RNA–Protein interactions for RNA: ENST00000518844.5

RUNX1T1-215, Transcript of RUNX1 translocation partner 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RUNX1T1, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-215ENST00000518844 NISCHQ9Y2I1 1504 aa20.68■□□□□ 0.9
RUNX1T1-215ENST00000518844 CCDC180Q9P1Z9 1646 aa17.83■□□□□ 0.44
RUNX1T1-215ENST00000518844 PELP1Q8IZL8 1130 aaKnown RBP17.55■□□□□ 0.4
RUNX1T1-215ENST00000518844 MYT1Q01538 1121 aa17.45■□□□□ 0.38
RUNX1T1-215ENST00000518844 ZCCHC6Q5VYS8 1495 aaKnown RBP17.43■□□□□ 0.38
RUNX1T1-215ENST00000518844 SHROOM4Q9ULL8 1493 aa17.22■□□□□ 0.35
RUNX1T1-215ENST00000518844 DCAF8L2P0C7V8 631 aa17.13■□□□□ 0.33
RUNX1T1-215ENST00000518844 DCAF1Q9Y4B6 1507 aa17.02■□□□□ 0.32
RUNX1T1-215ENST00000518844 TTBK1Q5TCY1 1321 aaPredicted RBP16.9■□□□□ 0.3
RUNX1T1-215ENST00000518844 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
RUNX1T1-215ENST00000518844 ABCC9O60706 1549 aa16.77■□□□□ 0.28
RUNX1T1-215ENST00000518844 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
RUNX1T1-215ENST00000518844 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
RUNX1T1-215ENST00000518844 NACADO15069 1562 aa16.56■□□□□ 0.24
RUNX1T1-215ENST00000518844 RB1CC1Q8TDY2 1594 aa16.42■□□□□ 0.22
RUNX1T1-215ENST00000518844 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
RUNX1T1-215ENST00000518844 CECR2Q9BXF3 1484 aa16.12■□□□□ 0.17
RUNX1T1-215ENST00000518844 UNC13AQ9UPW8 1703 aa16.1■□□□□ 0.17
RUNX1T1-215ENST00000518844 SLC24A1O60721 1099 aa16.06■□□□□ 0.16
RUNX1T1-215ENST00000518844 CHIC1Q5VXU3 224 aa16.06■□□□□ 0.16
RUNX1T1-215ENST00000518844 ERICH6Q7L0X2 663 aa16.04■□□□□ 0.16
RUNX1T1-215ENST00000518844 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
RUNX1T1-215ENST00000518844 PRKCSHP14314 528 aaPredicted RBP16.04■□□□□ 0.16
RUNX1T1-215ENST00000518844 BAZ1AQ9NRL2 1556 aaPredicted RBP15.93■□□□□ 0.14
RUNX1T1-215ENST00000518844 APLP2Q06481 763 aa15.93■□□□□ 0.14
RUNX1T1-215ENST00000518844 BICRAQ9NZM4 1560 aa15.93■□□□□ 0.14
RUNX1T1-215ENST00000518844 WIZO95785 1651 aa15.92■□□□□ 0.14
RUNX1T1-215ENST00000518844 PABPN1Q86U42 306 aaKnown RBP eCLIP15.91■□□□□ 0.14
RUNX1T1-215ENST00000518844 SMARCA4P51532 1647 aa15.84■□□□□ 0.13
RUNX1T1-215ENST00000518844 HRCP23327 699 aa15.72■□□□□ 0.11
RUNX1T1-215ENST00000518844 TOP2AP11388 1531 aaKnown RBP15.7■□□□□ 0.1
RUNX1T1-215ENST00000518844 TRIM41Q8WV44 630 aa15.61■□□□□ 0.09
RUNX1T1-215ENST00000518844 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
RUNX1T1-215ENST00000518844 SMARCA2P51531 1590 aa15.59■□□□□ 0.09
RUNX1T1-215ENST00000518844 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
RUNX1T1-215ENST00000518844 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
RUNX1T1-215ENST00000518844 BCL11AQ9H165 835 aa15.54■□□□□ 0.08
RUNX1T1-215ENST00000518844 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
RUNX1T1-215ENST00000518844 LOC105371045A0A1W2PR82 267 aa15.53■□□□□ 0.08
RUNX1T1-215ENST00000518844 BAZ1BQ9UIG0 1483 aaKnown RBP15.46■□□□□ 0.07
RUNX1T1-215ENST00000518844 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
RUNX1T1-215ENST00000518844 DAXXQ9UER7 740 aaPredicted RBP15.42■□□□□ 0.06
RUNX1T1-215ENST00000518844 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
RUNX1T1-215ENST00000518844 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
RUNX1T1-215ENST00000518844 NCAPD3P42695 1498 aa15.31■□□□□ 0.04
RUNX1T1-215ENST00000518844 HMGXB3Q12766 1538 aa15.3■□□□□ 0.04
RUNX1T1-215ENST00000518844 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
RUNX1T1-215ENST00000518844 WRNQ14191 1432 aaPredicted RBP eCLIP15.22■□□□□ 0.03
RUNX1T1-215ENST00000518844 SOGA1O94964 1423 aa15.18■□□□□ 0.02
RUNX1T1-215ENST00000518844 SYNJ1O43426 1573 aa15.17■□□□□ 0.02
RUNX1T1-215ENST00000518844 CENPBP07199 599 aaPredicted RBP15.16■□□□□ 0.02
RUNX1T1-215ENST00000518844 CC2D2AQ9P2K1 1620 aa15.13■□□□□ 0.01
RUNX1T1-215ENST00000518844 RUSC2Q8N2Y8 1516 aa15.11■□□□□ 0.01
RUNX1T1-215ENST00000518844 PCGF6Q9BYE7 350 aa15.1■□□□□ 0.01
RUNX1T1-215ENST00000518844 CFTRP13569 1480 aa15.07■□□□□ 0
RUNX1T1-215ENST00000518844 EEA1Q15075 1411 aa15.07■□□□□ 0
RUNX1T1-215ENST00000518844 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
RUNX1T1-215ENST00000518844 TOP2BQ02880 1626 aa15.04■□□□□ -0
RUNX1T1-215ENST00000518844 BIVM-ERCC5R4GMW8 1640 aa14.99□□□□□ -0.01
RUNX1T1-215ENST00000518844 CADPSQ9ULU8 1353 aa14.97□□□□□ -0.01
RUNX1T1-215ENST00000518844 CUX1P39880 1505 aa14.97□□□□□ -0.01
RUNX1T1-215ENST00000518844 PRDM2Q13029 1718 aa14.94□□□□□ -0.02
RUNX1T1-215ENST00000518844 TRIM26Q12899 539 aaPredicted RBP14.94□□□□□ -0.02
RUNX1T1-215ENST00000518844 GOLGA3Q08378 1498 aa14.93□□□□□ -0.02
RUNX1T1-215ENST00000518844 CEP162Q5TB80 1403 aa14.92□□□□□ -0.02
RUNX1T1-215ENST00000518844 TNIKQ9UKE5 1360 aa14.92□□□□□ -0.02
RUNX1T1-215ENST00000518844 EIF5BO60841 1220 aaKnown RBP14.92□□□□□ -0.02
RUNX1T1-215ENST00000518844 UBTFP17480 764 aaKnown RBP14.92□□□□□ -0.02
RUNX1T1-215ENST00000518844 CEP164Q9UPV0 1460 aa14.9□□□□□ -0.02
RUNX1T1-215ENST00000518844 PPARGC1BQ86YN6 1023 aaKnown RBP14.89□□□□□ -0.03
RUNX1T1-215ENST00000518844 KIF21BO75037 1637 aa14.89□□□□□ -0.03
RUNX1T1-215ENST00000518844 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
RUNX1T1-215ENST00000518844 RAPGEF2Q9Y4G8 1499 aa14.84□□□□□ -0.03
RUNX1T1-215ENST00000518844 NESP48681 1621 aa14.83□□□□□ -0.04
RUNX1T1-215ENST00000518844 FANCD2Q9BXW9 1451 aa14.82□□□□□ -0.04
RUNX1T1-215ENST00000518844 ACIN1Q9UKV3 1341 aaKnown RBP14.81□□□□□ -0.04
RUNX1T1-215ENST00000518844 KIF27Q86VH2 1401 aa14.79□□□□□ -0.04
RUNX1T1-215ENST00000518844 LAMC3Q9Y6N6 1575 aa14.78□□□□□ -0.04
RUNX1T1-215ENST00000518844 PRXQ9BXM0 1461 aa14.77□□□□□ -0.04
RUNX1T1-215ENST00000518844 ANP32EQ9BTT0 268 aa14.77□□□□□ -0.05
RUNX1T1-215ENST00000518844 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
RUNX1T1-215ENST00000518844 CLIP1P30622 1438 aa14.74□□□□□ -0.05
RUNX1T1-215ENST00000518844 ERICH3Q5RHP9 1530 aa14.73□□□□□ -0.05
RUNX1T1-215ENST00000518844 CUX2O14529 1486 aa14.73□□□□□ -0.05
RUNX1T1-215ENST00000518844 DNMBPQ6XZF7 1577 aa14.7□□□□□ -0.06
RUNX1T1-215ENST00000518844 RANGAP1P46060 587 aaPredicted RBP14.69□□□□□ -0.06
RUNX1T1-215ENST00000518844 TOPBP1Q92547 1522 aa14.68□□□□□ -0.06
RUNX1T1-215ENST00000518844 IGF1RP08069 1367 aa14.66□□□□□ -0.06
RUNX1T1-215ENST00000518844 POLA1P09884 1462 aaPredicted RBP14.65□□□□□ -0.06
RUNX1T1-215ENST00000518844 RAD54L2Q9Y4B4 1467 aa14.64□□□□□ -0.07
RUNX1T1-215ENST00000518844 ZEB1P37275 1124 aaPredicted RBP14.64□□□□□ -0.07
RUNX1T1-215ENST00000518844 URB2Q14146 1524 aaKnown RBP14.63□□□□□ -0.07
RUNX1T1-215ENST00000518844 VPS8Q8N3P4 1428 aa14.63□□□□□ -0.07
RUNX1T1-215ENST00000518844 PDS5BQ9NTI5 1447 aa14.63□□□□□ -0.07
RUNX1T1-215ENST00000518844 UBE2Q2Q8WVN8 375 aa14.62□□□□□ -0.07
RUNX1T1-215ENST00000518844 GTF3C3Q9Y5Q9 886 aa14.6□□□□□ -0.07
RUNX1T1-215ENST00000518844 ABCA10Q8WWZ4 1543 aa14.6□□□□□ -0.07
RUNX1T1-215ENST00000518844 KIF21AQ7Z4S6 1674 aa14.59□□□□□ -0.07
RUNX1T1-215ENST00000518844 CARMIL1Q5VZK9 1371 aa14.58□□□□□ -0.08
RUNX1T1-215ENST00000518844 ARAP1Q96P48 1450 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms