RNA–Protein interactions for RNA: ENST00000570308.5

MMP2-208, Transcript of matrix metallopeptidase 2, humanhuman

TSL 1 (best) BASIC

Gene MMP2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-208ENST00000570308 NISCHQ9Y2I1 1504 aa21.42■■□□□ 1.02
MMP2-208ENST00000570308 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
MMP2-208ENST00000570308 ZCCHC6Q5VYS8 1495 aaKnown RBP18.11■□□□□ 0.49
MMP2-208ENST00000570308 PELP1Q8IZL8 1130 aaKnown RBP18.01■□□□□ 0.47
MMP2-208ENST00000570308 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
MMP2-208ENST00000570308 HRCP23327 699 aa17.68■□□□□ 0.42
MMP2-208ENST00000570308 MYO15BQ96JP2 1530 aa17.64■□□□□ 0.41
MMP2-208ENST00000570308 MYT1Q01538 1121 aa17.53■□□□□ 0.4
MMP2-208ENST00000570308 NACADO15069 1562 aa17.28■□□□□ 0.36
MMP2-208ENST00000570308 SHROOM4Q9ULL8 1493 aa17.21■□□□□ 0.35
MMP2-208ENST00000570308 PPARGC1BQ86YN6 1023 aaKnown RBP17.19■□□□□ 0.34
MMP2-208ENST00000570308 PCGF6Q9BYE7 350 aa17.04■□□□□ 0.32
MMP2-208ENST00000570308 ABCC9O60706 1549 aa17.02■□□□□ 0.32
MMP2-208ENST00000570308 RB1CC1Q8TDY2 1594 aa17■□□□□ 0.31
MMP2-208ENST00000570308 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
MMP2-208ENST00000570308 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
MMP2-208ENST00000570308 SCRIBQ14160 1630 aa16.95■□□□□ 0.3
MMP2-208ENST00000570308 UNC13AQ9UPW8 1703 aa16.71■□□□□ 0.27
MMP2-208ENST00000570308 SUPT5HO00267 1087 aaKnown RBP16.68■□□□□ 0.26
MMP2-208ENST00000570308 RSF1Q96T23 1441 aaPredicted RBP16.65■□□□□ 0.26
MMP2-208ENST00000570308 TTBK1Q5TCY1 1321 aaPredicted RBP16.6■□□□□ 0.25
MMP2-208ENST00000570308 ZEB1P37275 1124 aaPredicted RBP16.54■□□□□ 0.24
MMP2-208ENST00000570308 BAZ1AQ9NRL2 1556 aaPredicted RBP16.53■□□□□ 0.24
MMP2-208ENST00000570308 BICRAQ9NZM4 1560 aa16.5■□□□□ 0.23
MMP2-208ENST00000570308 MROH2BQ7Z745 1585 aa16.48■□□□□ 0.23
MMP2-208ENST00000570308 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
MMP2-208ENST00000570308 ACIN1Q9UKV3 1341 aaKnown RBP16.46■□□□□ 0.23
MMP2-208ENST00000570308 SMARCA4P51532 1647 aa16.42■□□□□ 0.22
MMP2-208ENST00000570308 TRIM26Q12899 539 aaPredicted RBP16.4■□□□□ 0.22
MMP2-208ENST00000570308 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
MMP2-208ENST00000570308 PEG3Q9GZU2 1588 aa16.36■□□□□ 0.21
MMP2-208ENST00000570308 WIZO95785 1651 aa16.36■□□□□ 0.21
MMP2-208ENST00000570308 GTF3C3Q9Y5Q9 886 aa16.34■□□□□ 0.21
MMP2-208ENST00000570308 NEUROD1Q13562 356 aa16.33■□□□□ 0.2
MMP2-208ENST00000570308 TOP2AP11388 1531 aaKnown RBP16.31■□□□□ 0.2
MMP2-208ENST00000570308 CENPBP07199 599 aaPredicted RBP16.28■□□□□ 0.2
MMP2-208ENST00000570308 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
MMP2-208ENST00000570308 BCL11AQ9H165 835 aa16.15■□□□□ 0.18
MMP2-208ENST00000570308 SMARCA2P51531 1590 aa16.14■□□□□ 0.17
MMP2-208ENST00000570308 CCDC88BA6NC98 1476 aa16.03■□□□□ 0.16
MMP2-208ENST00000570308 ATAD2BQ9ULI0 1458 aa16.02■□□□□ 0.15
MMP2-208ENST00000570308 LOC105371045A0A1W2PR82 267 aa16.02■□□□□ 0.15
MMP2-208ENST00000570308 HMGXB3Q12766 1538 aa15.98■□□□□ 0.15
MMP2-208ENST00000570308 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
MMP2-208ENST00000570308 FAM9AQ8IZU1 332 aaPredicted RBP15.95■□□□□ 0.14
MMP2-208ENST00000570308 DIEXFQ68CQ4 756 aaKnown RBP15.9■□□□□ 0.14
MMP2-208ENST00000570308 NCAPD3P42695 1498 aa15.9■□□□□ 0.14
MMP2-208ENST00000570308 BAZ1BQ9UIG0 1483 aaKnown RBP15.89■□□□□ 0.13
MMP2-208ENST00000570308 PRKCSHP14314 528 aaPredicted RBP15.87■□□□□ 0.13
MMP2-208ENST00000570308 ANP32EQ9BTT0 268 aa15.84■□□□□ 0.13
MMP2-208ENST00000570308 TRIM41Q8WV44 630 aa15.79■□□□□ 0.12
MMP2-208ENST00000570308 PRDM2Q13029 1718 aa15.72■□□□□ 0.11
MMP2-208ENST00000570308 ABCC8Q09428 1581 aa15.7■□□□□ 0.1
MMP2-208ENST00000570308 ERICH6Q7L0X2 663 aa15.7■□□□□ 0.1
MMP2-208ENST00000570308 EEA1Q15075 1411 aa15.7■□□□□ 0.1
MMP2-208ENST00000570308 YTHDC1Q96MU7 727 aaKnown RBP15.68■□□□□ 0.1
MMP2-208ENST00000570308 BIVM-ERCC5R4GMW8 1640 aa15.65■□□□□ 0.1
MMP2-208ENST00000570308 CCER1Q8TC90 406 aaPredicted RBP15.65■□□□□ 0.1
MMP2-208ENST00000570308 WRNQ14191 1432 aaPredicted RBP eCLIP15.62■□□□□ 0.09
MMP2-208ENST00000570308 CSRNP3Q8WYN3 585 aa15.62■□□□□ 0.09
MMP2-208ENST00000570308 TOP2BQ02880 1626 aa15.61■□□□□ 0.09
MMP2-208ENST00000570308 SYNJ1O43426 1573 aa15.61■□□□□ 0.09
MMP2-208ENST00000570308 CFTRP13569 1480 aa15.61■□□□□ 0.09
MMP2-208ENST00000570308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.58■□□□□ 0.09
MMP2-208ENST00000570308 CC2D2AQ9P2K1 1620 aa15.58■□□□□ 0.08
MMP2-208ENST00000570308 KIF21BO75037 1637 aa15.51■□□□□ 0.07
MMP2-208ENST00000570308 CLSPNQ9HAW4 1339 aa15.51■□□□□ 0.07
MMP2-208ENST00000570308 TSHZ2Q9NRE2 1034 aa15.48■□□□□ 0.07
MMP2-208ENST00000570308 ZNF316A6NFI3 1004 aaPredicted RBP15.47■□□□□ 0.07
MMP2-208ENST00000570308 SOGA1O94964 1423 aa15.45■□□□□ 0.06
MMP2-208ENST00000570308 CUX1P39880 1505 aa15.42■□□□□ 0.06
MMP2-208ENST00000570308 SUPT16HQ9Y5B9 1047 aaKnown RBP15.41■□□□□ 0.06
MMP2-208ENST00000570308 TNIKQ9UKE5 1360 aa15.41■□□□□ 0.06
MMP2-208ENST00000570308 CADPSQ9ULU8 1353 aa15.41■□□□□ 0.06
MMP2-208ENST00000570308 APLP2Q06481 763 aa15.41■□□□□ 0.06
MMP2-208ENST00000570308 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
MMP2-208ENST00000570308 MIER1Q8N108 512 aa15.39■□□□□ 0.05
MMP2-208ENST00000570308 CEP164Q9UPV0 1460 aa15.38■□□□□ 0.05
MMP2-208ENST00000570308 RUSC2Q8N2Y8 1516 aa15.36■□□□□ 0.05
MMP2-208ENST00000570308 ERICH3Q5RHP9 1530 aa15.36■□□□□ 0.05
MMP2-208ENST00000570308 LAMC3Q9Y6N6 1575 aa15.34■□□□□ 0.05
MMP2-208ENST00000570308 PRXQ9BXM0 1461 aa15.28■□□□□ 0.04
MMP2-208ENST00000570308 CEP162Q5TB80 1403 aa15.27■□□□□ 0.03
MMP2-208ENST00000570308 DNMBPQ6XZF7 1577 aa15.26■□□□□ 0.03
MMP2-208ENST00000570308 FANCD2Q9BXW9 1451 aa15.22■□□□□ 0.03
MMP2-208ENST00000570308 KIF27Q86VH2 1401 aa15.21■□□□□ 0.03
MMP2-208ENST00000570308 WDR97A6NE52 1622 aa15.17■□□□□ 0.02
MMP2-208ENST00000570308 RAPGEF2Q9Y4G8 1499 aa15.16■□□□□ 0.02
MMP2-208ENST00000570308 FGD5Q6ZNL6 1462 aa15.15■□□□□ 0.02
MMP2-208ENST00000570308 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
MMP2-208ENST00000570308 ABCA10Q8WWZ4 1543 aa15.14■□□□□ 0.01
MMP2-208ENST00000570308 TOPBP1Q92547 1522 aa15.14■□□□□ 0.01
MMP2-208ENST00000570308 RBM19Q9Y4C8 960 aaKnown RBP15.09■□□□□ 0.01
MMP2-208ENST00000570308 PDS5BQ9NTI5 1447 aa15.08■□□□□ 0.01
MMP2-208ENST00000570308 CUL7Q14999 1698 aa15.07■□□□□ 0
MMP2-208ENST00000570308 MYT1LQ9UL68 1186 aa15.07■□□□□ 0
MMP2-208ENST00000570308 NESP48681 1621 aa15.07■□□□□ 0
MMP2-208ENST00000570308 CLIP1P30622 1438 aa15.07■□□□□ 0
MMP2-208ENST00000570308 POLA1P09884 1462 aaPredicted RBP15.06■□□□□ 0
MMP2-208ENST00000570308 VPS8Q8N3P4 1428 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms