RBP11.9□□□□□ -0.5
CLDN12-201ENST00000287916 RB1CC1Q8TDY2 1594 aa11.81□□□□□ -0.52
CLDN12-201ENST00000287916 ABCC9O60706 1549 aa11.8□□□□□ -0.52
CLDN12-201ENST00000287916 ATP1B4Q9UN42 357 aaPredicted RBP11.78□□□□□ -0.52
CLDN12-201ENST00000287916 CECR2Q9BXF3 1484 aa11.75□□□□□ -0.53
CLDN12-201ENST00000287916 PABPN1Q86U42 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
CLDN12-201ENST00000287916 MYT1Q01538 1121 aa11.72□□□□□ -0.53
CLDN12-201ENST00000287916 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
CLDN12-201ENST00000287916 HIRIP3Q9BW71 556 aaPredicted RBP11.71□□□□□ -0.53
CLDN12-201ENST00000287916 CNGB1Q14028 1251 aaPredicted RBP11.7□□□□□ -0.54
CLDN12-201ENST00000287916 CEP162Q5TB80 1403 aa11.66□□□□□ -0.54
CLDN12-201ENST00000287916 SOGA1O94964 1423 aa11.65□□□□□ -0.54
CLDN12-201ENST00000287916 KCNH8Q96L42 1107 aa11.64□□□□□ -0.55
CLDN12-201ENST00000287916 ABCC8Q09428 1581 aa11.61□□□□□ -0.55
CLDN12-201ENST00000287916 FKBP8Q14318 412 aa11.6□□□□□ -0.55
CLDN12-201ENST00000287916 TRIM52Q96A61 297 aa11.6□□□□□ -0.55
CLDN12-201ENST00000287916 SUPT16HQ9Y5B9 1047 aaKnown RBP11.6□□□□□ -0.55
CLDN12-201ENST00000287916 CCDC88BA6NC98 1476 aa11.59□□□□□ -0.55
CLDN12-201ENST00000287916 DDX10Q13206 875 aaKnown RBP11.58□□□□□ -0.56
CLDN12-201ENST00000287916 MROH2BQ7Z745 1585 aa11.57□□□□□ -0.56
CLDN12-201ENST00000287916 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
CLDN12-201ENST00000287916 NEFLP07196 543 aa11.56□□□□□ -0.56
CLDN12-201ENST00000287916 RUSC2Q8N2Y8 1516 aa11.56□□□□□ -0.56
CLDN12-201ENST00000287916 FAM50AQ14320 339 aaKnown RBP11.52□□□□□ -0.56
CLDN12-201ENST00000287916 SENP3-EIF4A1A0A087X0R7 540 aa11.52□□□□□ -0.57
CLDN12-201ENST00000287916 P3H3Q8IVL6 736 aa11.52□□□□□ -0.57
CLDN12-201ENST00000287916 ERICH6Q7L0X2 663 aa11.51□□□□□ -0.57
CLDN12-201ENST00000287916 WIZO95785 1651 aa11.5□□□□□ -0.57
CLDN12-201ENST00000287916 TSHZ2Q9NRE2 1034 aa11.48□□□□□ -0.57
CLDN12-201ENST00000287916 KANK4Q5T7N3 995 aaPredicted RBP11.44□□□□□ -0.58
CLDN12-201ENST00000287916 SIN3AQ96ST3 1273 aa11.44□□□□□ -0.58
CLDN12-201ENST00000287916 CLIP1P30622 1438 aa11.44□□□□□ -0.58
CLDN12-201ENST00000287916 TNIKQ9UKE5 1360 aa11.43□□□□□ -0.58
CLDN12-201ENST00000287916 POLR3GLQ9BT43 218 aa11.43□□□□□ -0.58
CLDN12-201ENST00000287916 ANP32EQ9BTT0 268 aa11.42□□□□□ -0.58
CLDN12-201ENST00000287916 BCL11AQ9H165 835 aa11.39□□□□□ -0.59
CLDN12-201ENST00000287916 NACADO15069 1562 aa11.36□□□□□ -0.59
CLDN12-201ENST00000287916 ARID3CA6NKF2 412 aa11.34□□□□□ -0.59
CLDN12-201ENST00000287916 ANP32CO43423 234 aa11.33□□□□□ -0.6
CLDN12-201ENST00000287916 HNRNPUQ00839 825 aaKnown RBP eCLIP11.33□□□□□ -0.6
CLDN12-201ENST00000287916 GOLGA3Q08378 1498 aa11.33□□□□□ -0.6
CLDN12-201ENST00000287916 RBM19Q9Y4C8 960 aaKnown RBP11.31□□□□□ -0.6
CLDN12-201ENST00000287916 WRNQ14191 1432 aaPredicted RBP eCLIP11.3□□□□□ -0.6
CLDN12-201ENST00000287916 NBR1Q14596 966 aa11.29□□□□□ -0.6
CLDN12-201ENST00000287916 FAM9BQ8IZU0 186 aa11.27□□□□□ -0.61
CLDN12-201ENST00000287916 DHX57Q6P158 1386 aaKnown RBP11.25□□□□□ -0.61
CLDN12-201ENST00000287916 RAPGEF2Q9Y4G8 1499 aa11.24□□□□□ -0.61
CLDN12-201ENST00000287916 CDK11AQ9UQ88 783 aaPredicted RBP11.24□□□□□ -0.61
CLDN12-201ENST00000287916 CHIC2Q9UKJ5 165 aa11.22□□□□□ -0.61
CLDN12-201ENST00000287916 ZNF326Q5BKZ1 582 aaKnown RBP11.22□□□□□ -0.61
CLDN12-201ENST00000287916 VPS8Q8N3P4 1428 aa11.21□□□□□ -0.61
CLDN12-201ENST00000287916 UNC13AQ9UPW8 1703 aa11.2□□□□□ -0.62
CLDN12-201ENST00000287916 SALL2Q9Y467 1007 aaPredicted RBP11.19□□□□□ -0.62
CLDN12-201ENST00000287916 B4GALNT3Q6L9W6 998 aa11.19□□□□□ -0.62
CLDN12-201ENST00000287916 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
CLDN12-201ENST00000287916 NPM2Q86SE8 214 aaKnown RBP11.17□□□□□ -0.62
CLDN12-201ENST00000287916 BAZ1BQ9UIG0 1483 aaKnown RBP11.16□□□□□ -0.62
CLDN12-201ENST00000287916 BAZ1AQ9NRL2 1556 aaPredicted RBP11.16□□□□□ -0.62
CLDN12-201ENST00000287916 RAB3GAP2Q9H2M9 1393 aa11.15□□□□□ -0.62
CLDN12-201ENST00000287916 EEA1Q15075 1411 aa11.14□□□□□ -0.63
CLDN12-201ENST00000287916 CLSPNQ9HAW4 1339 aa11.13□□□□□ -0.63
CLDN12-201ENST00000287916 CCNB3Q8WWL7 1395 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms