RNA–Protein interactions for RNA: ENST00000324306.10

ZKSCAN1-201, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN1, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-201ENST00000324306 PELP1Q8IZL8 1130 aaKnown RBP15.51■□□□□ 0.07
ZKSCAN1-201ENST00000324306 MYT1Q01538 1121 aa15.24■□□□□ 0.03
ZKSCAN1-201ENST00000324306 DCAF8L2P0C7V8 631 aa14.87□□□□□ -0.03
ZKSCAN1-201ENST00000324306 NISCHQ9Y2I1 1504 aa14.87□□□□□ -0.03
ZKSCAN1-201ENST00000324306 CCER1Q8TC90 406 aaPredicted RBP14.7□□□□□ -0.06
ZKSCAN1-201ENST00000324306 CENPBP07199 599 aaPredicted RBP14.7□□□□□ -0.06
ZKSCAN1-201ENST00000324306 ZEB1P37275 1124 aaPredicted RBP14.67□□□□□ -0.06
ZKSCAN1-201ENST00000324306 SUPT5HO00267 1087 aaKnown RBP14.66□□□□□ -0.06
ZKSCAN1-201ENST00000324306 ERICH6Q7L0X2 663 aa14.56□□□□□ -0.08
ZKSCAN1-201ENST00000324306 APLP2Q06481 763 aa14.43□□□□□ -0.1
ZKSCAN1-201ENST00000324306 PCGF6Q9BYE7 350 aa14.27□□□□□ -0.13
ZKSCAN1-201ENST00000324306 SHROOM4Q9ULL8 1493 aa14.25□□□□□ -0.13
ZKSCAN1-201ENST00000324306 NEFLP07196 543 aa14.23□□□□□ -0.13
ZKSCAN1-201ENST00000324306 YTHDC1Q96MU7 727 aaKnown RBP14.17□□□□□ -0.14
ZKSCAN1-201ENST00000324306 FAM9AQ8IZU1 332 aaPredicted RBP14.08□□□□□ -0.16
ZKSCAN1-201ENST00000324306 TTBK1Q5TCY1 1321 aaPredicted RBP14.03□□□□□ -0.16
ZKSCAN1-201ENST00000324306 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
ZKSCAN1-201ENST00000324306 HRCP23327 699 aa13.91□□□□□ -0.18
ZKSCAN1-201ENST00000324306 TRIM26Q12899 539 aaPredicted RBP13.86□□□□□ -0.19
ZKSCAN1-201ENST00000324306 DAXXQ9UER7 740 aaPredicted RBP13.86□□□□□ -0.19
ZKSCAN1-201ENST00000324306 TRIM41Q8WV44 630 aa13.79□□□□□ -0.2
ZKSCAN1-201ENST00000324306 RTL5Q5HYW3 569 aaPredicted RBP13.72□□□□□ -0.21
ZKSCAN1-201ENST00000324306 UBTFP17480 764 aaKnown RBP13.56□□□□□ -0.24
ZKSCAN1-201ENST00000324306 CLSPNQ9HAW4 1339 aa13.54□□□□□ -0.24
ZKSCAN1-201ENST00000324306 ZNF316A6NFI3 1004 aaPredicted RBP13.54□□□□□ -0.24
ZKSCAN1-201ENST00000324306 MYT1LQ9UL68 1186 aa13.45□□□□□ -0.26
ZKSCAN1-201ENST00000324306 DIEXFQ68CQ4 756 aaKnown RBP13.45□□□□□ -0.26
ZKSCAN1-201ENST00000324306 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.28
ZKSCAN1-201ENST00000324306 RANGAP1P46060 587 aaPredicted RBP13.32□□□□□ -0.28
ZKSCAN1-201ENST00000324306 GLIPR1L2Q4G1C9 344 aa13.31□□□□□ -0.28
ZKSCAN1-201ENST00000324306 CDK11AQ9UQ88 783 aaPredicted RBP13.3□□□□□ -0.28
ZKSCAN1-201ENST00000324306 GTF3C3Q9Y5Q9 886 aa13.27□□□□□ -0.29
ZKSCAN1-201ENST00000324306 CHIC1Q5VXU3 224 aa13.2□□□□□ -0.3
ZKSCAN1-201ENST00000324306 ACIN1Q9UKV3 1341 aaKnown RBP13.2□□□□□ -0.3
ZKSCAN1-201ENST00000324306 ANP32AP39687 249 aaKnown RBP13.18□□□□□ -0.3
ZKSCAN1-201ENST00000324306 PPARGC1BQ86YN6 1023 aaKnown RBP13.16□□□□□ -0.3
ZKSCAN1-201ENST00000324306 ANP32CO43423 234 aa13.12□□□□□ -0.31
ZKSCAN1-201ENST00000324306 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.32
ZKSCAN1-201ENST00000324306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.08□□□□□ -0.32
ZKSCAN1-201ENST00000324306 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
ZKSCAN1-201ENST00000324306 ANP32BQ92688 251 aaKnown RBP13.06□□□□□ -0.32
ZKSCAN1-201ENST00000324306 POLR3GLQ9BT43 218 aa13.05□□□□□ -0.32
ZKSCAN1-201ENST00000324306 ITGAEP38570 1179 aa13□□□□□ -0.33
ZKSCAN1-201ENST00000324306 LOC105371045A0A1W2PR82 267 aa12.99□□□□□ -0.33
ZKSCAN1-201ENST00000324306 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
ZKSCAN1-201ENST00000324306 BCANQ96GW7 911 aa12.96□□□□□ -0.34
ZKSCAN1-201ENST00000324306 CCDC180Q9P1Z9 1646 aa12.94□□□□□ -0.34
ZKSCAN1-201ENST00000324306 EIF5BO60841 1220 aaKnown RBP12.91□□□□□ -0.34
ZKSCAN1-201ENST00000324306 CANXP27824 592 aaKnown RBP12.87□□□□□ -0.35
ZKSCAN1-201ENST00000324306 UPF2Q9HAU5 1272 aaKnown RBP12.86□□□□□ -0.35
ZKSCAN1-201ENST00000324306 FAM50AQ14320 339 aaKnown RBP12.81□□□□□ -0.36
ZKSCAN1-201ENST00000324306 ANP32EQ9BTT0 268 aa12.81□□□□□ -0.36
ZKSCAN1-201ENST00000324306 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
ZKSCAN1-201ENST00000324306 NEFMP07197 916 aa12.76□□□□□ -0.37
ZKSCAN1-201ENST00000324306 TRIM52Q96A61 297 aa12.75□□□□□ -0.37
ZKSCAN1-201ENST00000324306 NEUROD1Q13562 356 aa12.75□□□□□ -0.37
ZKSCAN1-201ENST00000324306 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
ZKSCAN1-201ENST00000324306 FKBP8Q14318 412 aa12.74□□□□□ -0.37
ZKSCAN1-201ENST00000324306 DDRGK1Q96HY6 314 aa12.73□□□□□ -0.37
ZKSCAN1-201ENST00000324306 TNNT2P45379 298 aaPredicted RBP12.72□□□□□ -0.37
ZKSCAN1-201ENST00000324306 CNGB1Q14028 1251 aaPredicted RBP12.71□□□□□ -0.37
ZKSCAN1-201ENST00000324306 NPM2Q86SE8 214 aaKnown RBP12.7□□□□□ -0.38
ZKSCAN1-201ENST00000324306 SCAF1Q9H7N4 1312 aaKnown RBP12.68□□□□□ -0.38
ZKSCAN1-201ENST00000324306 TONSLQ96HA7 1378 aa12.66□□□□□ -0.38
ZKSCAN1-201ENST00000324306 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.66□□□□□ -0.38
ZKSCAN1-201ENST00000324306 BECN1Q14457 450 aa12.64□□□□□ -0.39
ZKSCAN1-201ENST00000324306 CCDC136Q96JN2 1154 aa12.62□□□□□ -0.39
ZKSCAN1-201ENST00000324306 ERICH6BQ5W0A0 696 aa12.62□□□□□ -0.39
ZKSCAN1-201ENST00000324306 NBR1Q14596 966 aa12.6□□□□□ -0.39
ZKSCAN1-201ENST00000324306 TRIM44Q96DX7 344 aaPredicted RBP12.59□□□□□ -0.39
ZKSCAN1-201ENST00000324306 HNRNPUQ00839 825 aaKnown RBP eCLIP12.59□□□□□ -0.39
ZKSCAN1-201ENST00000324306 ZNF326Q5BKZ1 582 aaKnown RBP12.57□□□□□ -0.4
ZKSCAN1-201ENST00000324306 PPM1GO15355 546 aaPredicted RBP12.56□□□□□ -0.4
ZKSCAN1-201ENST00000324306 GOLGA6L22H0YM25 854 aa12.55□□□□□ -0.4
ZKSCAN1-201ENST00000324306 NCLP19338 710 aaKnown RBP12.52□□□□□ -0.41
ZKSCAN1-201ENST00000324306 CSRNP3Q8WYN3 585 aa12.45□□□□□ -0.42
ZKSCAN1-201ENST00000324306 MYH16Q9H6N6 1097 aa12.45□□□□□ -0.42
ZKSCAN1-201ENST00000324306 EEA1Q15075 1411 aa12.44□□□□□ -0.42
ZKSCAN1-201ENST00000324306 NOP58Q9Y2X3 529 aaKnown RBP12.42□□□□□ -0.42
ZKSCAN1-201ENST00000324306 ZCCHC6Q5VYS8 1495 aaKnown RBP12.42□□□□□ -0.42
ZKSCAN1-201ENST00000324306 TMC1Q8TDI8 760 aa12.42□□□□□ -0.42
ZKSCAN1-201ENST00000324306 CDK11BP21127 795 aaKnown RBP12.41□□□□□ -0.42
ZKSCAN1-201ENST00000324306 BCL11AQ9H165 835 aa12.41□□□□□ -0.42
ZKSCAN1-201ENST00000324306 FAM9BQ8IZU0 186 aa12.4□□□□□ -0.42
ZKSCAN1-201ENST00000324306 MRS2Q9HD23 443 aa12.39□□□□□ -0.43
ZKSCAN1-201ENST00000324306 L1TD1Q5T7N2 865 aaKnown RBP12.39□□□□□ -0.43
ZKSCAN1-201ENST00000324306 WDR43Q15061 677 aaKnown RBP eCLIP12.39□□□□□ -0.433e-6■■■■■ 38.4
ZKSCAN1-201ENST00000324306 DDX10Q13206 875 aaKnown RBP12.38□□□□□ -0.43
ZKSCAN1-201ENST00000324306 MIER1Q8N108 512 aa12.37□□□□□ -0.43
ZKSCAN1-201ENST00000324306 NAP1L5Q96NT1 182 aaPredicted RBP12.37□□□□□ -0.43
ZKSCAN1-201ENST00000324306 GOLGA6L6A8MZA4 724 aa12.36□□□□□ -0.43
ZKSCAN1-201ENST00000324306 CASC1Q6TDU7 716 aa12.35□□□□□ -0.43
ZKSCAN1-201ENST00000324306 PPP4R2Q9NY27 417 aa12.34□□□□□ -0.43
ZKSCAN1-201ENST00000324306 PTMAP06454 111 aaKnown RBP12.34□□□□□ -0.43
ZKSCAN1-201ENST00000324306 PTMSP20962 102 aa12.34□□□□□ -0.43
ZKSCAN1-201ENST00000324306 SCRIBQ14160 1630 aa12.33□□□□□ -0.44
ZKSCAN1-201ENST00000324306 CHAF1AQ13111 956 aaPredicted RBP12.33□□□□□ -0.44
ZKSCAN1-201ENST00000324306 GOLGA3Q08378 1498 aa12.33□□□□□ -0.44
ZKSCAN1-201ENST00000324306 CLIP1P30622 1438 aa12.31□□□□□ -0.44
ZKSCAN1-201ENST00000324306 ARXQ96QS3 562 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms