RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 NISCHQ9Y2I1 1504 aa18.12■□□□□ 0.49
NLRP3-201ENST00000336119 DCAF8L2P0C7V8 631 aa16.23■□□□□ 0.19
NLRP3-201ENST00000336119 SHROOM4Q9ULL8 1493 aa15.97■□□□□ 0.15
NLRP3-201ENST00000336119 SUPT5HO00267 1087 aaKnown RBP15.88■□□□□ 0.13
NLRP3-201ENST00000336119 ABCC9O60706 1549 aa15.58■□□□□ 0.08
NLRP3-201ENST00000336119 CCDC180Q9P1Z9 1646 aa15.37■□□□□ 0.05
NLRP3-201ENST00000336119 ZCCHC6Q5VYS8 1495 aaKnown RBP15.19■□□□□ 0.02
NLRP3-201ENST00000336119 CHIC1Q5VXU3 224 aa14.96□□□□□ -0.01
NLRP3-201ENST00000336119 PABPN1Q86U42 306 aaKnown RBP eCLIP14.86□□□□□ -0.03
NLRP3-201ENST00000336119 TRIM41Q8WV44 630 aa14.83□□□□□ -0.04
NLRP3-201ENST00000336119 RB1CC1Q8TDY2 1594 aa14.78□□□□□ -0.04
NLRP3-201ENST00000336119 FAM9AQ8IZU1 332 aaPredicted RBP14.77□□□□□ -0.05
NLRP3-201ENST00000336119 PCGF6Q9BYE7 350 aa14.76□□□□□ -0.05
NLRP3-201ENST00000336119 EHMT2Q96KQ7 1210 aa14.74□□□□□ -0.05
NLRP3-201ENST00000336119 DCAF1Q9Y4B6 1507 aa14.71□□□□□ -0.05
NLRP3-201ENST00000336119 NACADO15069 1562 aa14.7□□□□□ -0.06
NLRP3-201ENST00000336119 LOC105371045A0A1W2PR82 267 aa14.61□□□□□ -0.07
NLRP3-201ENST00000336119 SCRIBQ14160 1630 aa14.56□□□□□ -0.08
NLRP3-201ENST00000336119 TRIM26Q12899 539 aaPredicted RBP14.46□□□□□ -0.1
NLRP3-201ENST00000336119 HRCP23327 699 aa14.45□□□□□ -0.1
NLRP3-201ENST00000336119 MYO15BQ96JP2 1530 aa14.41□□□□□ -0.1
NLRP3-201ENST00000336119 ZEB1P37275 1124 aaPredicted RBP14.4□□□□□ -0.1
NLRP3-201ENST00000336119 RSF1Q96T23 1441 aaPredicted RBP14.37□□□□□ -0.11
NLRP3-201ENST00000336119 APLP2Q06481 763 aa14.33□□□□□ -0.12
NLRP3-201ENST00000336119 UBTFP17480 764 aaKnown RBP14.32□□□□□ -0.12
NLRP3-201ENST00000336119 TTBK1Q5TCY1 1321 aaPredicted RBP14.24□□□□□ -0.13
NLRP3-201ENST00000336119 PPARGC1BQ86YN6 1023 aaKnown RBP14.19□□□□□ -0.14
NLRP3-201ENST00000336119 CCER1Q8TC90 406 aaPredicted RBP14.17□□□□□ -0.14
NLRP3-201ENST00000336119 CECR2Q9BXF3 1484 aa14.13□□□□□ -0.15
NLRP3-201ENST00000336119 RANGAP1P46060 587 aaPredicted RBP14.12□□□□□ -0.15
NLRP3-201ENST00000336119 BAZ1AQ9NRL2 1556 aaPredicted RBP14.06□□□□□ -0.16
NLRP3-201ENST00000336119 MROH2BQ7Z745 1585 aa14.03□□□□□ -0.16
NLRP3-201ENST00000336119 CSRNP3Q8WYN3 585 aa14.01□□□□□ -0.17
NLRP3-201ENST00000336119 DNAJC5BQ9UF47 199 aa13.96□□□□□ -0.17
NLRP3-201ENST00000336119 BICRAQ9NZM4 1560 aa13.91□□□□□ -0.18
NLRP3-201ENST00000336119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.88□□□□□ -0.19
NLRP3-201ENST00000336119 WIZO95785 1651 aa13.87□□□□□ -0.19
NLRP3-201ENST00000336119 EEA1Q15075 1411 aa13.83□□□□□ -0.19
NLRP3-201ENST00000336119 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
NLRP3-201ENST00000336119 ATP1B4Q9UN42 357 aaPredicted RBP13.82□□□□□ -0.2
NLRP3-201ENST00000336119 EIF4G1Q04637 1599 aaKnown RBP13.81□□□□□ -0.2
NLRP3-201ENST00000336119 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
NLRP3-201ENST00000336119 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
NLRP3-201ENST00000336119 CENPBP07199 599 aaPredicted RBP13.79□□□□□ -0.2
NLRP3-201ENST00000336119 TOP2AP11388 1531 aaKnown RBP13.79□□□□□ -0.2
NLRP3-201ENST00000336119 UNC13AQ9UPW8 1703 aa13.79□□□□□ -0.2
NLRP3-201ENST00000336119 WRNQ14191 1432 aaPredicted RBP eCLIP13.77□□□□□ -0.21
NLRP3-201ENST00000336119 SMARCA4P51532 1647 aa13.74□□□□□ -0.21
NLRP3-201ENST00000336119 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
NLRP3-201ENST00000336119 CC2D2AQ9P2K1 1620 aa13.72□□□□□ -0.21
NLRP3-201ENST00000336119 TNIKQ9UKE5 1360 aa13.72□□□□□ -0.21
NLRP3-201ENST00000336119 CEP162Q5TB80 1403 aa13.7□□□□□ -0.22
NLRP3-201ENST00000336119 GOLGA3Q08378 1498 aa13.69□□□□□ -0.22
NLRP3-201ENST00000336119 ATAD2BQ9ULI0 1458 aa13.69□□□□□ -0.22
NLRP3-201ENST00000336119 ABCC8Q09428 1581 aa13.67□□□□□ -0.22
NLRP3-201ENST00000336119 SOGA1O94964 1423 aa13.66□□□□□ -0.22
NLRP3-201ENST00000336119 ERCC6Q03468 1493 aa13.65□□□□□ -0.22
NLRP3-201ENST00000336119 ITGAEP38570 1179 aa13.64□□□□□ -0.23
NLRP3-201ENST00000336119 DIEXFQ68CQ4 756 aaKnown RBP13.63□□□□□ -0.23
NLRP3-201ENST00000336119 CLIP1P30622 1438 aa13.62□□□□□ -0.23
NLRP3-201ENST00000336119 CEP164Q9UPV0 1460 aa13.62□□□□□ -0.23
NLRP3-201ENST00000336119 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
NLRP3-201ENST00000336119 YTHDC1Q96MU7 727 aaKnown RBP13.52□□□□□ -0.25
NLRP3-201ENST00000336119 ZNF316A6NFI3 1004 aaPredicted RBP13.51□□□□□ -0.25
NLRP3-201ENST00000336119 PELP1Q8IZL8 1130 aaKnown RBP13.51□□□□□ -0.25
NLRP3-201ENST00000336119 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
NLRP3-201ENST00000336119 PDS5BQ9NTI5 1447 aa13.49□□□□□ -0.25
NLRP3-201ENST00000336119 FAM50AQ14320 339 aaKnown RBP13.48□□□□□ -0.25
NLRP3-201ENST00000336119 CADPSQ9ULU8 1353 aa13.47□□□□□ -0.25
NLRP3-201ENST00000336119 P3H3Q8IVL6 736 aa13.44□□□□□ -0.26
NLRP3-201ENST00000336119 RUSC2Q8N2Y8 1516 aa13.43□□□□□ -0.26
NLRP3-201ENST00000336119 HMGXB3Q12766 1538 aa13.41□□□□□ -0.26
NLRP3-201ENST00000336119 FBLN2P98095 1184 aa13.4□□□□□ -0.26
NLRP3-201ENST00000336119 VPS8Q8N3P4 1428 aa13.39□□□□□ -0.27
NLRP3-201ENST00000336119 NESP48681 1621 aa13.32□□□□□ -0.28
NLRP3-201ENST00000336119 CUX2O14529 1486 aa13.31□□□□□ -0.28
NLRP3-201ENST00000336119 RAPGEF2Q9Y4G8 1499 aa13.31□□□□□ -0.28
NLRP3-201ENST00000336119 ACIN1Q9UKV3 1341 aaKnown RBP13.31□□□□□ -0.28
NLRP3-201ENST00000336119 NEUROD1Q13562 356 aa13.3□□□□□ -0.28
NLRP3-201ENST00000336119 CARMIL1Q5VZK9 1371 aa13.29□□□□□ -0.28
NLRP3-201ENST00000336119 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
NLRP3-201ENST00000336119 PEG3Q9GZU2 1588 aa13.27□□□□□ -0.29
NLRP3-201ENST00000336119 SYNJ1O43426 1573 aa13.25□□□□□ -0.29
NLRP3-201ENST00000336119 GTF3C3Q9Y5Q9 886 aa13.24□□□□□ -0.29
NLRP3-201ENST00000336119 CLSPNQ9HAW4 1339 aa13.23□□□□□ -0.29
NLRP3-201ENST00000336119 TRIM52Q96A61 297 aa13.21□□□□□ -0.29
NLRP3-201ENST00000336119 KIF21BO75037 1637 aa13.21□□□□□ -0.29
NLRP3-201ENST00000336119 KANK4Q5T7N3 995 aaPredicted RBP13.2□□□□□ -0.3
NLRP3-201ENST00000336119 FHAD1B1AJZ9 1412 aa13.19□□□□□ -0.3
NLRP3-201ENST00000336119 NEFLP07196 543 aa13.19□□□□□ -0.3
NLRP3-201ENST00000336119 MTUS2Q5JR59 1369 aa13.18□□□□□ -0.3
NLRP3-201ENST00000336119 CCNB3Q8WWL7 1395 aa13.18□□□□□ -0.3
NLRP3-201ENST00000336119 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
NLRP3-201ENST00000336119 CFTRP13569 1480 aa13.18□□□□□ -0.3
NLRP3-201ENST00000336119 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
NLRP3-201ENST00000336119 TOP2BQ02880 1626 aa13.15□□□□□ -0.3
NLRP3-201ENST00000336119 CDK11AQ9UQ88 783 aaPredicted RBP13.14□□□□□ -0.31
NLRP3-201ENST00000336119 ARID3CA6NKF2 412 aa13.13□□□□□ -0.31
NLRP3-201ENST00000336119 MIER1Q8N108 512 aa13.13□□□□□ -0.31
NLRP3-201ENST00000336119 MRC2Q9UBG0 1479 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms