RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 AEBP2Q6ZN18 517 aaPredicted RBP9.01□□□□□ -0.97
CCDC178-213ENST00000583930 CHIC1Q5VXU3 224 aa8.89□□□□□ -0.99
CCDC178-213ENST00000583930 PHF23Q9BUL5 403 aaPredicted RBP8□□□□□ -1.13
CCDC178-213ENST00000583930 POTEDQ86YR6 584 aa7.82□□□□□ -1.16
CCDC178-213ENST00000583930 NISCHQ9Y2I1 1504 aa7.8□□□□□ -1.16
CCDC178-213ENST00000583930 SENP3Q9H4L4 574 aaPredicted RBP7.53□□□□□ -1.2
CCDC178-213ENST00000583930 PLPPR3Q6T4P5 718 aa7.3□□□□□ -1.24
CCDC178-213ENST00000583930 CCDC180Q9P1Z9 1646 aa7.22□□□□□ -1.25
CCDC178-213ENST00000583930 ADRA2BP18089 450 aa7.12□□□□□ -1.27
CCDC178-213ENST00000583930 FOXD1Q16676 465 aa7.07□□□□□ -1.28
CCDC178-213ENST00000583930 PPP6R1Q9UPN7 881 aa7.04□□□□□ -1.28
CCDC178-213ENST00000583930 KCNA4P22459 653 aa6.86□□□□□ -1.31
CCDC178-213ENST00000583930 EHMT2Q96KQ7 1210 aa6.83□□□□□ -1.32
CCDC178-213ENST00000583930 MYO15BQ96JP2 1530 aa6.82□□□□□ -1.32
CCDC178-213ENST00000583930 MSH5O43196 834 aa6.8□□□□□ -1.32
CCDC178-213ENST00000583930 DCAF1Q9Y4B6 1507 aa6.77□□□□□ -1.33
CCDC178-213ENST00000583930 PIAS4Q8N2W9 510 aaPredicted RBP6.63□□□□□ -1.35
CCDC178-213ENST00000583930 ZCCHC6Q5VYS8 1495 aaKnown RBP6.59□□□□□ -1.35
CCDC178-213ENST00000583930 NACADO15069 1562 aa6.59□□□□□ -1.35
CCDC178-213ENST00000583930 SHROOM4Q9ULL8 1493 aa6.57□□□□□ -1.36
CCDC178-213ENST00000583930 PPP4R3CPQ6ZMV5 832 aa6.56□□□□□ -1.36
CCDC178-213ENST00000583930 CSRNP3Q8WYN3 585 aa6.5□□□□□ -1.37
CCDC178-213ENST00000583930 RB1CC1Q8TDY2 1594 aa6.49□□□□□ -1.37
CCDC178-213ENST00000583930 SLC4A1APQ9BWU0 796 aaKnown RBP6.48□□□□□ -1.37
CCDC178-213ENST00000583930 UNC13AQ9UPW8 1703 aa6.46□□□□□ -1.37
CCDC178-213ENST00000583930 NPM3O75607 178 aaKnown RBP6.41□□□□□ -1.38
CCDC178-213ENST00000583930 ZBTB22O15209 634 aa6.36□□□□□ -1.39
CCDC178-213ENST00000583930 MAPK8IP2Q13387 824 aaPredicted RBP6.35□□□□□ -1.39
CCDC178-213ENST00000583930 BICRAQ9NZM4 1560 aa6.32□□□□□ -1.4
CCDC178-213ENST00000583930 NCBP3Q53F19 620 aaKnown RBP6.3□□□□□ -1.4
CCDC178-213ENST00000583930 ABCC9O60706 1549 aa6.26□□□□□ -1.41
CCDC178-213ENST00000583930 PEG3Q9GZU2 1588 aa6.24□□□□□ -1.41
CCDC178-213ENST00000583930 CNKSR2Q8WXI2 1034 aa6.21□□□□□ -1.42
CCDC178-213ENST00000583930 CACNB1Q02641 598 aaPredicted RBP6.16□□□□□ -1.42
CCDC178-213ENST00000583930 SMARCA2P51531 1590 aa6.15□□□□□ -1.43
CCDC178-213ENST00000583930 SCAF1Q9H7N4 1312 aaKnown RBP6.12□□□□□ -1.43
CCDC178-213ENST00000583930 HMGXB3Q12766 1538 aa6.1□□□□□ -1.43
CCDC178-213ENST00000583930 SCRIBQ14160 1630 aa6.1□□□□□ -1.43
CCDC178-213ENST00000583930 PRDM2Q13029 1718 aa6.07□□□□□ -1.44
CCDC178-213ENST00000583930 SMARCA4P51532 1647 aa6.07□□□□□ -1.44
CCDC178-213ENST00000583930 BAZ1AQ9NRL2 1556 aaPredicted RBP6.06□□□□□ -1.44
CCDC178-213ENST00000583930 FOXD4L1Q9NU39 408 aa6.06□□□□□ -1.44
CCDC178-213ENST00000583930 EIF4G1Q04637 1599 aaKnown RBP6.05□□□□□ -1.44
CCDC178-213ENST00000583930 SLC4A2P04920 1241 aa6.02□□□□□ -1.45
CCDC178-213ENST00000583930 RNF216Q9NWF9 866 aaPredicted RBP6□□□□□ -1.45
CCDC178-213ENST00000583930 NCAPD3P42695 1498 aa5.99□□□□□ -1.45
CCDC178-213ENST00000583930 CC2D2AQ9P2K1 1620 aa5.96□□□□□ -1.46
CCDC178-213ENST00000583930 TOP2AP11388 1531 aaKnown RBP5.95□□□□□ -1.46
CCDC178-213ENST00000583930 DMRT2Q9Y5R5 561 aa5.94□□□□□ -1.46
CCDC178-213ENST00000583930 RTN4Q9NQC3 1192 aaKnown RBP5.93□□□□□ -1.46
CCDC178-213ENST00000583930 HOXD11P31277 338 aaPredicted RBP5.91□□□□□ -1.46
CCDC178-213ENST00000583930 ATAD2BQ9ULI0 1458 aa5.9□□□□□ -1.46
CCDC178-213ENST00000583930 MROH2BQ7Z745 1585 aa5.88□□□□□ -1.47
CCDC178-213ENST00000583930 DCAF8L1A6NGE4 600 aa5.88□□□□□ -1.47
CCDC178-213ENST00000583930 WDR97A6NE52 1622 aa5.88□□□□□ -1.47
CCDC178-213ENST00000583930 LAMC3Q9Y6N6 1575 aa5.88□□□□□ -1.47
CCDC178-213ENST00000583930 ATF5Q9Y2D1 282 aaPredicted RBP5.87□□□□□ -1.47
CCDC178-213ENST00000583930 FKBP8Q14318 412 aa5.87□□□□□ -1.47
CCDC178-213ENST00000583930 POTEHQ6S545 545 aa5.87□□□□□ -1.47
CCDC178-213ENST00000583930 RSF1Q96T23 1441 aaPredicted RBP5.84□□□□□ -1.47
CCDC178-213ENST00000583930 DNAJC5BQ9UF47 199 aa5.84□□□□□ -1.47
CCDC178-213ENST00000583930 WIZO95785 1651 aa5.84□□□□□ -1.47
CCDC178-213ENST00000583930 CECR2Q9BXF3 1484 aa5.83□□□□□ -1.48
CCDC178-213ENST00000583930 BAZ1BQ9UIG0 1483 aaKnown RBP5.79□□□□□ -1.48
CCDC178-213ENST00000583930 MYCNP04198 464 aaPredicted RBP5.79□□□□□ -1.48
CCDC178-213ENST00000583930 THOC2Q8NI27 1593 aaKnown RBP5.78□□□□□ -1.48
CCDC178-213ENST00000583930 BIVM-ERCC5R4GMW8 1640 aa5.77□□□□□ -1.49
CCDC178-213ENST00000583930 CFTRP13569 1480 aa5.77□□□□□ -1.49
CCDC178-213ENST00000583930 WDR62O43379 1518 aa5.75□□□□□ -1.49
CCDC178-213ENST00000583930 RNF39Q9H2S5 420 aa5.74□□□□□ -1.49
CCDC178-213ENST00000583930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.73□□□□□ -1.49
CCDC178-213ENST00000583930 KIF21AQ7Z4S6 1674 aa5.72□□□□□ -1.49
CCDC178-213ENST00000583930 SLC24A1O60721 1099 aa5.71□□□□□ -1.49
CCDC178-213ENST00000583930 ABCC8Q09428 1581 aa5.71□□□□□ -1.49
CCDC178-213ENST00000583930 U3KPZ7 1027 aaPredicted RBP5.7□□□□□ -1.5
CCDC178-213ENST00000583930 CUX2O14529 1486 aa5.7□□□□□ -1.5
CCDC178-213ENST00000583930 CCDC88BA6NC98 1476 aa5.68□□□□□ -1.5
CCDC178-213ENST00000583930 DNMBPQ6XZF7 1577 aa5.68□□□□□ -1.5
CCDC178-213ENST00000583930 AMER1Q5JTC6 1135 aaPredicted RBP5.67□□□□□ -1.5
CCDC178-213ENST00000583930 TOP2BQ02880 1626 aa5.67□□□□□ -1.5
CCDC178-213ENST00000583930 ATXN8OSP0DMR3 200 aa5.66□□□□□ -1.5
CCDC178-213ENST00000583930 TARBP1Q13395 1621 aaKnown RBP5.65□□□□□ -1.5
CCDC178-213ENST00000583930 CADPSQ9ULU8 1353 aa5.65□□□□□ -1.51
CCDC178-213ENST00000583930 C1QBPQ07021 282 aaKnown RBP5.64□□□□□ -1.51
CCDC178-213ENST00000583930 PABPN1Q86U42 306 aaKnown RBP eCLIP5.63□□□□□ -1.51
CCDC178-213ENST00000583930 ABCA5Q8WWZ7 1642 aa5.63□□□□□ -1.51
CCDC178-213ENST00000583930 MRC2Q9UBG0 1479 aa5.63□□□□□ -1.51
CCDC178-213ENST00000583930 PDS5BQ9NTI5 1447 aa5.62□□□□□ -1.51
CCDC178-213ENST00000583930 PBRM1Q86U86 1689 aa5.59□□□□□ -1.52
CCDC178-213ENST00000583930 CEP164Q9UPV0 1460 aa5.58□□□□□ -1.52
CCDC178-213ENST00000583930 CUL7Q14999 1698 aa5.57□□□□□ -1.52
CCDC178-213ENST00000583930 FANCD2Q9BXW9 1451 aa5.57□□□□□ -1.52
CCDC178-213ENST00000583930 URB2Q14146 1524 aaKnown RBP5.57□□□□□ -1.52
CCDC178-213ENST00000583930 SPINK5Q9NQ38 1064 aaPredicted RBP5.56□□□□□ -1.52
CCDC178-213ENST00000583930 CUX1P39880 1505 aa5.56□□□□□ -1.52
CCDC178-213ENST00000583930 ABCA10Q8WWZ4 1543 aa5.56□□□□□ -1.52
CCDC178-213ENST00000583930 TOPBP1Q92547 1522 aa5.56□□□□□ -1.52
CCDC178-213ENST00000583930 ZNF219Q9P2Y4 722 aaPredicted RBP5.56□□□□□ -1.52
CCDC178-213ENST00000583930 DCAF8L2P0C7V8 631 aa5.56□□□□□ -1.52
CCDC178-213ENST00000583930 MKRN4PQ13434 485 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms