RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 AEBP2Q6ZN18 517 aaPredicted RBP13.58□□□□□ -0.24
PDE6A-205ENST00000617647 CHIC1Q5VXU3 224 aa13.57□□□□□ -0.24
PDE6A-205ENST00000617647 PELP1Q8IZL8 1130 aaKnown RBP12.83□□□□□ -0.36
PDE6A-205ENST00000617647 NISCHQ9Y2I1 1504 aa12.66□□□□□ -0.38
PDE6A-205ENST00000617647 MYT1Q01538 1121 aa12.58□□□□□ -0.4
PDE6A-205ENST00000617647 PHF23Q9BUL5 403 aaPredicted RBP12.39□□□□□ -0.43
PDE6A-205ENST00000617647 HRCP23327 699 aa12.2□□□□□ -0.46
PDE6A-205ENST00000617647 PPARGC1BQ86YN6 1023 aaKnown RBP12.04□□□□□ -0.48
PDE6A-205ENST00000617647 PCGF6Q9BYE7 350 aa12.04□□□□□ -0.48
PDE6A-205ENST00000617647 SCAF1Q9H7N4 1312 aaKnown RBP11.78□□□□□ -0.52
PDE6A-205ENST00000617647 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.53
PDE6A-205ENST00000617647 CENPBP07199 599 aaPredicted RBP11.69□□□□□ -0.54
PDE6A-205ENST00000617647 SUPT5HO00267 1087 aaKnown RBP11.6□□□□□ -0.55
PDE6A-205ENST00000617647 GTF3C3Q9Y5Q9 886 aa11.57□□□□□ -0.56
PDE6A-205ENST00000617647 ZEB1P37275 1124 aaPredicted RBP11.56□□□□□ -0.56
PDE6A-205ENST00000617647 BCL11AQ9H165 835 aa11.5□□□□□ -0.57
PDE6A-205ENST00000617647 ACIN1Q9UKV3 1341 aaKnown RBP11.49□□□□□ -0.57
PDE6A-205ENST00000617647 ERICH6Q7L0X2 663 aa11.44□□□□□ -0.58
PDE6A-205ENST00000617647 YTHDC1Q96MU7 727 aaKnown RBP11.4□□□□□ -0.58
PDE6A-205ENST00000617647 NEUROD1Q13562 356 aa11.38□□□□□ -0.59
PDE6A-205ENST00000617647 TRIM26Q12899 539 aaPredicted RBP11.34□□□□□ -0.59
PDE6A-205ENST00000617647 PRKCSHP14314 528 aaPredicted RBP11.31□□□□□ -0.6
PDE6A-205ENST00000617647 SHROOM4Q9ULL8 1493 aa11.27□□□□□ -0.6
PDE6A-205ENST00000617647 FAM9AQ8IZU1 332 aaPredicted RBP11.25□□□□□ -0.61
PDE6A-205ENST00000617647 DIEXFQ68CQ4 756 aaKnown RBP11.19□□□□□ -0.62
PDE6A-205ENST00000617647 ANP32EQ9BTT0 268 aa11.18□□□□□ -0.62
PDE6A-205ENST00000617647 CCER1Q8TC90 406 aaPredicted RBP11.17□□□□□ -0.62
PDE6A-205ENST00000617647 PLPPR3Q6T4P5 718 aa11.13□□□□□ -0.63
PDE6A-205ENST00000617647 LOC105371045A0A1W2PR82 267 aa11.07□□□□□ -0.64
PDE6A-205ENST00000617647 EHMT2Q96KQ7 1210 aa11.06□□□□□ -0.64
PDE6A-205ENST00000617647 CSRNP3Q8WYN3 585 aa11.02□□□□□ -0.64
PDE6A-205ENST00000617647 ADRA2BP18089 450 aa10.96□□□□□ -0.65
PDE6A-205ENST00000617647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.95□□□□□ -0.66
PDE6A-205ENST00000617647 KCNA4P22459 653 aa10.9□□□□□ -0.66
PDE6A-205ENST00000617647 DCAF1Q9Y4B6 1507 aa10.88□□□□□ -0.67
PDE6A-205ENST00000617647 BCANQ96GW7 911 aa10.88□□□□□ -0.67
PDE6A-205ENST00000617647 MYO15BQ96JP2 1530 aa10.88□□□□□ -0.67
PDE6A-205ENST00000617647 NEFLP07196 543 aa10.85□□□□□ -0.67
PDE6A-205ENST00000617647 CCDC180Q9P1Z9 1646 aa10.83□□□□□ -0.68
PDE6A-205ENST00000617647 SENP3Q9H4L4 574 aaPredicted RBP10.79□□□□□ -0.68
PDE6A-205ENST00000617647 ZNF316A6NFI3 1004 aaPredicted RBP10.77□□□□□ -0.69
PDE6A-205ENST00000617647 EIF5BO60841 1220 aaKnown RBP10.77□□□□□ -0.69
PDE6A-205ENST00000617647 APLP2Q06481 763 aa10.77□□□□□ -0.69
PDE6A-205ENST00000617647 SLC24A1O60721 1099 aa10.75□□□□□ -0.69
PDE6A-205ENST00000617647 TSHZ2Q9NRE2 1034 aa10.75□□□□□ -0.69
PDE6A-205ENST00000617647 ZCCHC6Q5VYS8 1495 aaKnown RBP10.74□□□□□ -0.69
PDE6A-205ENST00000617647 PPP6R1Q9UPN7 881 aa10.73□□□□□ -0.69
PDE6A-205ENST00000617647 ANO8Q9HCE9 1232 aaPredicted RBP10.73□□□□□ -0.69
PDE6A-205ENST00000617647 DCAF8L2P0C7V8 631 aa10.72□□□□□ -0.69
PDE6A-205ENST00000617647 CLSPNQ9HAW4 1339 aa10.72□□□□□ -0.69
PDE6A-205ENST00000617647 SUPT16HQ9Y5B9 1047 aaKnown RBP10.71□□□□□ -0.69
PDE6A-205ENST00000617647 MIER1Q8N108 512 aa10.71□□□□□ -0.7
PDE6A-205ENST00000617647 RTL5Q5HYW3 569 aaPredicted RBP10.7□□□□□ -0.7
PDE6A-205ENST00000617647 CCDC136Q96JN2 1154 aa10.7□□□□□ -0.7
PDE6A-205ENST00000617647 MYT1LQ9UL68 1186 aa10.68□□□□□ -0.7
PDE6A-205ENST00000617647 RTN4Q9NQC3 1192 aaKnown RBP10.63□□□□□ -0.71
PDE6A-205ENST00000617647 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.63□□□□□ -0.71
PDE6A-205ENST00000617647 DEKP35659 375 aaKnown RBP10.63□□□□□ -0.71
PDE6A-205ENST00000617647 FKBP8Q14318 412 aa10.62□□□□□ -0.71
PDE6A-205ENST00000617647 NBR1Q14596 966 aa10.61□□□□□ -0.71
PDE6A-205ENST00000617647 TRIM41Q8WV44 630 aa10.58□□□□□ -0.72
PDE6A-205ENST00000617647 RBM19Q9Y4C8 960 aaKnown RBP10.57□□□□□ -0.72
PDE6A-205ENST00000617647 CDK11AQ9UQ88 783 aaPredicted RBP10.57□□□□□ -0.72
PDE6A-205ENST00000617647 ITGAEP38570 1179 aa10.55□□□□□ -0.72
PDE6A-205ENST00000617647 SALL2Q9Y467 1007 aaPredicted RBP10.55□□□□□ -0.72
PDE6A-205ENST00000617647 GLIPR1L2Q4G1C9 344 aa10.52□□□□□ -0.72
PDE6A-205ENST00000617647 ERICH6BQ5W0A0 696 aa10.46□□□□□ -0.73
PDE6A-205ENST00000617647 PKNOX2Q96KN3 472 aa10.45□□□□□ -0.74
PDE6A-205ENST00000617647 UBE2Q2Q8WVN8 375 aa10.44□□□□□ -0.74
PDE6A-205ENST00000617647 HNRNPUL2Q1KMD3 747 aaKnown RBP10.42□□□□□ -0.74
PDE6A-205ENST00000617647 PODXL2Q9NZ53 605 aa10.39□□□□□ -0.75
PDE6A-205ENST00000617647 ANP32AP39687 249 aaKnown RBP10.34□□□□□ -0.75
PDE6A-205ENST00000617647 ZBTB22O15209 634 aa10.32□□□□□ -0.76
PDE6A-205ENST00000617647 FOXD1Q16676 465 aa10.31□□□□□ -0.76
PDE6A-205ENST00000617647 NOP58Q9Y2X3 529 aaKnown RBP10.31□□□□□ -0.76
PDE6A-205ENST00000617647 IL27Q8NEV9 243 aa10.3□□□□□ -0.76
PDE6A-205ENST00000617647 ZBTB47Q9UFB7 747 aaPredicted RBP10.3□□□□□ -0.76
PDE6A-205ENST00000617647 IRX6P78412 446 aaPredicted RBP10.29□□□□□ -0.76
PDE6A-205ENST00000617647 MSH5O43196 834 aa10.28□□□□□ -0.76
PDE6A-205ENST00000617647 PLEKHG5O94827 1062 aa10.28□□□□□ -0.76
PDE6A-205ENST00000617647 TRIM52Q96A61 297 aa10.28□□□□□ -0.76
PDE6A-205ENST00000617647 DAXXQ9UER7 740 aaPredicted RBP10.28□□□□□ -0.76
PDE6A-205ENST00000617647 VSIG10Q8N0Z9 540 aa10.27□□□□□ -0.77
PDE6A-205ENST00000617647 TIMELESSQ9UNS1 1208 aa10.26□□□□□ -0.77
PDE6A-205ENST00000617647 NPM2Q86SE8 214 aaKnown RBP10.25□□□□□ -0.77
PDE6A-205ENST00000617647 FANCIQ9NVI1 1328 aa10.24□□□□□ -0.77
PDE6A-205ENST00000617647 NEFMP07197 916 aa10.23□□□□□ -0.77
PDE6A-205ENST00000617647 ABCC9O60706 1549 aa10.22□□□□□ -0.77
PDE6A-205ENST00000617647 A0A0U1RQG5 324 aaPredicted RBP10.21□□□□□ -0.78
PDE6A-205ENST00000617647 SLC4A1APQ9BWU0 796 aaKnown RBP10.18□□□□□ -0.78
PDE6A-205ENST00000617647 UBTFP17480 764 aaKnown RBP10.17□□□□□ -0.78
PDE6A-205ENST00000617647 LAS1LQ9Y4W2 734 aaKnown RBP10.17□□□□□ -0.78
PDE6A-205ENST00000617647 ANP32CO43423 234 aa10.16□□□□□ -0.78
PDE6A-205ENST00000617647 SCRIBQ14160 1630 aa10.14□□□□□ -0.79
PDE6A-205ENST00000617647 DDX10Q13206 875 aaKnown RBP10.13□□□□□ -0.79
PDE6A-205ENST00000617647 RANGAP1P46060 587 aaPredicted RBP10.12□□□□□ -0.79
PDE6A-205ENST00000617647 RSPH6AQ9H0K4 717 aa10.12□□□□□ -0.79
PDE6A-205ENST00000617647 NAP1L5Q96NT1 182 aaPredicted RBP10.11□□□□□ -0.79
PDE6A-205ENST00000617647 HNRNPUQ00839 825 aaKnown RBP eCLIP10.11□□□□□ -0.79
PDE6A-205ENST00000617647 KCNH8Q96L42 1107 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms