RNA–Protein interactions for RNA: ENST00000524746.5

NFRKB-202, Transcript of nuclear factor related to kappaB binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NFRKB, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-202ENST00000524746 NISCHQ9Y2I1 1504 aa16■□□□□ 0.15
NFRKB-202ENST00000524746 DCAF8L2P0C7V8 631 aa15□□□□□ -0.01
NFRKB-202ENST00000524746 SHROOM4Q9ULL8 1493 aa14.53□□□□□ -0.08
NFRKB-202ENST00000524746 SUPT5HO00267 1087 aaKnown RBP14.24□□□□□ -0.13
NFRKB-202ENST00000524746 PCGF6Q9BYE7 350 aa13.85□□□□□ -0.19
NFRKB-202ENST00000524746 HRCP23327 699 aa13.61□□□□□ -0.23
NFRKB-202ENST00000524746 EHMT2Q96KQ7 1210 aa13.58□□□□□ -0.24
NFRKB-202ENST00000524746 ABCC9O60706 1549 aa13.54□□□□□ -0.24
NFRKB-202ENST00000524746 PPARGC1BQ86YN6 1023 aaKnown RBP13.54□□□□□ -0.24
NFRKB-202ENST00000524746 ZCCHC6Q5VYS8 1495 aaKnown RBP13.39□□□□□ -0.27
NFRKB-202ENST00000524746 FAM9AQ8IZU1 332 aaPredicted RBP13.33□□□□□ -0.27
NFRKB-202ENST00000524746 PELP1Q8IZL8 1130 aaKnown RBP13.33□□□□□ -0.28
NFRKB-202ENST00000524746 CCDC180Q9P1Z9 1646 aa13.26□□□□□ -0.29
NFRKB-202ENST00000524746 CHIC1Q5VXU3 224 aa13.26□□□□□ -0.29
NFRKB-202ENST00000524746 LOC105371045A0A1W2PR82 267 aa13.25□□□□□ -0.29
NFRKB-202ENST00000524746 PABPN1Q86U42 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
NFRKB-202ENST00000524746 ZEB1P37275 1124 aaPredicted RBP13.16□□□□□ -0.3
NFRKB-202ENST00000524746 TRIM26Q12899 539 aaPredicted RBP13.15□□□□□ -0.31
NFRKB-202ENST00000524746 TTBK1Q5TCY1 1321 aaPredicted RBP13.13□□□□□ -0.31
NFRKB-202ENST00000524746 SCRIBQ14160 1630 aa13.1□□□□□ -0.31
NFRKB-202ENST00000524746 CCER1Q8TC90 406 aaPredicted RBP13.04□□□□□ -0.32
NFRKB-202ENST00000524746 CENPBP07199 599 aaPredicted RBP13.04□□□□□ -0.32
NFRKB-202ENST00000524746 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
NFRKB-202ENST00000524746 MYO15BQ96JP2 1530 aa12.99□□□□□ -0.33
NFRKB-202ENST00000524746 YTHDC1Q96MU7 727 aaKnown RBP12.97□□□□□ -0.33
NFRKB-202ENST00000524746 MYT1Q01538 1121 aa12.87□□□□□ -0.35
NFRKB-202ENST00000524746 RANGAP1P46060 587 aaPredicted RBP12.86□□□□□ -0.35
NFRKB-202ENST00000524746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
NFRKB-202ENST00000524746 SCAF1Q9H7N4 1312 aaKnown RBP12.8□□□□□ -0.36
NFRKB-202ENST00000524746 GTF3C3Q9Y5Q9 886 aa12.79□□□□□ -0.36
NFRKB-202ENST00000524746 CECR2Q9BXF3 1484 aa12.79□□□□□ -0.36
NFRKB-202ENST00000524746 RSF1Q96T23 1441 aaPredicted RBP12.77□□□□□ -0.37
NFRKB-202ENST00000524746 DIEXFQ68CQ4 756 aaKnown RBP12.74□□□□□ -0.37
NFRKB-202ENST00000524746 DCAF1Q9Y4B6 1507 aa12.7□□□□□ -0.38
NFRKB-202ENST00000524746 ACIN1Q9UKV3 1341 aaKnown RBP12.69□□□□□ -0.38
NFRKB-202ENST00000524746 APLP2Q06481 763 aa12.64□□□□□ -0.39
NFRKB-202ENST00000524746 NEUROD1Q13562 356 aa12.63□□□□□ -0.39
NFRKB-202ENST00000524746 UBTFP17480 764 aaKnown RBP12.61□□□□□ -0.39
NFRKB-202ENST00000524746 RB1CC1Q8TDY2 1594 aa12.61□□□□□ -0.39
NFRKB-202ENST00000524746 MROH2BQ7Z745 1585 aa12.6□□□□□ -0.39
NFRKB-202ENST00000524746 NACADO15069 1562 aa12.54□□□□□ -0.4
NFRKB-202ENST00000524746 HNRNPUL2Q1KMD3 747 aaKnown RBP12.52□□□□□ -0.4
NFRKB-202ENST00000524746 WIZO95785 1651 aa12.5□□□□□ -0.41
NFRKB-202ENST00000524746 FBLN2P98095 1184 aa12.48□□□□□ -0.41
NFRKB-202ENST00000524746 ATP1B4Q9UN42 357 aaPredicted RBP12.44□□□□□ -0.42
NFRKB-202ENST00000524746 ERICH6Q7L0X2 663 aa12.4□□□□□ -0.42
NFRKB-202ENST00000524746 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
NFRKB-202ENST00000524746 ABCC8Q09428 1581 aa12.36□□□□□ -0.43
NFRKB-202ENST00000524746 NEFLP07196 543 aa12.34□□□□□ -0.43
NFRKB-202ENST00000524746 BCANQ96GW7 911 aa12.33□□□□□ -0.44
NFRKB-202ENST00000524746 BAZ1AQ9NRL2 1556 aaPredicted RBP12.29□□□□□ -0.44
NFRKB-202ENST00000524746 CCDC88BA6NC98 1476 aa12.29□□□□□ -0.44
NFRKB-202ENST00000524746 ITGAEP38570 1179 aa12.29□□□□□ -0.44
NFRKB-202ENST00000524746 CSRNP3Q8WYN3 585 aa12.28□□□□□ -0.44
NFRKB-202ENST00000524746 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.44
NFRKB-202ENST00000524746 SOGA1O94964 1423 aa12.27□□□□□ -0.45
NFRKB-202ENST00000524746 MIER1Q8N108 512 aa12.26□□□□□ -0.45
NFRKB-202ENST00000524746 RUSC2Q8N2Y8 1516 aa12.21□□□□□ -0.46
NFRKB-202ENST00000524746 SMARCA4P51532 1647 aa12.17□□□□□ -0.46
NFRKB-202ENST00000524746 P3H3Q8IVL6 736 aa12.16□□□□□ -0.46
NFRKB-202ENST00000524746 BAZ1BQ9UIG0 1483 aaKnown RBP12.15□□□□□ -0.46
NFRKB-202ENST00000524746 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
NFRKB-202ENST00000524746 WRNQ14191 1432 aaPredicted RBP eCLIP12.12□□□□□ -0.47
NFRKB-202ENST00000524746 TOP2AP11388 1531 aaKnown RBP12.1□□□□□ -0.47
NFRKB-202ENST00000524746 UNC13AQ9UPW8 1703 aa12.09□□□□□ -0.47
NFRKB-202ENST00000524746 SMARCA2P51531 1590 aa12.08□□□□□ -0.48
NFRKB-202ENST00000524746 CEP162Q5TB80 1403 aa12.07□□□□□ -0.48
NFRKB-202ENST00000524746 BICRAQ9NZM4 1560 aa12.07□□□□□ -0.48
NFRKB-202ENST00000524746 ATAD2BQ9ULI0 1458 aa12.06□□□□□ -0.48
NFRKB-202ENST00000524746 FKBP8Q14318 412 aa12.05□□□□□ -0.48
NFRKB-202ENST00000524746 ARID3CA6NKF2 412 aa12.04□□□□□ -0.48
NFRKB-202ENST00000524746 NPM1P06748 294 aaKnown RBP eCLIP12.02□□□□□ -0.48
NFRKB-202ENST00000524746 TRHP20396 242 aaPredicted RBP12.02□□□□□ -0.49
NFRKB-202ENST00000524746 CNGB1Q14028 1251 aaPredicted RBP12.01□□□□□ -0.49
NFRKB-202ENST00000524746 DNAJC5BQ9UF47 199 aa11.99□□□□□ -0.49
NFRKB-202ENST00000524746 ANP32EQ9BTT0 268 aa11.96□□□□□ -0.49
NFRKB-202ENST00000524746 CHMP7Q8WUX9 453 aaPredicted RBP11.96□□□□□ -0.49
NFRKB-202ENST00000524746 SUPT16HQ9Y5B9 1047 aaKnown RBP11.95□□□□□ -0.5
NFRKB-202ENST00000524746 CLIP1P30622 1438 aa11.94□□□□□ -0.5
NFRKB-202ENST00000524746 DDX10Q13206 875 aaKnown RBP11.92□□□□□ -0.5
NFRKB-202ENST00000524746 TRIM52Q96A61 297 aa11.92□□□□□ -0.5
NFRKB-202ENST00000524746 TNIKQ9UKE5 1360 aa11.91□□□□□ -0.5
NFRKB-202ENST00000524746 FAM50AQ14320 339 aaKnown RBP11.91□□□□□ -0.5
NFRKB-202ENST00000524746 GOLGA3Q08378 1498 aa11.91□□□□□ -0.5
NFRKB-202ENST00000524746 CDK11AQ9UQ88 783 aaPredicted RBP11.91□□□□□ -0.5
NFRKB-202ENST00000524746 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
NFRKB-202ENST00000524746 ANP32CO43423 234 aa11.9□□□□□ -0.5
NFRKB-202ENST00000524746 RAPGEF2Q9Y4G8 1499 aa11.89□□□□□ -0.51
NFRKB-202ENST00000524746 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
NFRKB-202ENST00000524746 POLR3GLQ9BT43 218 aa11.88□□□□□ -0.51
NFRKB-202ENST00000524746 SYNJ1O43426 1573 aa11.88□□□□□ -0.51
NFRKB-202ENST00000524746 PLPPR3Q6T4P5 718 aa11.88□□□□□ -0.51
NFRKB-202ENST00000524746 KANK4Q5T7N3 995 aaPredicted RBP11.87□□□□□ -0.51
NFRKB-202ENST00000524746 HIRIP3Q9BW71 556 aaPredicted RBP11.86□□□□□ -0.51
NFRKB-202ENST00000524746 EIF4G1Q04637 1599 aaKnown RBP11.84□□□□□ -0.51
NFRKB-202ENST00000524746 IRX6P78412 446 aaPredicted RBP11.84□□□□□ -0.51
NFRKB-202ENST00000524746 RTL5Q5HYW3 569 aaPredicted RBP11.83□□□□□ -0.52
NFRKB-202ENST00000524746 CEP164Q9UPV0 1460 aa11.82□□□□□ -0.52
NFRKB-202ENST00000524746 TSHZ2Q9NRE2 1034 aa11.82□□□□□ -0.52
NFRKB-202ENST00000524746 CUX2O14529 1486 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms