RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 AEBP2Q6ZN18 517 aaPredicted RBP9.01□□□□□ -0.97
CCDC178-213ENST00000583930 CHIC1Q5VXU3 224 aa8.89□□□□□ -0.99
CCDC178-213ENST00000583930 PHF23Q9BUL5 403 aaPredicted RBP8□□□□□ -1.13
CCDC178-213ENST00000583930 POTEDQ86YR6 584 aa7.82□□□□□ -1.16
CCDC178-213ENST00000583930 NISCHQ9Y2I1 1504 aa7.8□□□□□ -1.16
CCDC178-213ENST00000583930 SENP3Q9H4L4 574 aaPredicted RBP7.53□□□□□ -1.2
CCDC178-213ENST00000583930 PLPPR3Q6T4P5 718 aa7.3□□□□□ -1.24
CCDC178-213ENST00000583930 CCDC180Q9P1Z9 1646 aa7.22□□□□□ -1.25
CCDC178-213ENST00000583930 ADRA2BP18089 450 aa7.12□□□□□ -1.27
CCDC178-213ENST00000583930 FOXD1Q16676 465 aa7.07□□□□□ -1.28
CCDC178-213ENST00000583930 PPP6R1Q9UPN7 881 aa7.04□□□□□ -1.28
CCDC178-213ENST00000583930 KCNA4P22459 653 aa6.86□□□□□ -1.31
CCDC178-213ENST00000583930 EHMT2Q96KQ7 1210 aa6.83□□□□□ -1.32
CCDC178-213ENST00000583930 MYO15BQ96JP2 1530 aa6.82□□□□□ -1.32
CCDC178-213ENST00000583930 MSH5O43196 834 aa6.8□□□□□ -1.32
CCDC178-213ENST00000583930 DCAF1Q9Y4B6 1507 aa6.77□□□□□ -1.33
CCDC178-213ENST00000583930 PIAS4Q8N2W9 510 aaPredicted RBP6.63□□□□□ -1.35
CCDC178-213ENST00000583930 ZCCHC6Q5VYS8 1495 aaKnown RBP6.59□□□□□ -1.35
CCDC178-213ENST00000583930 NACADO15069 1562 aa6.59□□□□□ -1.35
CCDC178-213ENST00000583930 SHROOM4Q9ULL8 1493 aa6.57□□□□□ -1.36
CCDC178-213ENST00000583930 PPP4R3CPQ6ZMV5 832 aa6.56□□□□□ -1.36
CCDC178-213ENST00000583930 CSRNP3Q8WYN3 585 aa6.5□□□□□ -1.37
CCDC178-213ENST00000583930 RB1CC1Q8TDY2 1594 aa6.49□□□□□ -1.37
CCDC178-213ENST00000583930 SLC4A1APQ9BWU0 796 aaKnown RBP6.48□□□□□ -1.37
CCDC178-213ENST00000583930 UNC13AQ9UPW8 1703 aa6.46□□□□□ -1.37
CCDC178-213ENST00000583930 NPM3O75607 178 aaKnown RBP6.41□□□□□ -1.38
CCDC178-213ENST00000583930 ZBTB22O15209 634 aa6.36□□□□□ -1.39
CCDC178-213ENST00000583930 MAPK8IP2Q13387 824 aaPredicted RBP6.35□□□□□ -1.39
CCDC178-213ENST00000583930 BICRAQ9NZM4 1560 aa6.32□□□□□ -1.4
CCDC178-213ENST00000583930 NCBP3Q53F19 620 aaKnown RBP6.3□□□□□ -1.4
CCDC178-213ENST00000583930 ABCC9O60706 1549 aa6.26□□□□□ -1.41
CCDC178-213ENST00000583930 PEG3Q9GZU2 1588 aa6.24□□□□□ -1.41
CCDC178-213ENST00000583930 CNKSR2Q8WXI2 1034 aa6.21□□□□□ -1.42
CCDC178-213ENST00000583930 CACNB1Q02641 598 aaPredicted RBP6.16□□□□□ -1.42
CCDC178-213ENST00000583930 SMARCA2P51531 1590 aa6.15□□□□□ -1.43
CCDC178-213ENST00000583930 SCAF1Q9H7N4 1312 aaKnown RBP6.12□□□□□ -1.43
CCDC178-213ENST00000583930 HMGXB3Q12766 1538 aa6.1□□□□□ -1.43
CCDC178-213ENST00000583930 SCRIBQ14160 1630 aa6.1□□□□□ -1.43
CCDC178-213ENST00000583930 PRDM2Q13029 1718 aa6.07□□□□□ -1.44
CCDC178-213ENST00000583930 SMARCA4P51532 1647 aa6.07□□□□□ -1.44
CCDC178-213ENST00000583930 BAZ1AQ9NRL2 1556 aaPredicted RBP6.06□□□□□ -1.44
CCDC178-213ENST00000583930 FOXD4L1Q9NU39 408 aa6.06□□□□□ -1.44
CCDC178-213ENST00000583930 EIF4G1Q04637 1599 aaKnown RBP6.05□□□□□ -1.44
CCDC178-213ENST00000583930 SLC4A2P04920 1241 aa6.02□□□□□ -1.45
CCDC178-213ENST00000583930 RNF216Q9NWF9 866 aaPredicted RBP6□□□□□ -1.45
CCDC178-213ENST00000583930 NCAPD3P42695 1498 aa5.99□□□□□ -1.45
CCDC178-213ENST00000583930 CC2D2AQ9P2K1 1620 aa5.96□□□□□ -1.46
CCDC178-213ENST00000583930 TOP2AP11388 1531 aaKnown RBP5.95□□□□□ -1.46
CCDC178-213ENST00000583930 DMRT2Q9Y5R5 561 aa5.94□□□□□ -1.46
CCDC178-213ENST00000583930 RTN4Q9NQC3 1192 aaKnown RBP5.93□□□□□ -1.46
CCDC178-213ENST00000583930 HOXD11P31277 338 aaPredicted RBP5.91□□□□□ -1.46
CCDC178-213ENST00000583930 ATAD2BQ9ULI0 1458 aa5.9□□□□□ -1.46
CCDC178-213ENST00000583930 MROH2BQ7Z745 1585 aa5.88□□□□□ -1.47
CCDC178-213ENST00000583930 DCAF8L1A6NGE4 600 aa5.88□□□□□ -1.47
CCDC178-213ENST00000583930 WDR97A6NE52 1622 aa5.88□□□□□ -1.47
CCDC178-213ENST00000583930 LAMC3Q9Y6N6 1575 aa5.88□□□□□ -1.47
CCDC178-213ENST00000583930 ATF5Q9Y2D1 282 aaPredicted RBP5.87□□□□□ -1.47
CCDC178-213ENST00000583930 FKBP8Q14318 412 aa5.87□□□□□ -1.47
CCDC178-213ENST00000583930 POTEHQ6S545 545 aa5.87□□□□□ -1.47
CCDC178-213ENST00000583930 RSF1Q96T23 1441 aaPredicted RBP5.84□□□□□ -1.47
CCDC178-213ENST00000583930 DNAJC5BQ9UF47 199 aa5.84□□□□□ -1.47
CCDC178-213ENST00000583930 WIZO95785 1651 aa5.84□□□□□ -1.47
CCDC178-213ENST00000583930 CECR2Q9BXF3 1484 aa5.83□□□□□ -1.48
CCDC178-213ENST00000583930 BAZ1BQ9UIG0 1483 aaKnown RBP5.79□□□□□ -1.48
CCDC178-213ENST00000583930 MYCNP04198 464 aaPredicted RBP5.79□□□□□ -1.48
CCDC178-213ENST00000583930 THOC2Q8NI27 1593 aaKnown RBP5.78□□□□□ -1.48
CCDC178-213ENST00000583930 BIVM-ERCC5R4GMW8 1640 aa5.77□□□□□ -1.49
CCDC178-213ENST00000583930 CFTRP13569 1480 aa5.77□□□□□ -1.49
CCDC178-213ENST00000583930 WDR62O43379 1518 aa5.75□□□□□ -1.49
CCDC178-213ENST00000583930 RNF39Q9H2S5 420 aa5.74□□□□□ -1.49
CCDC178-213ENST00000583930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.73□□□□□ -1.49
CCDC178-213ENST00000583930 KIF21AQ7Z4S6 1674 aa5.72□□□□□ -1.49
CCDC178-213ENST00000583930 SLC24A1O60721 1099 aa5.71□□□□□ -1.49
CCDC178-213ENST00000583930 ABCC8Q09428 1581 aa5.71□□□□□ -1.49
CCDC178-213ENST00000583930 U3KPZ7 1027 aaPredicted RBP5.7□□□□□ -1.5
CCDC178-213ENST00000583930 CUX2O14529 1486 aa5.7□□□□□ -1.5
CCDC178-213ENST00000583930 CCDC88BA6NC98 1476 aa5.68□□□□□ -1.5
CCDC178-213ENST00000583930 DNMBPQ6XZF7 1577 aa5.68□□□□□ -1.5
CCDC178-213ENST00000583930 AMER1Q5JTC6 1135 aaPredicted RBP5.67□□□□□ -1.5
CCDC178-213ENST00000583930 TOP2BQ02880 1626 aa5.67□□□□□ -1.5
CCDC178-213ENST00000583930 ATXN8OSP0DMR3 200 aa5.66□□□□□ -1.5
CCDC178-213ENST00000583930 TARBP1Q13395 1621 aaKnown RBP5.65□□□□□ -1.5
CCDC178-213ENST00000583930 CADPSQ9ULU8 1353 aa5.65□□□□□ -1.51
CCDC178-213ENST00000583930 C1QBPQ07021 282 aaKnown RBP5.64□□□□□ -1.51
CCDC178-213ENST00000583930 PABPN1Q86U42 306 aaKnown RBP eCLIP5.63□□□□□ -1.51
CCDC178-213ENST00000583930 ABCA5Q8WWZ7 1642 aa5.63□□□□□ -1.51
CCDC178-213ENST00000583930 MRC2Q9UBG0 1479 aa5.63□□□□□ -1.51
CCDC178-213ENST00000583930 PDS5BQ9NTI5 1447 aa5.62□□□□□ -1.51
CCDC178-213ENST00000583930 PBRM1Q86U86 1689 aa5.59□□□□□ -1.52
CCDC178-213ENST00000583930 CEP164Q9UPV0 1460 aa5.58□□□□□ -1.52
CCDC178-213ENST00000583930 CUL7Q14999 1698 aa5.57□□□□□ -1.52
CCDC178-213ENST00000583930 FANCD2Q9BXW9 1451 aa5.57□□□□□ -1.52
CCDC178-213ENST00000583930 URB2Q14146 1524 aaKnown RBP5.57□□□□□ -1.52
CCDC178-213ENST00000583930 SPINK5Q9NQ38 1064 aaPredicted RBP5.56□□□□□ -1.52
CCDC178-213ENST00000583930 CUX1P39880 1505 aa5.56□□□□□ -1.52
CCDC178-213ENST00000583930 ABCA10Q8WWZ4 1543 aa5.56□□□□□ -1.52
CCDC178-213ENST00000583930 TOPBP1Q92547 1522 aa5.56□□□□□ -1.52
CCDC178-213ENST00000583930 ZNF219Q9P2Y4 722 aaPredicted RBP5.56□□□□□ -1.52
CCDC178-213ENST00000583930 DCAF8L2P0C7V8 631 aa5.56□□□□□ -1.52
CCDC178-213ENST00000583930 MKRN4PQ13434 485 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms